RNA–Protein interactions for RNA: ENST00000590901.5

CXXC1-214, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 2,562 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-214ENST00000590901 DCP1AQ9NPI6 582 aaPredicted RBP17.79■□□□□ 0.44
CXXC1-214ENST00000590901 ZNF219Q9P2Y4 722 aaPredicted RBP17.79■□□□□ 0.44
CXXC1-214ENST00000590901 LEMD3Q9Y2U8 911 aa17.79■□□□□ 0.44
CXXC1-214ENST00000590901 C6orf229H3BNL8 230 aa17.78■□□□□ 0.44
CXXC1-214ENST00000590901 SRGNP10124 158 aa17.78■□□□□ 0.44
CXXC1-214ENST00000590901 GPS2Q13227 327 aa17.78■□□□□ 0.44
CXXC1-214ENST00000590901 ZRSR1Q15695 479 aaKnown RBP17.78■□□□□ 0.44
CXXC1-214ENST00000590901 PLCD3Q8N3E9 789 aa17.78■□□□□ 0.44
CXXC1-214ENST00000590901 KCNQ5Q9NR82 932 aa17.78■□□□□ 0.44
CXXC1-214ENST00000590901 SH3RF3Q8TEJ3 882 aaPredicted RBP17.78■□□□□ 0.44
CXXC1-214ENST00000590901 STAG1Q8WVM7 1258 aa17.78■□□□□ 0.44
CXXC1-214ENST00000590901 SDF4Q9BRK5 362 aa17.78■□□□□ 0.44
CXXC1-214ENST00000590901 EFCAB8A8MWE9 144 aa17.77■□□□□ 0.44
CXXC1-214ENST00000590901 SEC31AO94979 1220 aaKnown RBP17.77■□□□□ 0.44
CXXC1-214ENST00000590901 GUCY1A2P33402 732 aa17.77■□□□□ 0.44
CXXC1-214ENST00000590901 FMR1NBQ8N0W7 255 aaPredicted RBP17.77■□□□□ 0.44
CXXC1-214ENST00000590901 MRPS27Q92552 414 aaKnown RBP17.77■□□□□ 0.44
CXXC1-214ENST00000590901 NACAP1Q9BZK3 213 aa17.77■□□□□ 0.44
CXXC1-214ENST00000590901 ZMYM6O95789 1325 aa17.77■□□□□ 0.43
CXXC1-214ENST00000590901 KIF28PB7ZC32 967 aa17.77■□□□□ 0.43
CXXC1-214ENST00000590901 GNAT2P19087 354 aa17.77■□□□□ 0.43
CXXC1-214ENST00000590901 NTRK3Q16288 839 aa17.77■□□□□ 0.43
CXXC1-214ENST00000590901 FAM47AQ5JRC9 791 aa17.77■□□□□ 0.43
CXXC1-214ENST00000590901 NFXL1Q6ZNB6 911 aa17.77■□□□□ 0.43
CXXC1-214ENST00000590901 KRBA2Q6ZNG9 492 aa17.77■□□□□ 0.43
CXXC1-214ENST00000590901 GGA1Q9UJY5 639 aa17.77■□□□□ 0.43
CXXC1-214ENST00000590901 SEMA3EO15041 775 aa17.76■□□□□ 0.43
CXXC1-214ENST00000590901 OAS2P29728 719 aaKnown RBP17.76■□□□□ 0.43
CXXC1-214ENST00000590901 DPCR1Q3MIW9 517 aa17.76■□□□□ 0.43
CXXC1-214ENST00000590901 DEFB132Q7Z7B7 95 aa17.76■□□□□ 0.43
CXXC1-214ENST00000590901 DZIP1Q86YF9 867 aaKnown RBP17.76■□□□□ 0.43
CXXC1-214ENST00000590901 SMARCE1Q969G3 411 aa17.76■□□□□ 0.43
CXXC1-214ENST00000590901 URI1O94763 535 aaPredicted RBP17.76■□□□□ 0.43
CXXC1-214ENST00000590901 POLR3DP05423 398 aaPredicted RBP17.76■□□□□ 0.43
CXXC1-214ENST00000590901 CHRNA5P30532 468 aa17.76■□□□□ 0.43
CXXC1-214ENST00000590901 NLGN1Q8N2Q7 840 aa17.76■□□□□ 0.43
CXXC1-214ENST00000590901 DYNLL2Q96FJ2 89 aa17.76■□□□□ 0.43
CXXC1-214ENST00000590901 CARD6Q9BX69 1037 aa17.76■□□□□ 0.43
CXXC1-214ENST00000590901 KIAA1468Q9P260 1216 aa17.76■□□□□ 0.43
CXXC1-214ENST00000590901 PPEF1O14829 653 aaPredicted RBP17.75■□□□□ 0.43
CXXC1-214ENST00000590901 METAP2P50579 478 aaKnown RBP eCLIP17.75■□□□□ 0.43
CXXC1-214ENST00000590901 DOK7Q18PE1 504 aa17.75■□□□□ 0.43
CXXC1-214ENST00000590901 TRIM65Q6PJ69 517 aa17.75■□□□□ 0.43
CXXC1-214ENST00000590901 hCG_1642624A0A1W2PR95 340 aa17.75■□□□□ 0.43
CXXC1-214ENST00000590901 BBOX1O75936 387 aa17.75■□□□□ 0.43
CXXC1-214ENST00000590901 TBC1D8O95759 1140 aa17.75■□□□□ 0.43
CXXC1-214ENST00000590901 LDHBP07195 334 aaKnown RBP17.75■□□□□ 0.43
CXXC1-214ENST00000590901 BRIP1Q9BX63 1249 aa17.75■□□□□ 0.43
CXXC1-214ENST00000590901 COL11A2P13942 1736 aaPredicted RBP17.74■□□□□ 0.43
CXXC1-214ENST00000590901 TNS1Q9HBL0 1735 aaKnown RBP17.74■□□□□ 0.43
CXXC1-214ENST00000590901 SLC44A5Q8NCS7 719 aa17.74■□□□□ 0.43
CXXC1-214ENST00000590901 CRAMP1Q96RY5 1269 aa17.74■□□□□ 0.43
CXXC1-214ENST00000590901 TIAM2Q8IVF5 1701 aa17.74■□□□□ 0.43
CXXC1-214ENST00000590901 F8W031 263 aaPredicted RBP17.74■□□□□ 0.43
CXXC1-214ENST00000590901 CPLX1O14810 134 aa17.74■□□□□ 0.43
CXXC1-214ENST00000590901 ZBTB43O43298 467 aa17.74■□□□□ 0.43
CXXC1-214ENST00000590901 SASH3O75995 380 aa17.74■□□□□ 0.43
CXXC1-214ENST00000590901 SLURP2P0DP57 97 aa17.74■□□□□ 0.43
CXXC1-214ENST00000590901 CC2D1AQ6P1N0 951 aaPredicted RBP17.74■□□□□ 0.43
CXXC1-214ENST00000590901 PCDHA7Q9UN72 937 aa17.74■□□□□ 0.43
CXXC1-214ENST00000590901 CCDC88AQ3V6T2 1871 aa17.73■□□□□ 0.43
CXXC1-214ENST00000590901 A0A1W2PQ27 194 aa17.73■□□□□ 0.43
CXXC1-214ENST00000590901 A0A1W2PQ64 194 aa17.73■□□□□ 0.43
CXXC1-214ENST00000590901 A0A1W2PQD8 194 aa17.73■□□□□ 0.43
CXXC1-214ENST00000590901 SMC1AQ14683 1233 aaKnown RBP17.73■□□□□ 0.43
CXXC1-214ENST00000590901 SGMS1Q86VZ5 419 aa17.73■□□□□ 0.43
CXXC1-214ENST00000590901 RASSF4Q9H2L5 321 aa17.73■□□□□ 0.43
CXXC1-214ENST00000590901 MKRN1Q9UHC7 482 aaKnown RBP17.73■□□□□ 0.43
CXXC1-214ENST00000590901 WDR19Q8NEZ3 1342 aa17.73■□□□□ 0.43
CXXC1-214ENST00000590901 GTF2IP78347 998 aa17.73■□□□□ 0.43
CXXC1-214ENST00000590901 SEC23AQ15436 765 aa17.73■□□□□ 0.43
CXXC1-214ENST00000590901 ZSCAN26Q16670 478 aa17.73■□□□□ 0.43
CXXC1-214ENST00000590901 ADALQ6DHV7 355 aa17.73■□□□□ 0.43
CXXC1-214ENST00000590901 ZNF804AQ7Z570 1209 aa17.73■□□□□ 0.43
CXXC1-214ENST00000590901 CERS5Q8N5B7 392 aa17.73■□□□□ 0.43
CXXC1-214ENST00000590901 ENAHQ8N8S7 591 aaPredicted RBP17.73■□□□□ 0.43
CXXC1-214ENST00000590901 TGFBRAP1Q8WUH2 860 aa17.73■□□□□ 0.43
CXXC1-214ENST00000590901 NUP133Q8WUM0 1156 aa17.73■□□□□ 0.43
CXXC1-214ENST00000590901 ZNF622Q969S3 477 aaKnown RBP eCLIP17.73■□□□□ 0.435e-7■■□□□ 12.2
CXXC1-214ENST00000590901 SHISA4Q96DD7 197 aa17.73■□□□□ 0.43
CXXC1-214ENST00000590901 TMEM87BQ96K49 555 aa17.73■□□□□ 0.43
CXXC1-214ENST00000590901 SAP30BPQ9UHR5 308 aaKnown RBP17.73■□□□□ 0.43
CXXC1-214ENST00000590901 PARP3Q9Y6F1 533 aa17.73■□□□□ 0.43
CXXC1-214ENST00000590901 TNKSO95271 1327 aa17.72■□□□□ 0.43
CXXC1-214ENST00000590901 A0A1B0GVL5 298 aa17.72■□□□□ 0.43
CXXC1-214ENST00000590901 GOLGA8AA7E2F4 631 aa17.72■□□□□ 0.43
CXXC1-214ENST00000590901 PLCD1P51178 756 aa17.72■□□□□ 0.43
CXXC1-214ENST00000590901 FANCCQ00597 558 aa17.72■□□□□ 0.43
CXXC1-214ENST00000590901 MFSD14BQ5SR56 506 aa17.72■□□□□ 0.43
CXXC1-214ENST00000590901 CAMKK2Q96RR4 588 aa17.72■□□□□ 0.43
CXXC1-214ENST00000590901 ZCCHC17Q9NP64 241 aaKnown RBP17.72■□□□□ 0.43
CXXC1-214ENST00000590901 MCM9Q9NXL9 1143 aa17.72■□□□□ 0.43
CXXC1-214ENST00000590901 CWC15Q9P013 229 aaKnown RBP17.72■□□□□ 0.43
CXXC1-214ENST00000590901 ANAPC4Q9UJX5 808 aa17.72■□□□□ 0.43
CXXC1-214ENST00000590901 SLC12A7Q9Y666 1083 aa17.72■□□□□ 0.43
CXXC1-214ENST00000590901 DUOX1Q9NRD9 1551 aa17.72■□□□□ 0.43
CXXC1-214ENST00000590901 LTBP1Q14766 1721 aa17.72■□□□□ 0.43
CXXC1-214ENST00000590901 IL1R1P14778 569 aa17.72■□□□□ 0.43
CXXC1-214ENST00000590901 ATP2B4P23634 1241 aa17.72■□□□□ 0.43
CXXC1-214ENST00000590901 NDUFA8P51970 172 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms