RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 BAG3O95817 575 aa19.56■□□□□ 0.72
SHKBP1-205ENST00000594973 MMP1P03956 469 aa19.56■□□□□ 0.72
SHKBP1-205ENST00000594973 SAFBQ15424 915 aaKnown RBP eCLIP19.56■□□□□ 0.72
SHKBP1-205ENST00000594973 SBK1Q52WX2 424 aa19.56■□□□□ 0.72
SHKBP1-205ENST00000594973 TMED8Q6PL24 325 aaPredicted RBP19.56■□□□□ 0.72
SHKBP1-205ENST00000594973 DIS3L2Q8IYB7 885 aaKnown RBP19.56■□□□□ 0.72
SHKBP1-205ENST00000594973 FMR1NBQ8N0W7 255 aaPredicted RBP19.56■□□□□ 0.72
SHKBP1-205ENST00000594973 TGFBRAP1Q8WUH2 860 aa19.56■□□□□ 0.72
SHKBP1-205ENST00000594973 CRAMP1Q96RY5 1269 aa19.56■□□□□ 0.72
SHKBP1-205ENST00000594973 ZNF215Q9UL58 517 aaPredicted RBP19.56■□□□□ 0.72
SHKBP1-205ENST00000594973 A0A1W2PQ27 194 aa19.56■□□□□ 0.72
SHKBP1-205ENST00000594973 A0A1W2PQ64 194 aa19.56■□□□□ 0.72
SHKBP1-205ENST00000594973 A0A1W2PQD8 194 aa19.56■□□□□ 0.72
SHKBP1-205ENST00000594973 PLEKHA8P1O95397 391 aa19.56■□□□□ 0.72
SHKBP1-205ENST00000594973 IRX3P78415 501 aaPredicted RBP19.56■□□□□ 0.72
SHKBP1-205ENST00000594973 SLC39A14Q15043 492 aa19.56■□□□□ 0.72
SHKBP1-205ENST00000594973 DYNLL2Q96FJ2 89 aa19.56■□□□□ 0.72
SHKBP1-205ENST00000594973 FEZ2Q9UHY8 353 aaPredicted RBP19.56■□□□□ 0.72
SHKBP1-205ENST00000594973 ECM29Q5VYK3 1845 aa19.55■□□□□ 0.72
SHKBP1-205ENST00000594973 A0A087WWV3 80 aa19.55■□□□□ 0.72
SHKBP1-205ENST00000594973 PPEF1O14829 653 aaPredicted RBP19.55■□□□□ 0.72
SHKBP1-205ENST00000594973 WDHD1O75717 1129 aaPredicted RBP19.55■□□□□ 0.72
SHKBP1-205ENST00000594973 AKAP17AQ02040 695 aaKnown RBP19.55■□□□□ 0.72
SHKBP1-205ENST00000594973 TROAPQ12815 778 aa19.55■□□□□ 0.72
SHKBP1-205ENST00000594973 MFSD14BQ5SR56 506 aa19.55■□□□□ 0.72
SHKBP1-205ENST00000594973 OLFM4Q6UX06 510 aa19.55■□□□□ 0.72
SHKBP1-205ENST00000594973 NOSTRINQ8IVI9 506 aa19.55■□□□□ 0.72
SHKBP1-205ENST00000594973 EFCC1Q9HA90 598 aa19.55■□□□□ 0.72
SHKBP1-205ENST00000594973 CBX8Q9HC52 389 aa19.55■□□□□ 0.72
SHKBP1-205ENST00000594973 MAST2Q6P0Q8 1798 aa19.55■□□□□ 0.72
SHKBP1-205ENST00000594973 RIMBP2O15034 1052 aa19.54■□□□□ 0.72
SHKBP1-205ENST00000594973 CTAGE5O15320 804 aa19.54■□□□□ 0.72
SHKBP1-205ENST00000594973 IL1R1P14778 569 aa19.54■□□□□ 0.72
SHKBP1-205ENST00000594973 NYAP1Q6ZVC0 841 aa19.54■□□□□ 0.72
SHKBP1-205ENST00000594973 MAPKAPK5Q8IW41 473 aa19.54■□□□□ 0.72
SHKBP1-205ENST00000594973 SDF4Q9BRK5 362 aa19.54■□□□□ 0.72
SHKBP1-205ENST00000594973 TRIM34Q9BYJ4 488 aa19.54■□□□□ 0.72
SHKBP1-205ENST00000594973 MKRN1Q9UHC7 482 aaKnown RBP19.54■□□□□ 0.72
SHKBP1-205ENST00000594973 MROH7-TTC4A0A0A0MT08 1334 aa19.54■□□□□ 0.72
SHKBP1-205ENST00000594973 KLRG2A4D1S0 409 aaPredicted RBP19.54■□□□□ 0.72
SHKBP1-205ENST00000594973 HNRNPH2P55795 449 aaKnown RBP19.54■□□□□ 0.72
SHKBP1-205ENST00000594973 AXDND1Q5T1B0 1012 aaPredicted RBP19.54■□□□□ 0.72
SHKBP1-205ENST00000594973 C12orf60Q5U649 245 aa19.54■□□□□ 0.72
SHKBP1-205ENST00000594973 NLGN1Q8N2Q7 840 aa19.54■□□□□ 0.72
SHKBP1-205ENST00000594973 SAP30BPQ9UHR5 308 aaKnown RBP19.54■□□□□ 0.72
SHKBP1-205ENST00000594973 LDHCP07864 332 aa19.53■□□□□ 0.72
SHKBP1-205ENST00000594973 BTDP43251 543 aa19.53■□□□□ 0.72
SHKBP1-205ENST00000594973 ZNF165P49910 485 aa19.53■□□□□ 0.72
SHKBP1-205ENST00000594973 NR5A1Q13285 461 aa19.53■□□□□ 0.72
SHKBP1-205ENST00000594973 ZNF772Q68DY9 489 aaPredicted RBP19.53■□□□□ 0.72
SHKBP1-205ENST00000594973 AKT1S1Q96B36 256 aa19.53■□□□□ 0.72
SHKBP1-205ENST00000594973 MAP3K14Q99558 947 aa19.53■□□□□ 0.72
SHKBP1-205ENST00000594973 RTFDC1Q9BY42 306 aaPredicted RBP19.53■□□□□ 0.72
SHKBP1-205ENST00000594973 TRIM5Q9C035 493 aa19.53■□□□□ 0.72
SHKBP1-205ENST00000594973 V9GY48 417 aaPredicted RBP19.53■□□□□ 0.72
SHKBP1-205ENST00000594973 KIF2AO00139 706 aaPredicted RBP19.53■□□□□ 0.72
SHKBP1-205ENST00000594973 SLU7O95391 586 aaKnown RBP19.53■□□□□ 0.72
SHKBP1-205ENST00000594973 PPP2R5BQ15173 497 aa19.53■□□□□ 0.72
SHKBP1-205ENST00000594973 PTPN14Q15678 1187 aa19.53■□□□□ 0.72
SHKBP1-205ENST00000594973 MSL1Q68DK7 614 aa19.53■□□□□ 0.72
SHKBP1-205ENST00000594973 OXER1Q8TDS5 423 aa19.53■□□□□ 0.72
SHKBP1-205ENST00000594973 CACTINQ8WUQ7 758 aaKnown RBP19.53■□□□□ 0.72
SHKBP1-205ENST00000594973 FBXW7Q969H0 707 aa19.53■□□□□ 0.72
SHKBP1-205ENST00000594973 RNF26Q9BY78 433 aaPredicted RBP19.53■□□□□ 0.72
SHKBP1-205ENST00000594973 KCND1Q9NSA2 647 aa19.53■□□□□ 0.72
SHKBP1-205ENST00000594973 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.53■□□□□ 0.72
SHKBP1-205ENST00000594973 VPS54Q9P1Q0 977 aa19.53■□□□□ 0.72
SHKBP1-205ENST00000594973 NRBP1Q9UHY1 535 aa19.53■□□□□ 0.72
SHKBP1-205ENST00000594973 PLSCR1O15162 318 aa19.52■□□□□ 0.72
SHKBP1-205ENST00000594973 TFAP4Q01664 338 aa19.52■□□□□ 0.72
SHKBP1-205ENST00000594973 MMP10P09238 476 aa19.52■□□□□ 0.71
SHKBP1-205ENST00000594973 CALM1P0DP23 149 aa19.52■□□□□ 0.71
SHKBP1-205ENST00000594973 CALM2P0DP24 149 aa19.52■□□□□ 0.71
SHKBP1-205ENST00000594973 CALM3P0DP25 149 aa19.52■□□□□ 0.71
SHKBP1-205ENST00000594973 PPP4CP60510 307 aa19.52■□□□□ 0.71
SHKBP1-205ENST00000594973 FUT2Q10981 343 aa19.52■□□□□ 0.71
SHKBP1-205ENST00000594973 PTPAQ15257 358 aa19.52■□□□□ 0.71
SHKBP1-205ENST00000594973 MKNK2Q9HBH9 465 aa19.52■□□□□ 0.71
SHKBP1-205ENST00000594973 RBM28Q9NW13 759 aaKnown RBP19.52■□□□□ 0.71
SHKBP1-205ENST00000594973 DDAH1O94760 285 aa19.51■□□□□ 0.71
SHKBP1-205ENST00000594973 CAVIN2O95810 425 aa19.51■□□□□ 0.71
SHKBP1-205ENST00000594973 H2AFXP16104 143 aaPredicted RBP19.51■□□□□ 0.71
SHKBP1-205ENST00000594973 PFKFB1P16118 471 aa19.51■□□□□ 0.71
SHKBP1-205ENST00000594973 PLCD1P51178 756 aa19.51■□□□□ 0.71
SHKBP1-205ENST00000594973 GTF2IP78347 998 aa19.51■□□□□ 0.71
SHKBP1-205ENST00000594973 PKN1Q16512 942 aa19.51■□□□□ 0.71
SHKBP1-205ENST00000594973 MUM1L1Q5H9M0 696 aa19.51■□□□□ 0.71
SHKBP1-205ENST00000594973 SP8Q8IXZ3 490 aa19.51■□□□□ 0.71
SHKBP1-205ENST00000594973 AMOTL1Q8IY63 956 aa19.51■□□□□ 0.71
SHKBP1-205ENST00000594973 SLC44A5Q8NCS7 719 aa19.51■□□□□ 0.71
SHKBP1-205ENST00000594973 ZNF592Q92610 1267 aa19.51■□□□□ 0.71
SHKBP1-205ENST00000594973 CLIC6Q96NY7 704 aa19.51■□□□□ 0.71
SHKBP1-205ENST00000594973 SRGNP10124 158 aa19.51■□□□□ 0.71
SHKBP1-205ENST00000594973 ATP2B1P20020 1258 aa19.51■□□□□ 0.71
SHKBP1-205ENST00000594973 CMA1P23946 247 aa19.51■□□□□ 0.71
SHKBP1-205ENST00000594973 ELF2Q15723 593 aa19.51■□□□□ 0.71
SHKBP1-205ENST00000594973 C11orf57Q6ZUT1 292 aaPredicted RBP19.51■□□□□ 0.71
SHKBP1-205ENST00000594973 JMYQ8N9B5 988 aa19.51■□□□□ 0.71
SHKBP1-205ENST00000594973 CTCFLQ8NI51 663 aaPredicted RBP19.51■□□□□ 0.71
SHKBP1-205ENST00000594973 SHISA4Q96DD7 197 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms