RNA–Protein interactions for RNA: ENST00000589937.5

RFX1-207, Transcript of regulatory factor X1, humanhuman

TSL 4

Gene RFX1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-207ENST00000589937 MYH4Q9Y623 1939 aa15.33■□□□□ 0.04
RFX1-207ENST00000589937 TRIOBPQ9H2D6 2365 aa15.32■□□□□ 0.04
RFX1-207ENST00000589937 C19orf81C9J6K1 198 aa15.32■□□□□ 0.04
RFX1-207ENST00000589937 CNMDO75829 334 aa15.32■□□□□ 0.04
RFX1-207ENST00000589937 GJB1P08034 283 aa15.32■□□□□ 0.04
RFX1-207ENST00000589937 VCAM1P19320 739 aa15.32■□□□□ 0.04
RFX1-207ENST00000589937 GJA8P48165 433 aa15.32■□□□□ 0.04
RFX1-207ENST00000589937 UBXN2AP68543 259 aa15.32■□□□□ 0.04
RFX1-207ENST00000589937 IRF5Q13568 498 aa15.32■□□□□ 0.04
RFX1-207ENST00000589937 USP17L2Q6R6M4 530 aa15.32■□□□□ 0.04
RFX1-207ENST00000589937 UBE2Q1Q7Z7E8 422 aa15.32■□□□□ 0.04
RFX1-207ENST00000589937 U2AF1L4Q8WU68 220 aaKnown RBP15.32■□□□□ 0.04
RFX1-207ENST00000589937 GINM1Q9NU53 330 aa15.32■□□□□ 0.04
RFX1-207ENST00000589937 RBPJLQ9UBG7 517 aa15.32■□□□□ 0.04
RFX1-207ENST00000589937 GJD2Q9UKL4 321 aa15.32■□□□□ 0.04
RFX1-207ENST00000589937 PCDHB15Q9Y5E8 787 aa15.32■□□□□ 0.04
RFX1-207ENST00000589937 RANBP2P49792 3224 aaKnown RBP15.32■□□□□ 0.04
RFX1-207ENST00000589937 A0A1W2PRG0 241 aa15.31■□□□□ 0.04
RFX1-207ENST00000589937 MPHOSPH10O00566 681 aaKnown RBP15.31■□□□□ 0.04
RFX1-207ENST00000589937 Q3C1V9 767 aa15.31■□□□□ 0.04
RFX1-207ENST00000589937 KIAA1755Q5JYT7 1200 aa15.31■□□□□ 0.04
RFX1-207ENST00000589937 OTUD7AQ8TE49 926 aaPredicted RBP15.31■□□□□ 0.04
RFX1-207ENST00000589937 TRIB2Q92519 343 aa15.31■□□□□ 0.04
RFX1-207ENST00000589937 C12orf42Q96LP6 360 aa15.31■□□□□ 0.04
RFX1-207ENST00000589937 PUS7LQ9H0K6 701 aaKnown RBP15.31■□□□□ 0.04
RFX1-207ENST00000589937 CHMP4BQ9H444 224 aaKnown RBP15.31■□□□□ 0.04
RFX1-207ENST00000589937 AKR1B1P15121 316 aa15.3■□□□□ 0.04
RFX1-207ENST00000589937 ERVK-9P63128 1117 aa15.3■□□□□ 0.04
RFX1-207ENST00000589937 ERVK-24P63145 666 aa15.3■□□□□ 0.04
RFX1-207ENST00000589937 TMED8Q6PL24 325 aaPredicted RBP15.3■□□□□ 0.04
RFX1-207ENST00000589937 PXYLP1Q8TE99 480 aa15.3■□□□□ 0.04
RFX1-207ENST00000589937 DEFB118Q96PH6 123 aa15.3■□□□□ 0.04
RFX1-207ENST00000589937 KIAA1683Q9H0B3 1180 aa15.3■□□□□ 0.04
RFX1-207ENST00000589937 ZNFX1Q9P2E3 1918 aaKnown RBP15.29■□□□□ 0.04
RFX1-207ENST00000589937 ZNF236Q9UL36 1845 aa15.29■□□□□ 0.04
RFX1-207ENST00000589937 H0YGN5 161 aa15.29■□□□□ 0.04
RFX1-207ENST00000589937 FARP2O94887 1054 aaPredicted RBP15.29■□□□□ 0.04
RFX1-207ENST00000589937 CYP2B6P20813 491 aa15.29■□□□□ 0.04
RFX1-207ENST00000589937 RRP1P56182 461 aaKnown RBP15.29■□□□□ 0.04
RFX1-207ENST00000589937 GPRC5AQ8NFJ5 357 aa15.29■□□□□ 0.04
RFX1-207ENST00000589937 DIS3LQ8TF46 1054 aaKnown RBP15.29■□□□□ 0.04
RFX1-207ENST00000589937 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.29■□□□□ 0.04
RFX1-207ENST00000589937 RPAP3Q9H6T3 665 aaPredicted RBP15.29■□□□□ 0.04
RFX1-207ENST00000589937 DCTPP1Q9H773 170 aa15.29■□□□□ 0.04
RFX1-207ENST00000589937 PAK6Q9NQU5 681 aaPredicted RBP15.29■□□□□ 0.04
RFX1-207ENST00000589937 ECHDC1Q9NTX5 307 aa15.29■□□□□ 0.04
RFX1-207ENST00000589937 HMGCRP04035 888 aa15.28■□□□□ 0.04
RFX1-207ENST00000589937 CCL14Q16627 93 aa15.28■□□□□ 0.04
RFX1-207ENST00000589937 YTHDC1Q96MU7 727 aaKnown RBP15.28■□□□□ 0.04
RFX1-207ENST00000589937 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.28■□□□□ 0.042e-7■■■■□ 23.4
RFX1-207ENST00000589937 CABP5Q9NP86 173 aa15.28■□□□□ 0.04
RFX1-207ENST00000589937 BTBD7Q9P203 1132 aa15.28■□□□□ 0.04
RFX1-207ENST00000589937 PCDH10Q9P2E7 1040 aa15.28■□□□□ 0.04
RFX1-207ENST00000589937 PLXNA1Q9UIW2 1896 aa15.28■□□□□ 0.04
RFX1-207ENST00000589937 SPDYE16A6NNV3 312 aaPredicted RBP15.27■□□□□ 0.04
RFX1-207ENST00000589937 USP17L15C9J2P7 530 aa15.27■□□□□ 0.04
RFX1-207ENST00000589937 USP17L13C9JLJ4 530 aa15.27■□□□□ 0.04
RFX1-207ENST00000589937 USP17L12C9JPN9 530 aa15.27■□□□□ 0.04
RFX1-207ENST00000589937 USP17L11C9JVI0 530 aa15.27■□□□□ 0.04
RFX1-207ENST00000589937 USP17L21D6R901 530 aa15.27■□□□□ 0.04
RFX1-207ENST00000589937 USP17L18D6R9N7 530 aa15.27■□□□□ 0.04
RFX1-207ENST00000589937 USP17L22D6RA61 530 aa15.27■□□□□ 0.04
RFX1-207ENST00000589937 USP17L17D6RBQ6 530 aa15.27■□□□□ 0.04
RFX1-207ENST00000589937 USP17L19D6RCP7 530 aa15.27■□□□□ 0.04
RFX1-207ENST00000589937 USP17L20D6RJB6 530 aa15.27■□□□□ 0.04
RFX1-207ENST00000589937 SGPL1O95470 568 aa15.27■□□□□ 0.04
RFX1-207ENST00000589937 USP17L24Q0WX57 530 aa15.27■□□□□ 0.04
RFX1-207ENST00000589937 UBE3CQ15386 1083 aa15.27■□□□□ 0.04
RFX1-207ENST00000589937 CATSPERGQ6ZRH7 1159 aa15.27■□□□□ 0.04
RFX1-207ENST00000589937 GPR142Q7Z601 462 aa15.27■□□□□ 0.04
RFX1-207ENST00000589937 SIAH1Q8IUQ4 282 aa15.27■□□□□ 0.04
RFX1-207ENST00000589937 STK11IPQ8N1F8 1099 aa15.27■□□□□ 0.04
RFX1-207ENST00000589937 CRBNQ96SW2 442 aa15.27■□□□□ 0.04
RFX1-207ENST00000589937 SLC4A4Q9Y6R1 1079 aa15.27■□□□□ 0.04
RFX1-207ENST00000589937 M0R2C6 588 aa15.26■□□□□ 0.03
RFX1-207ENST00000589937 CDK8P49336 464 aa15.26■□□□□ 0.03
RFX1-207ENST00000589937 USP14P54578 494 aa15.26■□□□□ 0.03
RFX1-207ENST00000589937 HABP4Q5JVS0 413 aaKnown RBP15.26■□□□□ 0.03
RFX1-207ENST00000589937 C12orf60Q5U649 245 aa15.26■□□□□ 0.03
RFX1-207ENST00000589937 SPICE1Q8N0Z3 855 aa15.26■□□□□ 0.03
RFX1-207ENST00000589937 NKX2-3Q8TAU0 364 aa15.26■□□□□ 0.03
RFX1-207ENST00000589937 USP6NLQ92738 828 aa15.26■□□□□ 0.03
RFX1-207ENST00000589937 OSBP2Q969R2 916 aa15.26■□□□□ 0.03
RFX1-207ENST00000589937 EPB41L4AQ9HCS5 686 aaPredicted RBP15.26■□□□□ 0.03
RFX1-207ENST00000589937 ATP8A2Q9NTI2 1148 aa15.26■□□□□ 0.03
RFX1-207ENST00000589937 SZT2Q5T011 3432 aa15.26■□□□□ 0.03
RFX1-207ENST00000589937 DNAH12Q6ZR08 3092 aa15.25■□□□□ 0.03
RFX1-207ENST00000589937 TFRCP02786 760 aaKnown RBP15.25■□□□□ 0.03
RFX1-207ENST00000589937 PRKAR2AP13861 404 aaKnown RBP15.25■□□□□ 0.03
RFX1-207ENST00000589937 MAPK4P31152 587 aa15.25■□□□□ 0.03
RFX1-207ENST00000589937 ICA1Q05084 483 aa15.25■□□□□ 0.03
RFX1-207ENST00000589937 MORN1Q5T089 497 aa15.25■□□□□ 0.03
RFX1-207ENST00000589937 WDR78Q5VTH9 848 aa15.25■□□□□ 0.03
RFX1-207ENST00000589937 CTR9Q6PD62 1173 aa15.25■□□□□ 0.03
RFX1-207ENST00000589937 TMEM179Q6ZVK1 233 aa15.25■□□□□ 0.03
RFX1-207ENST00000589937 C16orf86Q6ZW13 317 aa15.25■□□□□ 0.03
RFX1-207ENST00000589937 KBTBD3Q8NAB2 608 aa15.25■□□□□ 0.03
RFX1-207ENST00000589937 TANGO6Q9C0B7 1094 aa15.25■□□□□ 0.03
RFX1-207ENST00000589937 SWAP70Q9UH65 585 aa15.25■□□□□ 0.03
RFX1-207ENST00000589937 COLQQ9Y215 455 aaPredicted RBP15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms