RNA–Protein interactions for RNA: ENST00000611976.1

CDC42EP3-206, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CDC42EP3, Length 5,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-206ENST00000611976 BTBD18B2RXH4 712 aa12.2□□□□□ -0.46
CDC42EP3-206ENST00000611976 RFC4P35249 363 aa12.2□□□□□ -0.46
CDC42EP3-206ENST00000611976 ST5P78524 1137 aa12.2□□□□□ -0.46
CDC42EP3-206ENST00000611976 RAPGEF1Q13905 1077 aa12.2□□□□□ -0.46
CDC42EP3-206ENST00000611976 LONRF3Q496Y0 759 aa12.2□□□□□ -0.46
CDC42EP3-206ENST00000611976 PPP4R3AQ6IN85 833 aa12.2□□□□□ -0.46
CDC42EP3-206ENST00000611976 CCDC77Q9BR77 488 aa12.2□□□□□ -0.46
CDC42EP3-206ENST00000611976 MTRF1LQ9UGC7 380 aaKnown RBP12.2□□□□□ -0.46
CDC42EP3-206ENST00000611976 CDC23Q9UJX2 597 aa12.2□□□□□ -0.46
CDC42EP3-206ENST00000611976 M0R2C6 588 aa12.2□□□□□ -0.46
CDC42EP3-206ENST00000611976 GTPBP6O43824 516 aaPredicted RBP12.2□□□□□ -0.46
CDC42EP3-206ENST00000611976 CCNT1O60563 726 aaKnown RBP12.2□□□□□ -0.46
CDC42EP3-206ENST00000611976 PRDM1O75626 825 aa12.2□□□□□ -0.46
CDC42EP3-206ENST00000611976 PTPN12Q05209 780 aaKnown RBP12.2□□□□□ -0.46
CDC42EP3-206ENST00000611976 PAK2Q13177 524 aa12.2□□□□□ -0.46
CDC42EP3-206ENST00000611976 TPTE2Q6XPS3 522 aa12.2□□□□□ -0.46
CDC42EP3-206ENST00000611976 CERS3Q8IU89 383 aa12.2□□□□□ -0.46
CDC42EP3-206ENST00000611976 NAP1L3Q99457 506 aaPredicted RBP12.2□□□□□ -0.46
CDC42EP3-206ENST00000611976 H7C1D1 291 aa12.19□□□□□ -0.46
CDC42EP3-206ENST00000611976 MAGEA1P43355 309 aa12.19□□□□□ -0.46
CDC42EP3-206ENST00000611976 NCBP1Q09161 790 aaKnown RBP12.19□□□□□ -0.46
CDC42EP3-206ENST00000611976 DDB1Q16531 1140 aa12.19□□□□□ -0.46
CDC42EP3-206ENST00000611976 CCDC174Q6PII3 467 aa12.19□□□□□ -0.46
CDC42EP3-206ENST00000611976 APOA5Q6Q788 366 aa12.19□□□□□ -0.46
CDC42EP3-206ENST00000611976 GOLGA5Q8TBA6 731 aa12.19□□□□□ -0.46
CDC42EP3-206ENST00000611976 IPO4Q8TEX9 1081 aaKnown RBP12.19□□□□□ -0.46
CDC42EP3-206ENST00000611976 CCDC114Q96M63 670 aa12.19□□□□□ -0.46
CDC42EP3-206ENST00000611976 GSDMAQ96QA5 445 aa12.19□□□□□ -0.46
CDC42EP3-206ENST00000611976 CDC42BPGQ6DT37 1551 aa12.19□□□□□ -0.46
CDC42EP3-206ENST00000611976 ZNF827Q17R98 1081 aa12.19□□□□□ -0.46
CDC42EP3-206ENST00000611976 TTLL7Q6ZT98 887 aa12.19□□□□□ -0.46
CDC42EP3-206ENST00000611976 HS2ST1Q7LGA3 356 aa12.19□□□□□ -0.46
CDC42EP3-206ENST00000611976 VSTM4Q8IW00 320 aa12.19□□□□□ -0.46
CDC42EP3-206ENST00000611976 TRIM58Q8NG06 486 aa12.19□□□□□ -0.46
CDC42EP3-206ENST00000611976 FAM71BQ8TC56 605 aa12.19□□□□□ -0.46
CDC42EP3-206ENST00000611976 ZBTB9Q96C00 473 aa12.19□□□□□ -0.46
CDC42EP3-206ENST00000611976 LRRC45Q96CN5 670 aa12.19□□□□□ -0.46
CDC42EP3-206ENST00000611976 ANKARQ7Z5J8 1434 aa12.19□□□□□ -0.46
CDC42EP3-206ENST00000611976 INO80Q9ULG1 1556 aaPredicted RBP12.19□□□□□ -0.46
CDC42EP3-206ENST00000611976 FMNL1O95466 1100 aaPredicted RBP12.19□□□□□ -0.46
CDC42EP3-206ENST00000611976 DNM2P50570 870 aa12.19□□□□□ -0.46
CDC42EP3-206ENST00000611976 CFAP221Q4G0U5 840 aa12.19□□□□□ -0.46
CDC42EP3-206ENST00000611976 AEBP2Q6ZN18 517 aaPredicted RBP12.19□□□□□ -0.46
CDC42EP3-206ENST00000611976 ZSCAN10Q96SZ4 725 aaPredicted RBP12.19□□□□□ -0.46
CDC42EP3-206ENST00000611976 RPAP1Q9BWH6 1393 aaPredicted RBP12.19□□□□□ -0.46
CDC42EP3-206ENST00000611976 ABCA9Q8IUA7 1624 aa12.19□□□□□ -0.46
CDC42EP3-206ENST00000611976 ZC3H13Q5T200 1668 aaKnown RBP12.19□□□□□ -0.46
CDC42EP3-206ENST00000611976 HIBADHP31937 336 aaKnown RBP12.19□□□□□ -0.46
CDC42EP3-206ENST00000611976 ARHGEF25Q86VW2 580 aa12.19□□□□□ -0.46
CDC42EP3-206ENST00000611976 DNAJC10Q8IXB1 793 aa12.19□□□□□ -0.46
CDC42EP3-206ENST00000611976 INPP5BP32019 993 aa12.18□□□□□ -0.46
CDC42EP3-206ENST00000611976 SLFNL1Q499Z3 407 aa12.18□□□□□ -0.46
CDC42EP3-206ENST00000611976 CABP7Q86V35 215 aa12.18□□□□□ -0.46
CDC42EP3-206ENST00000611976 SELENOSQ9BQE4 189 aa12.18□□□□□ -0.46
CDC42EP3-206ENST00000611976 BPIFA3Q9BQP9 254 aa12.18□□□□□ -0.46
CDC42EP3-206ENST00000611976 CAMSAP1Q5T5Y3 1602 aa12.18□□□□□ -0.46
CDC42EP3-206ENST00000611976 SPDYE3A6NKU9 549 aa12.18□□□□□ -0.46
CDC42EP3-206ENST00000611976 FAM13AO94988 1023 aa12.18□□□□□ -0.46
CDC42EP3-206ENST00000611976 CTNNA2P26232 953 aa12.18□□□□□ -0.46
CDC42EP3-206ENST00000611976 MRPL12P52815 198 aaKnown RBP12.18□□□□□ -0.46
CDC42EP3-206ENST00000611976 ASIC2Q16515 512 aa12.18□□□□□ -0.46
CDC42EP3-206ENST00000611976 SMARCC2Q8TAQ2 1214 aa12.18□□□□□ -0.46
CDC42EP3-206ENST00000611976 STAMQ92783 540 aa12.18□□□□□ -0.46
CDC42EP3-206ENST00000611976 IFIH1Q9BYX4 1025 aaKnown RBP12.18□□□□□ -0.46
CDC42EP3-206ENST00000611976 PXDNLA1KZ92 1463 aa12.18□□□□□ -0.46
CDC42EP3-206ENST00000611976 SND1Q7KZF4 910 aaKnown RBP eCLIP12.18□□□□□ -0.46
CDC42EP3-206ENST00000611976 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.18□□□□□ -0.46
CDC42EP3-206ENST00000611976 UBLCP1Q8WVY7 318 aaPredicted RBP12.18□□□□□ -0.46
CDC42EP3-206ENST00000611976 ACSBG1Q96GR2 724 aa12.18□□□□□ -0.46
CDC42EP3-206ENST00000611976 ATP10DQ9P241 1426 aa12.18□□□□□ -0.46
CDC42EP3-206ENST00000611976 ARHGAP25P42331 645 aa12.18□□□□□ -0.46
CDC42EP3-206ENST00000611976 PGBD1Q96JS3 809 aa12.18□□□□□ -0.46
CDC42EP3-206ENST00000611976 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.18□□□□□ -0.46
CDC42EP3-206ENST00000611976 DLC1Q96QB1 1528 aa12.17□□□□□ -0.46
CDC42EP3-206ENST00000611976 NRXN1Q9ULB1 1477 aa12.17□□□□□ -0.46
CDC42EP3-206ENST00000611976 TNKSO95271 1327 aa12.17□□□□□ -0.46
CDC42EP3-206ENST00000611976 DDAH1O94760 285 aa12.17□□□□□ -0.46
CDC42EP3-206ENST00000611976 ENOX1Q8TC92 643 aaKnown RBP12.17□□□□□ -0.46
CDC42EP3-206ENST00000611976 SAMD15Q9P1V8 674 aa12.17□□□□□ -0.46
CDC42EP3-206ENST00000611976 ARPP21Q9UBL0 812 aaPredicted RBP12.17□□□□□ -0.46
CDC42EP3-206ENST00000611976 ARHGEF40Q8TER5 1519 aa12.17□□□□□ -0.46
CDC42EP3-206ENST00000611976 USP42Q9H9J4 1324 aaKnown RBP12.17□□□□□ -0.46
CDC42EP3-206ENST00000611976 PCP11498 1178 aaKnown RBP12.17□□□□□ -0.46
CDC42EP3-206ENST00000611976 UBE4AQ14139 1066 aa12.17□□□□□ -0.46
CDC42EP3-206ENST00000611976 RUFY4Q6ZNE9 571 aa12.17□□□□□ -0.46
CDC42EP3-206ENST00000611976 GLT8D2Q9H1C3 349 aa12.17□□□□□ -0.46
CDC42EP3-206ENST00000611976 LRWD1Q9UFC0 647 aa12.17□□□□□ -0.46
CDC42EP3-206ENST00000611976 SWAP70Q9UH65 585 aa12.17□□□□□ -0.46
CDC42EP3-206ENST00000611976 NRKQ7Z2Y5 1582 aa12.17□□□□□ -0.46
CDC42EP3-206ENST00000611976 A0A1W2PRG0 241 aa12.17□□□□□ -0.46
CDC42EP3-206ENST00000611976 EPB41P11171 864 aaKnown RBP12.17□□□□□ -0.46
CDC42EP3-206ENST00000611976 PICALMQ13492 652 aa12.17□□□□□ -0.46
CDC42EP3-206ENST00000611976 PTPRMP28827 1452 aa12.16□□□□□ -0.46
CDC42EP3-206ENST00000611976 CETN3O15182 167 aa12.16□□□□□ -0.46
CDC42EP3-206ENST00000611976 ARID4AP29374 1257 aaPredicted RBP12.16□□□□□ -0.46
CDC42EP3-206ENST00000611976 CLCN6P51797 869 aa12.16□□□□□ -0.46
CDC42EP3-206ENST00000611976 HAUS3Q68CZ6 603 aa12.16□□□□□ -0.46
CDC42EP3-206ENST00000611976 FBXO38Q6PIJ6 1188 aa12.16□□□□□ -0.46
CDC42EP3-206ENST00000611976 SYMPKQ92797 1274 aaKnown RBP12.16□□□□□ -0.46
CDC42EP3-206ENST00000611976 RNF26Q9BY78 433 aaPredicted RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms