RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 GTF3C3Q9Y5Q9 886 aa16.9■□□□□ 0.3
CTSA-219ENST00000607841 BAZ2AQ9UIF9 1905 aaKnown RBP16.9■□□□□ 0.3
CTSA-219ENST00000607841 TSPY2A6NKD2 308 aa16.89■□□□□ 0.29
CTSA-219ENST00000607841 GUCY1A2P33402 732 aa16.89■□□□□ 0.29
CTSA-219ENST00000607841 USP14P54578 494 aa16.89■□□□□ 0.29
CTSA-219ENST00000607841 TFAP4Q01664 338 aa16.89■□□□□ 0.29
CTSA-219ENST00000607841 ICA1Q05084 483 aa16.89■□□□□ 0.29
CTSA-219ENST00000607841 MTMR2Q13614 643 aa16.89■□□□□ 0.29
CTSA-219ENST00000607841 SH3D19Q5HYK7 790 aa16.89■□□□□ 0.29
CTSA-219ENST00000607841 PPP4R3BQ5MIZ7 849 aa16.89■□□□□ 0.29
CTSA-219ENST00000607841 PROCA1Q8NCQ7 364 aaPredicted RBP16.89■□□□□ 0.29
CTSA-219ENST00000607841 PTPN18Q99952 460 aa16.89■□□□□ 0.29
CTSA-219ENST00000607841 SH2D4AQ9H788 454 aa16.89■□□□□ 0.29
CTSA-219ENST00000607841 RNF186Q9NXI6 227 aa16.89■□□□□ 0.29
CTSA-219ENST00000607841 DOCK1Q14185 1865 aa16.88■□□□□ 0.29
CTSA-219ENST00000607841 IGF2BP3O00425 579 aaKnown RBP eCLIP16.88■□□□□ 0.29
CTSA-219ENST00000607841 RANBP6O60518 1105 aaKnown RBP16.88■□□□□ 0.29
CTSA-219ENST00000607841 TRPA1O75762 1119 aa16.88■□□□□ 0.29
CTSA-219ENST00000607841 HSPA1AP0DMV8 641 aaKnown RBP16.88■□□□□ 0.29
CTSA-219ENST00000607841 HSPA1BP0DMV9 641 aaKnown RBP16.88■□□□□ 0.29
CTSA-219ENST00000607841 USP17L2Q6R6M4 530 aa16.88■□□□□ 0.29
CTSA-219ENST00000607841 GADL1Q6ZQY3 521 aa16.88■□□□□ 0.29
CTSA-219ENST00000607841 ANKRD23Q86SG2 305 aa16.88■□□□□ 0.29
CTSA-219ENST00000607841 TNS4Q8IZW8 715 aa16.88■□□□□ 0.29
CTSA-219ENST00000607841 NEDD1Q8NHV4 660 aa16.88■□□□□ 0.29
CTSA-219ENST00000607841 LSG1Q9H089 658 aaKnown RBP16.88■□□□□ 0.29
CTSA-219ENST00000607841 KIAA1683Q9H0B3 1180 aa16.88■□□□□ 0.29
CTSA-219ENST00000607841 BTBD19C9JJ37 291 aa16.87■□□□□ 0.29
CTSA-219ENST00000607841 HMGCS2P54868 508 aa16.87■□□□□ 0.29
CTSA-219ENST00000607841 PABPC4Q13310 644 aaKnown RBP eCLIP16.87■□□□□ 0.29
CTSA-219ENST00000607841 FAM47AQ5JRC9 791 aa16.87■□□□□ 0.29
CTSA-219ENST00000607841 RRP12Q5JTH9 1297 aaKnown RBP16.87■□□□□ 0.29
CTSA-219ENST00000607841 TBC1D10CQ8IV04 446 aa16.87■□□□□ 0.29
CTSA-219ENST00000607841 ESR2Q92731 530 aa16.87■□□□□ 0.29
CTSA-219ENST00000607841 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.87■□□□□ 0.29
CTSA-219ENST00000607841 CNNM2Q9H8M5 875 aa16.87■□□□□ 0.29
CTSA-219ENST00000607841 INCENPQ9NQS7 918 aa16.87■□□□□ 0.29
CTSA-219ENST00000607841 SLC45A1Q9Y2W3 748 aa16.87■□□□□ 0.29
CTSA-219ENST00000607841 RBM8AQ9Y5S9 174 aaKnown RBP16.87■□□□□ 0.29
CTSA-219ENST00000607841 EIF5BO60841 1220 aaKnown RBP16.86■□□□□ 0.29
CTSA-219ENST00000607841 REC8O95072 547 aa16.86■□□□□ 0.29
CTSA-219ENST00000607841 ATP2B2Q01814 1243 aa16.86■□□□□ 0.29
CTSA-219ENST00000607841 TRDNQ13061 729 aa16.86■□□□□ 0.29
CTSA-219ENST00000607841 MOGSQ13724 837 aa16.86■□□□□ 0.29
CTSA-219ENST00000607841 FAM43AQ8N2R8 423 aa16.86■□□□□ 0.29
CTSA-219ENST00000607841 ACER1Q8TDN7 264 aa16.86■□□□□ 0.29
CTSA-219ENST00000607841 CFHR5Q9BXR6 569 aa16.86■□□□□ 0.29
CTSA-219ENST00000607841 KRT23Q9C075 422 aa16.86■□□□□ 0.29
CTSA-219ENST00000607841 NBPF3Q9H094 633 aa16.86■□□□□ 0.29
CTSA-219ENST00000607841 NYAP2Q9P242 653 aa16.86■□□□□ 0.29
CTSA-219ENST00000607841 AGTPBP1Q9UPW5 1226 aa16.86■□□□□ 0.29
CTSA-219ENST00000607841 PLIN4Q96Q06 1357 aa16.86■□□□□ 0.29
CTSA-219ENST00000607841 IGKV6D-41A0A0C4DH26 115 aa16.85■□□□□ 0.29
CTSA-219ENST00000607841 PDHXO00330 501 aa16.85■□□□□ 0.29
CTSA-219ENST00000607841 CYP21A2P08686 494 aa16.85■□□□□ 0.29
CTSA-219ENST00000607841 EEF2P13639 858 aaKnown RBP16.85■□□□□ 0.29
CTSA-219ENST00000607841 CTCFP49711 727 aaPredicted RBP16.85■□□□□ 0.29
CTSA-219ENST00000607841 RNF20Q5VTR2 975 aa16.85■□□□□ 0.29
CTSA-219ENST00000607841 GPAT2Q6NUI2 795 aa16.85■□□□□ 0.29
CTSA-219ENST00000607841 C12orf42Q96LP6 360 aa16.85■□□□□ 0.29
CTSA-219ENST00000607841 ZFYVE28Q9HCC9 887 aa16.85■□□□□ 0.29
CTSA-219ENST00000607841 MTMR4Q9NYA4 1195 aa16.85■□□□□ 0.29
CTSA-219ENST00000607841 PNMA3Q9UL41 463 aa16.85■□□□□ 0.29
CTSA-219ENST00000607841 TMX2Q9Y320 296 aa16.85■□□□□ 0.29
CTSA-219ENST00000607841 LAMB1P07942 1786 aa16.84■□□□□ 0.29
CTSA-219ENST00000607841 A0A1W2PRG0 241 aa16.84■□□□□ 0.29
CTSA-219ENST00000607841 TTLL1O95922 423 aa16.84■□□□□ 0.29
CTSA-219ENST00000607841 OSBPP22059 807 aa16.84■□□□□ 0.29
CTSA-219ENST00000607841 TAF1CQ15572 869 aaPredicted RBP16.84■□□□□ 0.29
CTSA-219ENST00000607841 ZYXQ15942 572 aaKnown RBP16.84■□□□□ 0.29
CTSA-219ENST00000607841 SIAH1Q8IUQ4 282 aa16.84■□□□□ 0.29
CTSA-219ENST00000607841 LPAR1Q92633 364 aa16.84■□□□□ 0.29
CTSA-219ENST00000607841 CEP95Q96GE4 821 aa16.84■□□□□ 0.29
CTSA-219ENST00000607841 PARK7Q99497 189 aaKnown RBP16.84■□□□□ 0.29
CTSA-219ENST00000607841 EMILIN3Q9NT22 766 aa16.84■□□□□ 0.29
CTSA-219ENST00000607841 TCP11L1Q9NUJ3 509 aa16.84■□□□□ 0.29
CTSA-219ENST00000607841 CLIP2Q9UDT6 1046 aa16.84■□□□□ 0.29
CTSA-219ENST00000607841 SYNPO2Q9UMS6 1093 aa16.84■□□□□ 0.29
CTSA-219ENST00000607841 TACC3Q9Y6A5 838 aa16.84■□□□□ 0.29
CTSA-219ENST00000607841 FOXN1O15353 648 aa16.83■□□□□ 0.28
CTSA-219ENST00000607841 EPB41L2O43491 1005 aaKnown RBP16.83■□□□□ 0.28
CTSA-219ENST00000607841 NECTIN1Q15223 517 aa16.83■□□□□ 0.28
CTSA-219ENST00000607841 CCDC178Q5BJE1 867 aa16.83■□□□□ 0.28
CTSA-219ENST00000607841 IQCA1Q86XH1 822 aa16.83■□□□□ 0.28
CTSA-219ENST00000607841 CLEC10AQ8IUN9 316 aa16.83■□□□□ 0.28
CTSA-219ENST00000607841 MKL1Q969V6 931 aa16.83■□□□□ 0.28
CTSA-219ENST00000607841 GOPCQ9HD26 462 aa16.83■□□□□ 0.28
CTSA-219ENST00000607841 STX8Q9UNK0 236 aa16.83■□□□□ 0.28
CTSA-219ENST00000607841 NEDD4P46934 1319 aa16.82■□□□□ 0.28
CTSA-219ENST00000607841 TBC1D8O95759 1140 aa16.82■□□□□ 0.28
CTSA-219ENST00000607841 HOXA7P31268 230 aaPredicted RBP16.82■□□□□ 0.28
CTSA-219ENST00000607841 CRHR2Q13324 411 aa16.82■□□□□ 0.28
CTSA-219ENST00000607841 TREML2Q5T2D2 321 aa16.82■□□□□ 0.28
CTSA-219ENST00000607841 CREB3L3Q68CJ9 461 aa16.82■□□□□ 0.28
CTSA-219ENST00000607841 RALYLQ86SE5 291 aaKnown RBP16.82■□□□□ 0.28
CTSA-219ENST00000607841 VCPKMTQ9H867 229 aa16.82■□□□□ 0.28
CTSA-219ENST00000607841 B4E1Z4 1266 aa16.81■□□□□ 0.28
CTSA-219ENST00000607841 USP17L15C9J2P7 530 aa16.81■□□□□ 0.28
CTSA-219ENST00000607841 USP17L13C9JLJ4 530 aa16.81■□□□□ 0.28
CTSA-219ENST00000607841 USP17L11C9JVI0 530 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms