RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 STX17P56962 302 aa18.79■□□□□ 0.6
LIG1-206ENST00000594067 PKN1Q16512 942 aa18.79■□□□□ 0.6
LIG1-206ENST00000594067 KLHL10Q6JEL2 608 aa18.79■□□□□ 0.6
LIG1-206ENST00000594067 ATP8B1O43520 1251 aa18.79■□□□□ 0.6
LIG1-206ENST00000594067 PLEKHA8P1O95397 391 aa18.79■□□□□ 0.6
LIG1-206ENST00000594067 RCAN1P53805 252 aa18.79■□□□□ 0.6
LIG1-206ENST00000594067 MAP3K9P80192 1104 aa18.79■□□□□ 0.6
LIG1-206ENST00000594067 ENAHQ8N8S7 591 aaPredicted RBP18.79■□□□□ 0.6
LIG1-206ENST00000594067 SPATA20Q8TB22 786 aa18.79■□□□□ 0.6
LIG1-206ENST00000594067 NIP7Q9Y221 180 aaKnown RBP eCLIP18.79■□□□□ 0.6
LIG1-206ENST00000594067 WNT7AO00755 349 aa18.78■□□□□ 0.6
LIG1-206ENST00000594067 SASH3O75995 380 aa18.78■□□□□ 0.6
LIG1-206ENST00000594067 CASQ1P31415 396 aa18.78■□□□□ 0.6
LIG1-206ENST00000594067 GYG1P46976 350 aa18.78■□□□□ 0.6
LIG1-206ENST00000594067 IRX5P78411 483 aaPredicted RBP18.78■□□□□ 0.6
LIG1-206ENST00000594067 NR1I3Q14994 352 aa18.78■□□□□ 0.6
LIG1-206ENST00000594067 CCDC87Q9NVE4 849 aa18.78■□□□□ 0.6
LIG1-206ENST00000594067 V9GY48 417 aaPredicted RBP18.78■□□□□ 0.6
LIG1-206ENST00000594067 TEX33O43247 280 aa18.78■□□□□ 0.6
LIG1-206ENST00000594067 TBC1D8O95759 1140 aa18.78■□□□□ 0.6
LIG1-206ENST00000594067 KRT2P35908 639 aa18.78■□□□□ 0.6
LIG1-206ENST00000594067 CRKLP46109 303 aaKnown RBP18.78■□□□□ 0.6
LIG1-206ENST00000594067 DYNLL1P63167 89 aaKnown RBP18.78■□□□□ 0.6
LIG1-206ENST00000594067 AATFQ9NY61 560 aaKnown RBP eCLIP18.78■□□□□ 0.6
LIG1-206ENST00000594067 RTL9Q8NET4 1388 aa18.78■□□□□ 0.6
LIG1-206ENST00000594067 POLR3GO15318 223 aaPredicted RBP18.77■□□□□ 0.6
LIG1-206ENST00000594067 CAMTA2O94983 1202 aa18.77■□□□□ 0.6
LIG1-206ENST00000594067 CD44P16070 742 aaKnown RBP18.77■□□□□ 0.6
LIG1-206ENST00000594067 XBP1P17861 261 aa18.77■□□□□ 0.6
LIG1-206ENST00000594067 HNRNPH2P55795 449 aaKnown RBP18.77■□□□□ 0.6
LIG1-206ENST00000594067 MTF1Q14872 753 aa18.77■□□□□ 0.6
LIG1-206ENST00000594067 NOM1Q5C9Z4 860 aaKnown RBP18.77■□□□□ 0.6
LIG1-206ENST00000594067 SYMPKQ92797 1274 aaKnown RBP18.77■□□□□ 0.6
LIG1-206ENST00000594067 ZSCAN10Q96SZ4 725 aaPredicted RBP18.77■□□□□ 0.6
LIG1-206ENST00000594067 NTSR2O95665 410 aa18.77■□□□□ 0.6
LIG1-206ENST00000594067 ATP6V1AP38606 617 aa18.77■□□□□ 0.6
LIG1-206ENST00000594067 KARSQ15046 597 aaKnown RBP18.77■□□□□ 0.6
LIG1-206ENST00000594067 SMYD4Q8IYR2 804 aaPredicted RBP18.77■□□□□ 0.6
LIG1-206ENST00000594067 PHF20Q9BVI0 1012 aa18.77■□□□□ 0.6
LIG1-206ENST00000594067 A0A1B0GTH6 734 aa18.77■□□□□ 0.59
LIG1-206ENST00000594067 ERCC5P28715 1186 aaPredicted RBP18.77■□□□□ 0.59
LIG1-206ENST00000594067 ZNF174Q15697 407 aa18.77■□□□□ 0.59
LIG1-206ENST00000594067 IFIT1BQ5T764 474 aaKnown RBP18.77■□□□□ 0.59
LIG1-206ENST00000594067 CC2D1AQ6P1N0 951 aaPredicted RBP18.77■□□□□ 0.59
LIG1-206ENST00000594067 PAGE5Q96GU1 130 aa18.77■□□□□ 0.59
LIG1-206ENST00000594067 ANAPC4Q9UJX5 808 aa18.77■□□□□ 0.59
LIG1-206ENST00000594067 BCORQ6W2J9 1755 aa18.76■□□□□ 0.59
LIG1-206ENST00000594067 GOLGA6L9A6NEM1 432 aa18.76■□□□□ 0.59
LIG1-206ENST00000594067 FUT2Q10981 343 aa18.76■□□□□ 0.59
LIG1-206ENST00000594067 PARP10Q53GL7 1025 aa18.76■□□□□ 0.59
LIG1-206ENST00000594067 GPR161Q8N6U8 529 aaKnown RBP18.76■□□□□ 0.59
LIG1-206ENST00000594067 CPLX3Q8WVH0 158 aa18.76■□□□□ 0.59
LIG1-206ENST00000594067 ACSBG1Q96GR2 724 aa18.76■□□□□ 0.59
LIG1-206ENST00000594067 TULP2O00295 520 aa18.76■□□□□ 0.59
LIG1-206ENST00000594067 TEX35Q5T0J7 233 aa18.76■□□□□ 0.59
LIG1-206ENST00000594067 RSRC2Q7L4I2 434 aaKnown RBP18.76■□□□□ 0.59
LIG1-206ENST00000594067 CATIPQ7Z7H3 387 aa18.76■□□□□ 0.59
LIG1-206ENST00000594067 RIOK1Q9BRS2 568 aaKnown RBP18.76■□□□□ 0.59
LIG1-206ENST00000594067 MRFAP1Q9Y605 127 aa18.76■□□□□ 0.59
LIG1-206ENST00000594067 SOWAHDA6NJG2 315 aa18.75■□□□□ 0.59
LIG1-206ENST00000594067 AKR1B15C9JRZ8 316 aaPredicted RBP18.75■□□□□ 0.59
LIG1-206ENST00000594067 PRPF3O43395 683 aaKnown RBP18.75■□□□□ 0.59
LIG1-206ENST00000594067 APTXQ7Z2E3 356 aaKnown RBP18.75■□□□□ 0.59
LIG1-206ENST00000594067 STAMQ92783 540 aa18.75■□□□□ 0.59
LIG1-206ENST00000594067 ZCCHC17Q9NP64 241 aaKnown RBP18.75■□□□□ 0.59
LIG1-206ENST00000594067 NHSL1Q5SYE7 1610 aa18.75■□□□□ 0.59
LIG1-206ENST00000594067 SPATA1Q5VX52 437 aa18.75■□□□□ 0.59
LIG1-206ENST00000594067 SYNRGQ9UMZ2 1314 aa18.75■□□□□ 0.59
LIG1-206ENST00000594067 COBLO75128 1261 aa18.74■□□□□ 0.59
LIG1-206ENST00000594067 PPP2R5BQ15173 497 aa18.74■□□□□ 0.59
LIG1-206ENST00000594067 SH3RF1Q7Z6J0 888 aa18.74■□□□□ 0.59
LIG1-206ENST00000594067 KIFC2Q96AC6 838 aa18.74■□□□□ 0.59
LIG1-206ENST00000594067 CCDC34Q96HJ3 373 aa18.74■□□□□ 0.59
LIG1-206ENST00000594067 MRPL44Q9H9J2 332 aaKnown RBP18.74■□□□□ 0.59
LIG1-206ENST00000594067 EVX2Q03828 476 aa18.74■□□□□ 0.59
LIG1-206ENST00000594067 PPP2R3AQ06190 1150 aa18.74■□□□□ 0.59
LIG1-206ENST00000594067 RBL2Q08999 1139 aa18.74■□□□□ 0.59
LIG1-206ENST00000594067 CUL4BQ13620 913 aa18.74■□□□□ 0.59
LIG1-206ENST00000594067 IRX2Q9BZI1 471 aaPredicted RBP18.74■□□□□ 0.59
LIG1-206ENST00000594067 COL4A1P02462 1669 aa18.73■□□□□ 0.59
LIG1-206ENST00000594067 GTF2E1P29083 439 aaPredicted RBP18.73■□□□□ 0.59
LIG1-206ENST00000594067 IGSF22Q8N9C0 903 aa18.73■□□□□ 0.59
LIG1-206ENST00000594067 ST5P78524 1137 aa18.73■□□□□ 0.59
LIG1-206ENST00000594067 TROAPQ12815 778 aa18.73■□□□□ 0.59
LIG1-206ENST00000594067 DPYDQ12882 1025 aa18.73■□□□□ 0.59
LIG1-206ENST00000594067 ITPK1Q13572 414 aa18.73■□□□□ 0.59
LIG1-206ENST00000594067 BBXQ8WY36 941 aaPredicted RBP18.73■□□□□ 0.59
LIG1-206ENST00000594067 PARD6BQ9BYG5 372 aa18.73■□□□□ 0.59
LIG1-206ENST00000594067 GNL3LQ9NVN8 582 aaKnown RBP18.73■□□□□ 0.59
LIG1-206ENST00000594067 COL1A1P02452 1464 aaPredicted RBP18.73■□□□□ 0.59
LIG1-206ENST00000594067 OAS2P29728 719 aaKnown RBP18.72■□□□□ 0.59
LIG1-206ENST00000594067 TTC38Q5R3I4 469 aa18.72■□□□□ 0.59
LIG1-206ENST00000594067 PPFIBP1Q86W92 1011 aa18.72■□□□□ 0.59
LIG1-206ENST00000594067 IQCA1Q86XH1 822 aa18.72■□□□□ 0.59
LIG1-206ENST00000594067 FERMT2Q96AC1 680 aa18.72■□□□□ 0.59
LIG1-206ENST00000594067 CDC5LQ99459 802 aaKnown RBP18.72■□□□□ 0.59
LIG1-206ENST00000594067 BRMS1Q9HCU9 246 aa18.72■□□□□ 0.59
LIG1-206ENST00000594067 ZNF804BA4D1E1 1349 aa18.72■□□□□ 0.59
LIG1-206ENST00000594067 A0A0U1RQJ8 604 aa18.72■□□□□ 0.59
LIG1-206ENST00000594067 PPP1R3GB7ZBB8 358 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms