RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 FGRP09769 529 aa17.69■□□□□ 0.42
DDX39A-221ENST00000593026 TSPY3P0CV98 308 aa17.69■□□□□ 0.42
DDX39A-221ENST00000593026 TSPY8P0CW00 308 aa17.69■□□□□ 0.42
DDX39A-221ENST00000593026 ICA1Q05084 483 aa17.69■□□□□ 0.42
DDX39A-221ENST00000593026 MTMR2Q13614 643 aa17.69■□□□□ 0.42
DDX39A-221ENST00000593026 FAM47AQ5JRC9 791 aa17.69■□□□□ 0.42
DDX39A-221ENST00000593026 RRP12Q5JTH9 1297 aaKnown RBP17.69■□□□□ 0.42
DDX39A-221ENST00000593026 OTUD7BQ6GQQ9 843 aa17.69■□□□□ 0.42
DDX39A-221ENST00000593026 IFNL1Q8IU54 200 aa17.69■□□□□ 0.42
DDX39A-221ENST00000593026 KANSL2Q9H9L4 492 aa17.69■□□□□ 0.42
DDX39A-221ENST00000593026 RBM8AQ9Y5S9 174 aaKnown RBP17.69■□□□□ 0.42
DDX39A-221ENST00000593026 PLIN4Q96Q06 1357 aa17.68■□□□□ 0.42
DDX39A-221ENST00000593026 C19orf81C9J6K1 198 aa17.68■□□□□ 0.42
DDX39A-221ENST00000593026 RANBP6O60518 1105 aaKnown RBP17.68■□□□□ 0.42
DDX39A-221ENST00000593026 HMGCS2P54868 508 aa17.68■□□□□ 0.42
DDX39A-221ENST00000593026 BACE1P56817 501 aa17.68■□□□□ 0.42
DDX39A-221ENST00000593026 TFAP4Q01664 338 aa17.68■□□□□ 0.42
DDX39A-221ENST00000593026 GADL1Q6ZQY3 521 aa17.68■□□□□ 0.42
DDX39A-221ENST00000593026 FASTKD5Q7L8L6 764 aaKnown RBP17.68■□□□□ 0.42
DDX39A-221ENST00000593026 CLEC10AQ8IUN9 316 aa17.68■□□□□ 0.42
DDX39A-221ENST00000593026 PTPN18Q99952 460 aa17.68■□□□□ 0.42
DDX39A-221ENST00000593026 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.68■□□□□ 0.42
DDX39A-221ENST00000593026 ARHGEF10LQ9HCE6 1279 aa17.68■□□□□ 0.42
DDX39A-221ENST00000593026 LOC285556D6RIA3 1793 aa17.67■□□□□ 0.42
DDX39A-221ENST00000593026 BTBD19C9JJ37 291 aa17.67■□□□□ 0.42
DDX39A-221ENST00000593026 CA12O43570 354 aa17.67■□□□□ 0.42
DDX39A-221ENST00000593026 ALDH1A1P00352 501 aa17.67■□□□□ 0.42
DDX39A-221ENST00000593026 CYP21A2P08686 494 aa17.67■□□□□ 0.42
DDX39A-221ENST00000593026 CTCFP49711 727 aaPredicted RBP17.67■□□□□ 0.42
DDX39A-221ENST00000593026 MOGSQ13724 837 aa17.67■□□□□ 0.42
DDX39A-221ENST00000593026 ZYXQ15942 572 aaKnown RBP17.67■□□□□ 0.42
DDX39A-221ENST00000593026 SH3D19Q5HYK7 790 aa17.67■□□□□ 0.42
DDX39A-221ENST00000593026 NEDD1Q8NHV4 660 aa17.67■□□□□ 0.42
DDX39A-221ENST00000593026 ACER1Q8TDN7 264 aa17.67■□□□□ 0.42
DDX39A-221ENST00000593026 KIAA1683Q9H0B3 1180 aa17.67■□□□□ 0.42
DDX39A-221ENST00000593026 RNF186Q9NXI6 227 aa17.67■□□□□ 0.42
DDX39A-221ENST00000593026 TMOD4Q9NZQ9 345 aa17.67■□□□□ 0.42
DDX39A-221ENST00000593026 NEDD4P46934 1319 aa17.67■□□□□ 0.42
DDX39A-221ENST00000593026 IGKV6D-41A0A0C4DH26 115 aa17.66■□□□□ 0.42
DDX39A-221ENST00000593026 TRPA1O75762 1119 aa17.66■□□□□ 0.42
DDX39A-221ENST00000593026 REC8O95072 547 aa17.66■□□□□ 0.42
DDX39A-221ENST00000593026 ATP2B2Q01814 1243 aa17.66■□□□□ 0.42
DDX39A-221ENST00000593026 ANKRD23Q86SG2 305 aa17.66■□□□□ 0.42
DDX39A-221ENST00000593026 FAM43AQ8N2R8 423 aa17.66■□□□□ 0.42
DDX39A-221ENST00000593026 PROCA1Q8NCQ7 364 aaPredicted RBP17.66■□□□□ 0.42
DDX39A-221ENST00000593026 ESR2Q92731 530 aa17.66■□□□□ 0.42
DDX39A-221ENST00000593026 SH2D4AQ9H788 454 aa17.66■□□□□ 0.42
DDX39A-221ENST00000593026 CNNM2Q9H8M5 875 aa17.66■□□□□ 0.42
DDX39A-221ENST00000593026 SAGE1Q9NXZ1 904 aa17.66■□□□□ 0.42
DDX39A-221ENST00000593026 A0A1W2PRG0 241 aa17.65■□□□□ 0.42
DDX39A-221ENST00000593026 FOXN1O15353 648 aa17.65■□□□□ 0.42
DDX39A-221ENST00000593026 EEF2P13639 858 aaKnown RBP17.65■□□□□ 0.42
DDX39A-221ENST00000593026 NT5C2P49902 561 aa17.65■□□□□ 0.42
DDX39A-221ENST00000593026 USP14P54578 494 aa17.65■□□□□ 0.42
DDX39A-221ENST00000593026 DGKZQ13574 1117 aa17.65■□□□□ 0.42
DDX39A-221ENST00000593026 IFFO2Q5TF58 517 aa17.65■□□□□ 0.42
DDX39A-221ENST00000593026 USP17L2Q6R6M4 530 aa17.65■□□□□ 0.42
DDX39A-221ENST00000593026 SIAH1Q8IUQ4 282 aa17.65■□□□□ 0.42
DDX39A-221ENST00000593026 CEP95Q96GE4 821 aa17.65■□□□□ 0.42
DDX39A-221ENST00000593026 ZCCHC17Q9NP64 241 aaKnown RBP17.65■□□□□ 0.42
DDX39A-221ENST00000593026 PRDM10Q9NQV6 1147 aa17.65■□□□□ 0.42
DDX39A-221ENST00000593026 AGTPBP1Q9UPW5 1226 aa17.65■□□□□ 0.42
DDX39A-221ENST00000593026 PDHXO00330 501 aa17.64■□□□□ 0.41
DDX39A-221ENST00000593026 TRDNQ13061 729 aa17.64■□□□□ 0.41
DDX39A-221ENST00000593026 PPP4R3BQ5MIZ7 849 aa17.64■□□□□ 0.41
DDX39A-221ENST00000593026 COL13A1Q5TAT6 717 aaPredicted RBP17.64■□□□□ 0.41
DDX39A-221ENST00000593026 GPAT2Q6NUI2 795 aa17.64■□□□□ 0.41
DDX39A-221ENST00000593026 KRT23Q9C075 422 aa17.64■□□□□ 0.41
DDX39A-221ENST00000593026 EMILIN3Q9NT22 766 aa17.64■□□□□ 0.41
DDX39A-221ENST00000593026 MTMR4Q9NYA4 1195 aa17.64■□□□□ 0.41
DDX39A-221ENST00000593026 NYAP2Q9P242 653 aa17.64■□□□□ 0.41
DDX39A-221ENST00000593026 TMX2Q9Y320 296 aa17.64■□□□□ 0.41
DDX39A-221ENST00000593026 B4E1Z4 1266 aa17.63■□□□□ 0.41
DDX39A-221ENST00000593026 SLC27A2O14975 620 aa17.63■□□□□ 0.41
DDX39A-221ENST00000593026 KDM4AO75164 1064 aa17.63■□□□□ 0.41
DDX39A-221ENST00000593026 TTLL1O95922 423 aa17.63■□□□□ 0.41
DDX39A-221ENST00000593026 NECTIN1Q15223 517 aa17.63■□□□□ 0.41
DDX39A-221ENST00000593026 TAF1CQ15572 869 aaPredicted RBP17.63■□□□□ 0.41
DDX39A-221ENST00000593026 TREML2Q5T2D2 321 aa17.63■□□□□ 0.41
DDX39A-221ENST00000593026 RNF20Q5VTR2 975 aa17.63■□□□□ 0.41
DDX39A-221ENST00000593026 CREB3L3Q68CJ9 461 aa17.63■□□□□ 0.41
DDX39A-221ENST00000593026 C12orf42Q96LP6 360 aa17.63■□□□□ 0.41
DDX39A-221ENST00000593026 CLIP2Q9UDT6 1046 aa17.63■□□□□ 0.41
DDX39A-221ENST00000593026 PCNTO95613 3336 aa17.63■□□□□ 0.41
DDX39A-221ENST00000593026 E7EWF7 191 aa17.62■□□□□ 0.41
DDX39A-221ENST00000593026 NMT2O60551 498 aa17.62■□□□□ 0.41
DDX39A-221ENST00000593026 PABPC4Q13310 644 aaKnown RBP eCLIP17.62■□□□□ 0.41
DDX39A-221ENST00000593026 RALYLQ86SE5 291 aaKnown RBP17.62■□□□□ 0.41
DDX39A-221ENST00000593026 IL17RBQ9NRM6 502 aa17.62■□□□□ 0.41
DDX39A-221ENST00000593026 TSKSQ9UJT2 592 aa17.62■□□□□ 0.41
DDX39A-221ENST00000593026 STX8Q9UNK0 236 aa17.62■□□□□ 0.41
DDX39A-221ENST00000593026 SLC45A1Q9Y2W3 748 aa17.62■□□□□ 0.41
DDX39A-221ENST00000593026 TAF6LQ9Y6J9 622 aa17.62■□□□□ 0.41
DDX39A-221ENST00000593026 MYH4Q9Y623 1939 aa17.61■□□□□ 0.41
DDX39A-221ENST00000593026 TBC1D8O95759 1140 aa17.61■□□□□ 0.41
DDX39A-221ENST00000593026 VCAM1P19320 739 aa17.61■□□□□ 0.41
DDX39A-221ENST00000593026 CRHR2Q13324 411 aa17.61■□□□□ 0.41
DDX39A-221ENST00000593026 STOX1Q6ZVD7 989 aa17.61■□□□□ 0.41
DDX39A-221ENST00000593026 IQCA1Q86XH1 822 aa17.61■□□□□ 0.41
DDX39A-221ENST00000593026 NCOA7Q8NI08 942 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms