RNA–Protein interactions for RNA: ENST00000581002.1

BRD2-216, Transcript of bromodomain containing 2, humanhuman

TSL 4

Gene BRD2, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD2-216ENST00000581002 USP17L24Q0WX57 530 aa24.28■■□□□ 1.48
BRD2-216ENST00000581002 ZSCAN25Q6NSZ9 544 aa24.28■■□□□ 1.48
BRD2-216ENST00000581002 AMOTL1Q8IY63 956 aa24.28■■□□□ 1.48
BRD2-216ENST00000581002 ACER1Q8TDN7 264 aa24.28■■□□□ 1.48
BRD2-216ENST00000581002 DDRGK1Q96HY6 314 aa24.28■■□□□ 1.48
BRD2-216ENST00000581002 DEFB118Q96PH6 123 aa24.28■■□□□ 1.48
BRD2-216ENST00000581002 TXNRD2Q9NNW7 524 aa24.28■■□□□ 1.48
BRD2-216ENST00000581002 DOCK3Q8IZD9 2030 aa24.28■■□□□ 1.48
BRD2-216ENST00000581002 PRKAB2O43741 272 aa24.27■■□□□ 1.48
BRD2-216ENST00000581002 CYP2D6P10635 497 aa24.27■■□□□ 1.48
BRD2-216ENST00000581002 CYP2B6P20813 491 aa24.27■■□□□ 1.48
BRD2-216ENST00000581002 ERVK-9P63128 1117 aa24.27■■□□□ 1.48
BRD2-216ENST00000581002 ERVK-24P63145 666 aa24.27■■□□□ 1.48
BRD2-216ENST00000581002 EVX2Q03828 476 aa24.27■■□□□ 1.48
BRD2-216ENST00000581002 SEPT2Q15019 361 aa24.27■■□□□ 1.48
BRD2-216ENST00000581002 GPATCH3Q96I76 525 aa24.27■■□□□ 1.48
BRD2-216ENST00000581002 KIAA1683Q9H0B3 1180 aa24.27■■□□□ 1.48
BRD2-216ENST00000581002 ATP8A2Q9NTI2 1148 aa24.27■■□□□ 1.48
BRD2-216ENST00000581002 RBPJLQ9UBG7 517 aa24.27■■□□□ 1.48
BRD2-216ENST00000581002 HMGCRP04035 888 aa24.26■■□□□ 1.47
BRD2-216ENST00000581002 MAPK4P31152 587 aa24.26■■□□□ 1.47
BRD2-216ENST00000581002 GABPAQ06546 454 aa24.26■■□□□ 1.47
BRD2-216ENST00000581002 C12orf42Q96LP6 360 aa24.26■■□□□ 1.47
BRD2-216ENST00000581002 NUDT12Q9BQG2 462 aa24.26■■□□□ 1.47
BRD2-216ENST00000581002 ECHDC1Q9NTX5 307 aa24.26■■□□□ 1.47
BRD2-216ENST00000581002 GJD2Q9UKL4 321 aa24.26■■□□□ 1.47
BRD2-216ENST00000581002 FARP2O94887 1054 aaPredicted RBP24.25■■□□□ 1.47
BRD2-216ENST00000581002 UBE3CQ15386 1083 aa24.25■■□□□ 1.47
BRD2-216ENST00000581002 Q3C1V9 767 aa24.25■■□□□ 1.47
BRD2-216ENST00000581002 HTATIP2Q9BUP3 242 aa24.25■■□□□ 1.47
BRD2-216ENST00000581002 SWAP70Q9UH65 585 aa24.25■■□□□ 1.47
BRD2-216ENST00000581002 CHGBP05060 677 aa24.24■■□□□ 1.47
BRD2-216ENST00000581002 VCAM1P19320 739 aa24.24■■□□□ 1.47
BRD2-216ENST00000581002 GUCY1A2P33402 732 aa24.24■■□□□ 1.47
BRD2-216ENST00000581002 CATSPERGQ6ZRH7 1159 aa24.24■■□□□ 1.47
BRD2-216ENST00000581002 SLC44A5Q8NCS7 719 aa24.24■■□□□ 1.47
BRD2-216ENST00000581002 SOCS4Q8WXH5 440 aa24.24■■□□□ 1.47
BRD2-216ENST00000581002 DYNLL2Q96FJ2 89 aa24.24■■□□□ 1.47
BRD2-216ENST00000581002 SLC4A4Q9Y6R1 1079 aa24.24■■□□□ 1.47
BRD2-216ENST00000581002 DDX60LQ5H9U9 1706 aaKnown RBP24.24■■□□□ 1.47
BRD2-216ENST00000581002 WDR78Q5VTH9 848 aa24.23■■□□□ 1.47
BRD2-216ENST00000581002 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.23■■□□□ 1.473e-6■■□□□ 12.6
BRD2-216ENST00000581002 PORCNQ9H237 461 aa24.23■■□□□ 1.47
BRD2-216ENST00000581002 RPAP3Q9H6T3 665 aaPredicted RBP24.23■■□□□ 1.47
BRD2-216ENST00000581002 DCTPP1Q9H773 170 aa24.23■■□□□ 1.47
BRD2-216ENST00000581002 H0YGN5 161 aa24.22■■□□□ 1.47
BRD2-216ENST00000581002 CCNA1P78396 465 aa24.22■■□□□ 1.47
BRD2-216ENST00000581002 TMEM179Q6ZVK1 233 aa24.22■■□□□ 1.47
BRD2-216ENST00000581002 HMX1Q9NP08 348 aaPredicted RBP24.22■■□□□ 1.47
BRD2-216ENST00000581002 PAK6Q9NQU5 681 aaPredicted RBP24.22■■□□□ 1.47
BRD2-216ENST00000581002 RABGAP1Q9Y3P9 1069 aa24.22■■□□□ 1.47
BRD2-216ENST00000581002 USP17L12C9JPN9 530 aa24.21■■□□□ 1.47
BRD2-216ENST00000581002 USP17L21D6R901 530 aa24.21■■□□□ 1.47
BRD2-216ENST00000581002 TRIM32Q13049 653 aa24.21■■□□□ 1.47
BRD2-216ENST00000581002 GPR142Q7Z601 462 aa24.21■■□□□ 1.47
BRD2-216ENST00000581002 PLEKHH3Q7Z736 793 aa24.21■■□□□ 1.47
BRD2-216ENST00000581002 RPTORQ8N122 1335 aa24.2■■□□□ 1.46
BRD2-216ENST00000581002 CYP2D7A0A087X1C5 515 aa24.2■■□□□ 1.46
BRD2-216ENST00000581002 GLRX3O76003 335 aaKnown RBP24.2■■□□□ 1.46
BRD2-216ENST00000581002 CAPN2P17655 700 aa24.2■■□□□ 1.46
BRD2-216ENST00000581002 HABP4Q5JVS0 413 aaKnown RBP24.2■■□□□ 1.46
BRD2-216ENST00000581002 TSHZ3Q63HK5 1081 aa24.2■■□□□ 1.46
BRD2-216ENST00000581002 TRIB2Q92519 343 aa24.2■■□□□ 1.46
BRD2-216ENST00000581002 TANGO6Q9C0B7 1094 aa24.2■■□□□ 1.46
BRD2-216ENST00000581002 PUS7LQ9H0K6 701 aaKnown RBP24.2■■□□□ 1.46
BRD2-216ENST00000581002 A0A1W2PRG0 241 aa24.19■■□□□ 1.46
BRD2-216ENST00000581002 ZKSCAN1P17029 563 aaPredicted RBP24.19■■□□□ 1.46
BRD2-216ENST00000581002 RGS2P41220 211 aa24.19■■□□□ 1.46
BRD2-216ENST00000581002 C12orf60Q5U649 245 aa24.19■■□□□ 1.46
BRD2-216ENST00000581002 POTEEQ6S8J3 1075 aa24.19■■□□□ 1.46
BRD2-216ENST00000581002 UBE2Q1Q7Z7E8 422 aa24.19■■□□□ 1.46
BRD2-216ENST00000581002 ARHGEF10LQ9HCE6 1279 aa24.19■■□□□ 1.46
BRD2-216ENST00000581002 MYH7P12883 1935 aa24.18■■□□□ 1.46
BRD2-216ENST00000581002 BAZ2AQ9UIF9 1905 aaKnown RBP24.18■■□□□ 1.46
BRD2-216ENST00000581002 XRCC5P13010 732 aaKnown RBP24.18■■□□□ 1.46
BRD2-216ENST00000581002 AKR1B1P15121 316 aa24.18■■□□□ 1.46
BRD2-216ENST00000581002 CDK8P49336 464 aa24.18■■□□□ 1.46
BRD2-216ENST00000581002 TRMT44Q8IYL2 757 aaKnown RBP24.18■■□□□ 1.46
BRD2-216ENST00000581002 CCDC17Q96LX7 622 aa24.18■■□□□ 1.46
BRD2-216ENST00000581002 CNMDO75829 334 aa24.17■■□□□ 1.46
BRD2-216ENST00000581002 PRKAR2AP13861 404 aaKnown RBP24.17■■□□□ 1.46
BRD2-216ENST00000581002 ATP2B2Q01814 1243 aa24.17■■□□□ 1.46
BRD2-216ENST00000581002 ICA1Q05084 483 aa24.17■■□□□ 1.46
BRD2-216ENST00000581002 KBTBD3Q8NAB2 608 aa24.17■■□□□ 1.46
BRD2-216ENST00000581002 CRISPLD2Q9H0B8 497 aa24.17■■□□□ 1.46
BRD2-216ENST00000581002 SH2D4AQ9H788 454 aa24.17■■□□□ 1.46
BRD2-216ENST00000581002 IVNS1ABPQ9Y6Y0 642 aa24.17■■□□□ 1.46
BRD2-216ENST00000581002 MYH8P13535 1937 aa24.16■■□□□ 1.46
BRD2-216ENST00000581002 SPDYE16A6NNV3 312 aaPredicted RBP24.16■■□□□ 1.46
BRD2-216ENST00000581002 SMIM22K7EJ46 135 aa24.16■■□□□ 1.46
BRD2-216ENST00000581002 COG2Q14746 738 aa24.16■■□□□ 1.46
BRD2-216ENST00000581002 MORN1Q5T089 497 aa24.16■■□□□ 1.46
BRD2-216ENST00000581002 CTR9Q6PD62 1173 aa24.16■■□□□ 1.46
BRD2-216ENST00000581002 SAMD1Q6SPF0 538 aaPredicted RBP24.16■■□□□ 1.46
BRD2-216ENST00000581002 CLEC10AQ8IUN9 316 aa24.16■■□□□ 1.46
BRD2-216ENST00000581002 PAWRQ96IZ0 340 aaKnown RBP24.16■■□□□ 1.46
BRD2-216ENST00000581002 HOXC10Q9NYD6 342 aa24.16■■□□□ 1.46
BRD2-216ENST00000581002 BTBD7Q9P203 1132 aa24.16■■□□□ 1.46
BRD2-216ENST00000581002 COLQQ9Y215 455 aaPredicted RBP24.16■■□□□ 1.46
BRD2-216ENST00000581002 PCDHB15Q9Y5E8 787 aa24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms