RNA–Protein interactions for RNA: ENST00000593104.5

PRKCSH-220, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-220ENST00000593104 NPLOC4Q8TAT6 608 aa13.7□□□□□ -0.22
PRKCSH-220ENST00000593104 APBA2Q99767 749 aa13.7□□□□□ -0.22
PRKCSH-220ENST00000593104 BCL11AQ9H165 835 aa13.7□□□□□ -0.22
PRKCSH-220ENST00000593104 BTBD7Q9P203 1132 aa13.7□□□□□ -0.22
PRKCSH-220ENST00000593104 COL6A1P12109 1028 aa13.69□□□□□ -0.22
PRKCSH-220ENST00000593104 XRCC5P13010 732 aaKnown RBP13.69□□□□□ -0.22
PRKCSH-220ENST00000593104 VCAM1P19320 739 aa13.69□□□□□ -0.22
PRKCSH-220ENST00000593104 GUCY1A2P33402 732 aa13.69□□□□□ -0.22
PRKCSH-220ENST00000593104 ANO1Q5XXA6 986 aa13.69□□□□□ -0.22
PRKCSH-220ENST00000593104 ITPRIPQ8IWB1 547 aa13.69□□□□□ -0.22
PRKCSH-220ENST00000593104 TDHQ8IZJ6 230 aa13.69□□□□□ -0.22
PRKCSH-220ENST00000593104 CWC22Q9HCG8 908 aaKnown RBP13.69□□□□□ -0.22
PRKCSH-220ENST00000593104 EXOC6BQ9Y2D4 811 aa13.69□□□□□ -0.22
PRKCSH-220ENST00000593104 NAV1Q8NEY1 1877 aa13.68□□□□□ -0.22
PRKCSH-220ENST00000593104 SMIM22K7EJ46 135 aa13.68□□□□□ -0.22
PRKCSH-220ENST00000593104 SHMT1P34896 483 aa13.68□□□□□ -0.22
PRKCSH-220ENST00000593104 ATN1P54259 1190 aaPredicted RBP13.68□□□□□ -0.22
PRKCSH-220ENST00000593104 MAP2K5Q13163 448 aa13.68□□□□□ -0.22
PRKCSH-220ENST00000593104 SLFNL1Q499Z3 407 aa13.68□□□□□ -0.22
PRKCSH-220ENST00000593104 TATDN1Q6P1N9 297 aa13.68□□□□□ -0.22
PRKCSH-220ENST00000593104 CLEC10AQ8IUN9 316 aa13.68□□□□□ -0.22
PRKCSH-220ENST00000593104 TRPV1Q8NER1 839 aa13.68□□□□□ -0.22
PRKCSH-220ENST00000593104 COL6A3P12111 3177 aa13.68□□□□□ -0.22
PRKCSH-220ENST00000593104 SPDYE16A6NNV3 312 aaPredicted RBP13.67□□□□□ -0.22
PRKCSH-220ENST00000593104 USP17L15C9J2P7 530 aa13.67□□□□□ -0.22
PRKCSH-220ENST00000593104 USP17L13C9JLJ4 530 aa13.67□□□□□ -0.22
PRKCSH-220ENST00000593104 USP17L11C9JVI0 530 aa13.67□□□□□ -0.22
PRKCSH-220ENST00000593104 USP17L18D6R9N7 530 aa13.67□□□□□ -0.22
PRKCSH-220ENST00000593104 USP17L22D6RA61 530 aa13.67□□□□□ -0.22
PRKCSH-220ENST00000593104 USP17L17D6RBQ6 530 aa13.67□□□□□ -0.22
PRKCSH-220ENST00000593104 USP17L19D6RCP7 530 aa13.67□□□□□ -0.22
PRKCSH-220ENST00000593104 USP17L20D6RJB6 530 aa13.67□□□□□ -0.22
PRKCSH-220ENST00000593104 CYP2D6P10635 497 aa13.67□□□□□ -0.22
PRKCSH-220ENST00000593104 CNGA1P29973 690 aa13.67□□□□□ -0.22
PRKCSH-220ENST00000593104 CYP2C19P33261 490 aa13.67□□□□□ -0.22
PRKCSH-220ENST00000593104 USP17L24Q0WX57 530 aa13.67□□□□□ -0.22
PRKCSH-220ENST00000593104 SEPT2Q15019 361 aa13.67□□□□□ -0.22
PRKCSH-220ENST00000593104 ABCB5Q2M3G0 1257 aa13.67□□□□□ -0.22
PRKCSH-220ENST00000593104 CERKLQ49MI3 558 aaPredicted RBP13.67□□□□□ -0.22
PRKCSH-220ENST00000593104 KIAA1755Q5JYT7 1200 aa13.67□□□□□ -0.22
PRKCSH-220ENST00000593104 CATSPERGQ6ZRH7 1159 aa13.67□□□□□ -0.22
PRKCSH-220ENST00000593104 AACSQ86V21 672 aa13.67□□□□□ -0.22
PRKCSH-220ENST00000593104 SLC44A5Q8NCS7 719 aa13.67□□□□□ -0.22
PRKCSH-220ENST00000593104 EDC3Q96F86 508 aaKnown RBP13.67□□□□□ -0.22
PRKCSH-220ENST00000593104 ZNF512BQ96KM6 892 aaPredicted RBP13.67□□□□□ -0.22
PRKCSH-220ENST00000593104 C12orf42Q96LP6 360 aa13.67□□□□□ -0.22
PRKCSH-220ENST00000593104 FAM161BQ96MY7 647 aa13.67□□□□□ -0.22
PRKCSH-220ENST00000593104 SENP6Q9GZR1 1112 aaPredicted RBP13.67□□□□□ -0.22
PRKCSH-220ENST00000593104 RPAP3Q9H6T3 665 aaPredicted RBP13.67□□□□□ -0.22
PRKCSH-220ENST00000593104 IL1RAPL2Q9NP60 686 aa13.67□□□□□ -0.22
PRKCSH-220ENST00000593104 SERPINB13Q9UIV8 391 aa13.67□□□□□ -0.22
PRKCSH-220ENST00000593104 NOP58Q9Y2X3 529 aaKnown RBP13.67□□□□□ -0.22
PRKCSH-220ENST00000593104 A0A1W2PRG0 241 aa13.66□□□□□ -0.22
PRKCSH-220ENST00000593104 APBB1O00213 710 aa13.66□□□□□ -0.22
PRKCSH-220ENST00000593104 PTPREP23469 700 aa13.66□□□□□ -0.22
PRKCSH-220ENST00000593104 LRIT3Q3SXY7 679 aa13.66□□□□□ -0.22
PRKCSH-220ENST00000593104 MTMR10Q9NXD2 777 aa13.66□□□□□ -0.22
PRKCSH-220ENST00000593104 RABGAP1Q9Y3P9 1069 aa13.66□□□□□ -0.22
PRKCSH-220ENST00000593104 CCER2I3L3R5 266 aa13.65□□□□□ -0.22
PRKCSH-220ENST00000593104 CHGBP05060 677 aa13.65□□□□□ -0.22
PRKCSH-220ENST00000593104 CAPN2P17655 700 aa13.65□□□□□ -0.22
PRKCSH-220ENST00000593104 GJC2Q5T442 439 aaPredicted RBP13.65□□□□□ -0.22
PRKCSH-220ENST00000593104 CEP85Q6P2H3 762 aa13.65□□□□□ -0.22
PRKCSH-220ENST00000593104 SAMD1Q6SPF0 538 aaPredicted RBP13.65□□□□□ -0.22
PRKCSH-220ENST00000593104 FTSJ3Q8IY81 847 aaKnown RBP13.65□□□□□ -0.22
PRKCSH-220ENST00000593104 SDR42E1Q8WUS8 393 aa13.65□□□□□ -0.22
PRKCSH-220ENST00000593104 RIOK1Q9BRS2 568 aaKnown RBP13.65□□□□□ -0.22
PRKCSH-220ENST00000593104 GINM1Q9NU53 330 aa13.65□□□□□ -0.22
PRKCSH-220ENST00000593104 RLFQ13129 1914 aa13.64□□□□□ -0.23
PRKCSH-220ENST00000593104 MPHOSPH10O00566 681 aaKnown RBP13.64□□□□□ -0.23
PRKCSH-220ENST00000593104 MYCNP04198 464 aaPredicted RBP13.64□□□□□ -0.23
PRKCSH-220ENST00000593104 POLR3DP05423 398 aaPredicted RBP13.64□□□□□ -0.23
PRKCSH-220ENST00000593104 GRB14Q14449 540 aa13.64□□□□□ -0.23
PRKCSH-220ENST00000593104 PRAMEF19Q5SWL8 479 aa13.64□□□□□ -0.23
PRKCSH-220ENST00000593104 MFSD14CQ5VZR4 134 aa13.64□□□□□ -0.23
PRKCSH-220ENST00000593104 TRMT44Q8IYL2 757 aaKnown RBP13.64□□□□□ -0.23
PRKCSH-220ENST00000593104 PANK1Q8TE04 598 aa13.64□□□□□ -0.23
PRKCSH-220ENST00000593104 GTF3C2Q8WUA4 911 aaPredicted RBP13.64□□□□□ -0.23
PRKCSH-220ENST00000593104 DYNLL2Q96FJ2 89 aa13.64□□□□□ -0.23
PRKCSH-220ENST00000593104 KIAA1683Q9H0B3 1180 aa13.64□□□□□ -0.23
PRKCSH-220ENST00000593104 EHD4Q9H223 541 aa13.64□□□□□ -0.23
PRKCSH-220ENST00000593104 DDX20Q9UHI6 824 aaKnown RBP13.64□□□□□ -0.23
PRKCSH-220ENST00000593104 LTBP2Q14767 1821 aa13.64□□□□□ -0.23
PRKCSH-220ENST00000593104 BAZ2AQ9UIF9 1905 aaKnown RBP13.63□□□□□ -0.23
PRKCSH-220ENST00000593104 MAGEB6P1A0A0J9YX57 407 aa13.63□□□□□ -0.23
PRKCSH-220ENST00000593104 SLC15A5A6NIM6 579 aa13.63□□□□□ -0.23
PRKCSH-220ENST00000593104 CCNA1P78396 465 aa13.63□□□□□ -0.23
PRKCSH-220ENST00000593104 ATP2B2Q01814 1243 aa13.63□□□□□ -0.23
PRKCSH-220ENST00000593104 GABPAQ06546 454 aa13.63□□□□□ -0.23
PRKCSH-220ENST00000593104 MAP3K12Q12852 859 aa13.63□□□□□ -0.23
PRKCSH-220ENST00000593104 TTC6Q86TZ1 520 aa13.63□□□□□ -0.23
PRKCSH-220ENST00000593104 SPICE1Q8N0Z3 855 aa13.63□□□□□ -0.23
PRKCSH-220ENST00000593104 LCORLQ8N3X6 602 aa13.63□□□□□ -0.23
PRKCSH-220ENST00000593104 MOV10L1Q9BXT6 1211 aaKnown RBP13.63□□□□□ -0.23
PRKCSH-220ENST00000593104 CABP5Q9NP86 173 aa13.63□□□□□ -0.23
PRKCSH-220ENST00000593104 MCM9Q9NXL9 1143 aa13.63□□□□□ -0.23
PRKCSH-220ENST00000593104 CYP2D7A0A087X1C5 515 aa13.62□□□□□ -0.23
PRKCSH-220ENST00000593104 PRKAB2O43741 272 aa13.62□□□□□ -0.23
PRKCSH-220ENST00000593104 COBLO75128 1261 aa13.62□□□□□ -0.23
PRKCSH-220ENST00000593104 CYBAP13498 195 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms