RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 ZNF236Q9UL36 1845 aa17.93■□□□□ 0.46
PNKP-202ENST00000593706 RLFQ13129 1914 aa17.92■□□□□ 0.46
PNKP-202ENST00000593706 WDR78Q5VTH9 848 aa17.92■□□□□ 0.46
PNKP-202ENST00000593706 PLEKHH3Q7Z736 793 aa17.92■□□□□ 0.46
PNKP-202ENST00000593706 AACSQ86V21 672 aa17.92■□□□□ 0.46
PNKP-202ENST00000593706 ERC1Q8IUD2 1116 aa17.92■□□□□ 0.46
PNKP-202ENST00000593706 APBA2Q99767 749 aa17.92■□□□□ 0.46
PNKP-202ENST00000593706 EHD4Q9H223 541 aa17.92■□□□□ 0.46
PNKP-202ENST00000593706 OGDHLQ9ULD0 1010 aa17.92■□□□□ 0.46
PNKP-202ENST00000593706 PLXNA1Q9UIW2 1896 aa17.92■□□□□ 0.46
PNKP-202ENST00000593706 USP17L15C9J2P7 530 aa17.91■□□□□ 0.46
PNKP-202ENST00000593706 USP17L13C9JLJ4 530 aa17.91■□□□□ 0.46
PNKP-202ENST00000593706 USP17L11C9JVI0 530 aa17.91■□□□□ 0.46
PNKP-202ENST00000593706 USP17L18D6R9N7 530 aa17.91■□□□□ 0.46
PNKP-202ENST00000593706 USP17L22D6RA61 530 aa17.91■□□□□ 0.46
PNKP-202ENST00000593706 USP17L17D6RBQ6 530 aa17.91■□□□□ 0.46
PNKP-202ENST00000593706 USP17L19D6RCP7 530 aa17.91■□□□□ 0.46
PNKP-202ENST00000593706 USP17L20D6RJB6 530 aa17.91■□□□□ 0.46
PNKP-202ENST00000593706 SOX1O00570 391 aaPredicted RBP17.91■□□□□ 0.46
PNKP-202ENST00000593706 USP14P54578 494 aa17.91■□□□□ 0.46
PNKP-202ENST00000593706 CCNA1P78396 465 aa17.91■□□□□ 0.46
PNKP-202ENST00000593706 CACNB2Q08289 660 aaPredicted RBP17.91■□□□□ 0.46
PNKP-202ENST00000593706 USP17L24Q0WX57 530 aa17.91■□□□□ 0.46
PNKP-202ENST00000593706 CCL14Q16627 93 aa17.91■□□□□ 0.46
PNKP-202ENST00000593706 ABCB5Q2M3G0 1257 aa17.91■□□□□ 0.46
PNKP-202ENST00000593706 CERKLQ49MI3 558 aaPredicted RBP17.91■□□□□ 0.46
PNKP-202ENST00000593706 TTC6Q86TZ1 520 aa17.91■□□□□ 0.46
PNKP-202ENST00000593706 LRCH3Q96II8 777 aa17.91■□□□□ 0.46
PNKP-202ENST00000593706 RCAN3Q9UKA8 241 aa17.91■□□□□ 0.46
PNKP-202ENST00000593706 EXOC6BQ9Y2D4 811 aa17.91■□□□□ 0.46
PNKP-202ENST00000593706 UNC80Q8N2C7 3258 aa17.9■□□□□ 0.46
PNKP-202ENST00000593706 GLRX3O76003 335 aaKnown RBP17.9■□□□□ 0.46
PNKP-202ENST00000593706 SYN1P17600 705 aa17.9■□□□□ 0.46
PNKP-202ENST00000593706 MNX1P50219 401 aaPredicted RBP17.9■□□□□ 0.46
PNKP-202ENST00000593706 Q3C1V9 767 aa17.9■□□□□ 0.46
PNKP-202ENST00000593706 TATDN1Q6P1N9 297 aa17.9■□□□□ 0.46
PNKP-202ENST00000593706 CEP85Q6P2H3 762 aa17.9■□□□□ 0.46
PNKP-202ENST00000593706 TMED8Q6PL24 325 aaPredicted RBP17.9■□□□□ 0.46
PNKP-202ENST00000593706 C12orf42Q96LP6 360 aa17.9■□□□□ 0.46
PNKP-202ENST00000593706 ANTXR1Q9H6X2 564 aa17.9■□□□□ 0.46
PNKP-202ENST00000593706 CABP5Q9NP86 173 aa17.9■□□□□ 0.46
PNKP-202ENST00000593706 RABGAP1Q9Y3P9 1069 aa17.9■□□□□ 0.46
PNKP-202ENST00000593706 CUL9Q8IWT3 2517 aa17.89■□□□□ 0.45
PNKP-202ENST00000593706 VCAM1P19320 739 aa17.89■□□□□ 0.45
PNKP-202ENST00000593706 CCND3P30281 292 aaPredicted RBP17.89■□□□□ 0.45
PNKP-202ENST00000593706 MORN1Q5T089 497 aa17.89■□□□□ 0.45
PNKP-202ENST00000593706 USP6NLQ92738 828 aa17.89■□□□□ 0.45
PNKP-202ENST00000593706 GDF15Q99988 308 aa17.89■□□□□ 0.45
PNKP-202ENST00000593706 IVNS1ABPQ9Y6Y0 642 aa17.89■□□□□ 0.45
PNKP-202ENST00000593706 PFASO15067 1338 aa17.89■□□□□ 0.45
PNKP-202ENST00000593706 LTBP2Q14767 1821 aa17.88■□□□□ 0.45
PNKP-202ENST00000593706 MAGEB6P1A0A0J9YX57 407 aa17.88■□□□□ 0.45
PNKP-202ENST00000593706 POLR3DP05423 398 aaPredicted RBP17.88■□□□□ 0.45
PNKP-202ENST00000593706 MAP2K5Q13163 448 aa17.88■□□□□ 0.45
PNKP-202ENST00000593706 KIAA1683Q9H0B3 1180 aa17.88■□□□□ 0.45
PNKP-202ENST00000593706 BMP8BP34820 402 aa17.87■□□□□ 0.45
PNKP-202ENST00000593706 SHMT1P34896 483 aa17.87■□□□□ 0.45
PNKP-202ENST00000593706 MAGEA10P43363 369 aaPredicted RBP17.87■□□□□ 0.45
PNKP-202ENST00000593706 TTF1Q15361 905 aaPredicted RBP17.87■□□□□ 0.45
PNKP-202ENST00000593706 HSP90AB4PQ58FF6 505 aa17.87■□□□□ 0.45
PNKP-202ENST00000593706 CATSPERGQ6ZRH7 1159 aa17.87■□□□□ 0.45
PNKP-202ENST00000593706 CRNKL1Q9BZJ0 848 aaKnown RBP17.87■□□□□ 0.45
PNKP-202ENST00000593706 IL1RAPL2Q9NP60 686 aa17.87■□□□□ 0.45
PNKP-202ENST00000593706 MPHOSPH10O00566 681 aaKnown RBP17.86■□□□□ 0.45
PNKP-202ENST00000593706 CNMDO75829 334 aa17.86■□□□□ 0.45
PNKP-202ENST00000593706 MS4A1P11836 297 aa17.86■□□□□ 0.45
PNKP-202ENST00000593706 PLCD1P51178 756 aa17.86■□□□□ 0.45
PNKP-202ENST00000593706 MFSD14CQ5VZR4 134 aa17.86■□□□□ 0.45
PNKP-202ENST00000593706 POTEEQ6S8J3 1075 aa17.86■□□□□ 0.45
PNKP-202ENST00000593706 ACER1Q8TDN7 264 aa17.86■□□□□ 0.45
PNKP-202ENST00000593706 EDC3Q96F86 508 aaKnown RBP17.86■□□□□ 0.45
PNKP-202ENST00000593706 BCL11AQ9H165 835 aa17.86■□□□□ 0.45
PNKP-202ENST00000593706 RPAP3Q9H6T3 665 aaPredicted RBP17.86■□□□□ 0.45
PNKP-202ENST00000593706 ZBTB40Q9NUA8 1239 aa17.86■□□□□ 0.45
PNKP-202ENST00000593706 SLC15A5A6NIM6 579 aa17.85■□□□□ 0.45
PNKP-202ENST00000593706 APBB1O00213 710 aa17.85■□□□□ 0.45
PNKP-202ENST00000593706 SLC9C2Q5TAH2 1124 aa17.85■□□□□ 0.45
PNKP-202ENST00000593706 TDHQ8IZJ6 230 aa17.85■□□□□ 0.45
PNKP-202ENST00000593706 DNAJC2Q99543 621 aaKnown RBP17.85■□□□□ 0.45
PNKP-202ENST00000593706 RIOK1Q9BRS2 568 aaKnown RBP17.85■□□□□ 0.45
PNKP-202ENST00000593706 UBE2OQ9C0C9 1292 aaKnown RBP17.85■□□□□ 0.45
PNKP-202ENST00000593706 MCM9Q9NXL9 1143 aa17.85■□□□□ 0.45
PNKP-202ENST00000593706 MYH4Q9Y623 1939 aa17.84■□□□□ 0.45
PNKP-202ENST00000593706 SPDYE16A6NNV3 312 aaPredicted RBP17.84■□□□□ 0.45
PNKP-202ENST00000593706 COL6A1P12109 1028 aa17.84■□□□□ 0.45
PNKP-202ENST00000593706 PDE6AP16499 860 aa17.84■□□□□ 0.45
PNKP-202ENST00000593706 PTPREP23469 700 aa17.84■□□□□ 0.45
PNKP-202ENST00000593706 CNGA1P29973 690 aa17.84■□□□□ 0.45
PNKP-202ENST00000593706 SEPT2Q15019 361 aa17.84■□□□□ 0.45
PNKP-202ENST00000593706 C20orf194Q5TEA3 1177 aa17.84■□□□□ 0.45
PNKP-202ENST00000593706 LHX8Q68G74 356 aa17.84■□□□□ 0.45
PNKP-202ENST00000593706 LBX2Q6XYB7 198 aa17.84■□□□□ 0.45
PNKP-202ENST00000593706 RHPN1Q8TCX5 695 aa17.84■□□□□ 0.45
PNKP-202ENST00000593706 TANGO6Q9C0B7 1094 aa17.84■□□□□ 0.45
PNKP-202ENST00000593706 BTBD7Q9P203 1132 aa17.84■□□□□ 0.45
PNKP-202ENST00000593706 COG6Q9Y2V7 657 aa17.84■□□□□ 0.45
PNKP-202ENST00000593706 SMCHD1A6NHR9 2005 aa17.84■□□□□ 0.45
PNKP-202ENST00000593706 ZNF532Q9HCE3 1301 aa17.83■□□□□ 0.44
PNKP-202ENST00000593706 GOLIM4O00461 696 aa17.83■□□□□ 0.44
PNKP-202ENST00000593706 ATP2B2Q01814 1243 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms