RNA–Protein interactions for RNA: ENST00000608903.5

CTCFL-221, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-221ENST00000608903 PPFIA3O75145 1194 aa13.55□□□□□ -0.24
CTCFL-221ENST00000608903 NFXL1Q6ZNB6 911 aa13.55□□□□□ -0.24
CTCFL-221ENST00000608903 RASGRP2Q7LDG7 609 aa13.55□□□□□ -0.24
CTCFL-221ENST00000608903 CCDC144CPQ8IYA2 1237 aa13.55□□□□□ -0.24
CTCFL-221ENST00000608903 TMEM47Q9BQJ4 181 aa13.55□□□□□ -0.24
CTCFL-221ENST00000608903 MTMR4Q9NYA4 1195 aa13.55□□□□□ -0.24
CTCFL-221ENST00000608903 GOLGA8BA8MQT2 603 aa13.54□□□□□ -0.24
CTCFL-221ENST00000608903 SEPT2Q15019 361 aa13.54□□□□□ -0.24
CTCFL-221ENST00000608903 SART3Q15020 963 aaKnown RBP13.54□□□□□ -0.24
CTCFL-221ENST00000608903 EAPPQ56P03 285 aaPredicted RBP13.54□□□□□ -0.24
CTCFL-221ENST00000608903 IFIT1BQ5T764 474 aaKnown RBP13.54□□□□□ -0.24
CTCFL-221ENST00000608903 DGKHQ86XP1 1220 aa13.54□□□□□ -0.24
CTCFL-221ENST00000608903 ZNF654Q8IZM8 581 aa13.54□□□□□ -0.24
CTCFL-221ENST00000608903 CCDC17Q96LX7 622 aa13.54□□□□□ -0.24
CTCFL-221ENST00000608903 ERICH2A1L162 156 aa13.54□□□□□ -0.24
CTCFL-221ENST00000608903 CCDC69A6NI79 296 aa13.54□□□□□ -0.24
CTCFL-221ENST00000608903 MPHOSPH10O00566 681 aaKnown RBP13.54□□□□□ -0.24
CTCFL-221ENST00000608903 JAK2O60674 1132 aa13.54□□□□□ -0.24
CTCFL-221ENST00000608903 GH2P01242 217 aa13.54□□□□□ -0.24
CTCFL-221ENST00000608903 ADD1P35611 737 aaKnown RBP13.54□□□□□ -0.24
CTCFL-221ENST00000608903 TROAPQ12815 778 aa13.54□□□□□ -0.24
CTCFL-221ENST00000608903 USP48Q86UV5 1035 aa13.54□□□□□ -0.24
CTCFL-221ENST00000608903 MICU3Q86XE3 530 aa13.54□□□□□ -0.24
CTCFL-221ENST00000608903 NMRK2Q9NPI5 230 aa13.54□□□□□ -0.24
CTCFL-221ENST00000608903 SLC12A7Q9Y666 1083 aa13.54□□□□□ -0.24
CTCFL-221ENST00000608903 IQCA1LA6NCM1 817 aa13.53□□□□□ -0.24
CTCFL-221ENST00000608903 NT5C2P49902 561 aa13.53□□□□□ -0.24
CTCFL-221ENST00000608903 ABCB5Q2M3G0 1257 aa13.53□□□□□ -0.24
CTCFL-221ENST00000608903 TMTC2Q8N394 836 aa13.53□□□□□ -0.24
CTCFL-221ENST00000608903 DCPSQ96C86 337 aaKnown RBP13.53□□□□□ -0.24
CTCFL-221ENST00000608903 CHMP4CQ96CF2 233 aa13.53□□□□□ -0.24
CTCFL-221ENST00000608903 INTS4Q96HW7 963 aaKnown RBP13.53□□□□□ -0.24
CTCFL-221ENST00000608903 TRIM34Q9BYJ4 488 aa13.53□□□□□ -0.24
CTCFL-221ENST00000608903 TAOK2Q9UL54 1235 aa13.53□□□□□ -0.24
CTCFL-221ENST00000608903 ZBTB43O43298 467 aa13.52□□□□□ -0.24
CTCFL-221ENST00000608903 FMR1Q06787 632 aaKnown RBP eCLIP13.52□□□□□ -0.249e-8■■□□□ 14.3
CTCFL-221ENST00000608903 KRT26Q7Z3Y9 468 aa13.52□□□□□ -0.24
CTCFL-221ENST00000608903 CCDC84Q86UT8 332 aaPredicted RBP13.52□□□□□ -0.24
CTCFL-221ENST00000608903 NSUN7Q8NE18 718 aaKnown RBP13.52□□□□□ -0.24
CTCFL-221ENST00000608903 ZC3H15Q8WU90 426 aaKnown RBP13.52□□□□□ -0.24
CTCFL-221ENST00000608903 GLIS2Q9BZE0 524 aaPredicted RBP13.52□□□□□ -0.24
CTCFL-221ENST00000608903 STX8Q9UNK0 236 aa13.52□□□□□ -0.24
CTCFL-221ENST00000608903 INPP5BP32019 993 aa13.52□□□□□ -0.25
CTCFL-221ENST00000608903 CAP2P40123 477 aa13.52□□□□□ -0.25
CTCFL-221ENST00000608903 NTRK3Q16288 839 aa13.52□□□□□ -0.25
CTCFL-221ENST00000608903 ZNF526Q8TF50 670 aaPredicted RBP13.52□□□□□ -0.25
CTCFL-221ENST00000608903 NUP133Q8WUM0 1156 aa13.52□□□□□ -0.25
CTCFL-221ENST00000608903 CLIP2Q9UDT6 1046 aa13.52□□□□□ -0.25
CTCFL-221ENST00000608903 ZNF112Q9UJU3 913 aa13.52□□□□□ -0.25
CTCFL-221ENST00000608903 PPP2R3BQ9Y5P8 575 aa13.52□□□□□ -0.25
CTCFL-221ENST00000608903 NID2Q14112 1375 aa13.51□□□□□ -0.25
CTCFL-221ENST00000608903 A0A1W2PRG0 241 aa13.51□□□□□ -0.25
CTCFL-221ENST00000608903 UBE2Q2LH0YL09 131 aa13.51□□□□□ -0.25
CTCFL-221ENST00000608903 EEF2P13639 858 aaKnown RBP13.51□□□□□ -0.25
CTCFL-221ENST00000608903 METAP2P50579 478 aaKnown RBP eCLIP13.51□□□□□ -0.253e-6■□□□□ 9.1
CTCFL-221ENST00000608903 SLC35G1Q2M3R5 365 aa13.51□□□□□ -0.25
CTCFL-221ENST00000608903 CMTR1Q8N1G2 835 aaKnown RBP13.51□□□□□ -0.25
CTCFL-221ENST00000608903 LRRC47Q8N1G4 583 aaKnown RBP13.51□□□□□ -0.25
CTCFL-221ENST00000608903 PNMA1Q8ND90 353 aa13.51□□□□□ -0.25
CTCFL-221ENST00000608903 ZBTB21Q9ULJ3 1066 aa13.51□□□□□ -0.25
CTCFL-221ENST00000608903 MYH4Q9Y623 1939 aa13.51□□□□□ -0.25
CTCFL-221ENST00000608903 GOLGA8AA7E2F4 631 aa13.51□□□□□ -0.25
CTCFL-221ENST00000608903 USP2O75604 605 aaPredicted RBP13.51□□□□□ -0.25
CTCFL-221ENST00000608903 FDPSP14324 419 aaKnown RBP13.51□□□□□ -0.25
CTCFL-221ENST00000608903 VEGFAP15692 232 aaPredicted RBP13.51□□□□□ -0.25
CTCFL-221ENST00000608903 PKP1Q13835 747 aa13.51□□□□□ -0.25
CTCFL-221ENST00000608903 TMEM179Q6ZVK1 233 aa13.51□□□□□ -0.25
CTCFL-221ENST00000608903 SULF1Q8IWU6 871 aa13.51□□□□□ -0.25
CTCFL-221ENST00000608903 FANCBQ8NB91 859 aa13.51□□□□□ -0.25
CTCFL-221ENST00000608903 SMARCC2Q8TAQ2 1214 aa13.51□□□□□ -0.25
CTCFL-221ENST00000608903 CHMP5Q9NZZ3 219 aa13.51□□□□□ -0.25
CTCFL-221ENST00000608903 ATAD5Q96QE3 1844 aa13.51□□□□□ -0.25
CTCFL-221ENST00000608903 DCAF8L1A6NGE4 600 aa13.5□□□□□ -0.25
CTCFL-221ENST00000608903 HSP90AA1P07900 732 aaKnown RBP13.5□□□□□ -0.25
CTCFL-221ENST00000608903 TOP1P11387 765 aaKnown RBP13.5□□□□□ -0.25
CTCFL-221ENST00000608903 FUT2Q10981 343 aa13.5□□□□□ -0.25
CTCFL-221ENST00000608903 PRKG1Q13976 671 aa13.5□□□□□ -0.25
CTCFL-221ENST00000608903 RAB3GAP1Q15042 981 aa13.5□□□□□ -0.25
CTCFL-221ENST00000608903 CCDC178Q5BJE1 867 aa13.5□□□□□ -0.25
CTCFL-221ENST00000608903 MAP1SQ66K74 1059 aaPredicted RBP13.5□□□□□ -0.25
CTCFL-221ENST00000608903 CATIPQ7Z7H3 387 aa13.5□□□□□ -0.25
CTCFL-221ENST00000608903 PNMA8AQ86V59 439 aaPredicted RBP13.5□□□□□ -0.25
CTCFL-221ENST00000608903 STAG2Q8N3U4 1231 aa13.5□□□□□ -0.25
CTCFL-221ENST00000608903 ACER1Q8TDN7 264 aa13.5□□□□□ -0.25
CTCFL-221ENST00000608903 CDCA5Q96FF9 252 aa13.5□□□□□ -0.25
CTCFL-221ENST00000608903 KAT14Q9H8E8 782 aa13.5□□□□□ -0.25
CTCFL-221ENST00000608903 MTMR7Q9Y216 660 aa13.5□□□□□ -0.25
CTCFL-221ENST00000608903 DDAH1O94760 285 aa13.49□□□□□ -0.25
CTCFL-221ENST00000608903 PLEKHA8P1O95397 391 aa13.49□□□□□ -0.25
CTCFL-221ENST00000608903 TTLL1O95922 423 aa13.49□□□□□ -0.25
CTCFL-221ENST00000608903 GJB2P29033 226 aa13.49□□□□□ -0.25
CTCFL-221ENST00000608903 KIAA1755Q5JYT7 1200 aa13.49□□□□□ -0.25
CTCFL-221ENST00000608903 NBPF11Q86T75 865 aa13.49□□□□□ -0.25
CTCFL-221ENST00000608903 ZKSCAN4Q969J2 545 aaPredicted RBP13.49□□□□□ -0.25
CTCFL-221ENST00000608903 MKL1Q969V6 931 aa13.49□□□□□ -0.25
CTCFL-221ENST00000608903 DDX11Q96FC9 970 aa13.49□□□□□ -0.25
CTCFL-221ENST00000608903 KANSL2Q9H9L4 492 aa13.49□□□□□ -0.25
CTCFL-221ENST00000608903 NYAP2Q9P242 653 aa13.49□□□□□ -0.25
CTCFL-221ENST00000608903 USP17L5A8MUK1 530 aa13.49□□□□□ -0.25
CTCFL-221ENST00000608903 TRAF5O00463 557 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms