RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 RHBDL3P58872 404 aa12.82□□□□□ -0.36
SKA2-204ENST00000578519 DOK7Q18PE1 504 aa12.82□□□□□ -0.36
SKA2-204ENST00000578519 HS1BP3Q53T59 392 aa12.82□□□□□ -0.36
SKA2-204ENST00000578519 OTUD7BQ6GQQ9 843 aa12.82□□□□□ -0.36
SKA2-204ENST00000578519 USP17L1Q7RTZ2 530 aa12.82□□□□□ -0.36
SKA2-204ENST00000578519 DIS3L2Q8IYB7 885 aaKnown RBP12.82□□□□□ -0.36
SKA2-204ENST00000578519 FSIP1Q8NA03 581 aa12.82□□□□□ -0.36
SKA2-204ENST00000578519 PNMA1Q8ND90 353 aa12.82□□□□□ -0.36
SKA2-204ENST00000578519 PGBD1Q96JS3 809 aa12.82□□□□□ -0.36
SKA2-204ENST00000578519 DHX36Q9H2U1 1008 aaKnown RBP12.82□□□□□ -0.36
SKA2-204ENST00000578519 RGS17Q9UGC6 210 aaPredicted RBP12.82□□□□□ -0.36
SKA2-204ENST00000578519 DAGLAQ9Y4D2 1042 aa12.82□□□□□ -0.36
SKA2-204ENST00000578519 FLT1P17948 1338 aa12.82□□□□□ -0.36
SKA2-204ENST00000578519 PPFIA3O75145 1194 aa12.81□□□□□ -0.36
SKA2-204ENST00000578519 TOP1P11387 765 aaKnown RBP12.81□□□□□ -0.36
SKA2-204ENST00000578519 CMA1P23946 247 aa12.81□□□□□ -0.36
SKA2-204ENST00000578519 CCDC93Q567U6 631 aa12.81□□□□□ -0.36
SKA2-204ENST00000578519 GALNT17Q6IS24 598 aa12.81□□□□□ -0.36
SKA2-204ENST00000578519 TTLL6Q8N841 843 aa12.81□□□□□ -0.36
SKA2-204ENST00000578519 CCDC148Q8NFR7 591 aa12.81□□□□□ -0.36
SKA2-204ENST00000578519 CCDC12Q8WUD4 166 aaPredicted RBP12.81□□□□□ -0.36
SKA2-204ENST00000578519 CCDC17Q96LX7 622 aa12.81□□□□□ -0.36
SKA2-204ENST00000578519 SDF4Q9BRK5 362 aa12.81□□□□□ -0.36
SKA2-204ENST00000578519 TRIM34Q9BYJ4 488 aa12.81□□□□□ -0.36
SKA2-204ENST00000578519 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.81□□□□□ -0.36
SKA2-204ENST00000578519 FAM13BQ9NYF5 915 aa12.81□□□□□ -0.36
SKA2-204ENST00000578519 SAP30BPQ9UHR5 308 aaKnown RBP12.81□□□□□ -0.36
SKA2-204ENST00000578519 PCDHA7Q9UN72 937 aa12.81□□□□□ -0.36
SKA2-204ENST00000578519 MORC2Q9Y6X9 1032 aaPredicted RBP12.81□□□□□ -0.36
SKA2-204ENST00000578519 V9GY48 417 aaPredicted RBP12.81□□□□□ -0.36
SKA2-204ENST00000578519 TNS1Q9HBL0 1735 aaKnown RBP12.8□□□□□ -0.36
SKA2-204ENST00000578519 ECE2O60344 883 aa12.8□□□□□ -0.36
SKA2-204ENST00000578519 KIAA2012Q0VF49 1180 aa12.8□□□□□ -0.36
SKA2-204ENST00000578519 GRM4Q14833 912 aa12.8□□□□□ -0.36
SKA2-204ENST00000578519 GRIK5Q16478 980 aa12.8□□□□□ -0.36
SKA2-204ENST00000578519 ILDR1Q86SU0 546 aaPredicted RBP12.8□□□□□ -0.36
SKA2-204ENST00000578519 CCDC82Q8N4S0 544 aa12.8□□□□□ -0.36
SKA2-204ENST00000578519 ZDHHC15Q96MV8 337 aa12.8□□□□□ -0.36
SKA2-204ENST00000578519 TIGD1Q96MW7 591 aa12.8□□□□□ -0.36
SKA2-204ENST00000578519 NAT10Q9H0A0 1025 aaKnown RBP12.8□□□□□ -0.36
SKA2-204ENST00000578519 SERPINA10Q9UK55 444 aa12.8□□□□□ -0.36
SKA2-204ENST00000578519 CLIC4Q9Y696 253 aa12.8□□□□□ -0.36
SKA2-204ENST00000578519 NR1I2O75469 434 aa12.79□□□□□ -0.36
SKA2-204ENST00000578519 GABBR2O75899 941 aa12.79□□□□□ -0.36
SKA2-204ENST00000578519 SCG2P13521 617 aa12.79□□□□□ -0.36
SKA2-204ENST00000578519 RASA1P20936 1047 aa12.79□□□□□ -0.36
SKA2-204ENST00000578519 CRKP46108 304 aa12.79□□□□□ -0.36
SKA2-204ENST00000578519 TRAPPC10P48553 1259 aa12.79□□□□□ -0.36
SKA2-204ENST00000578519 MMP14P50281 582 aa12.79□□□□□ -0.36
SKA2-204ENST00000578519 PLCD1P51178 756 aa12.79□□□□□ -0.36
SKA2-204ENST00000578519 NLRP5P59047 1200 aa12.79□□□□□ -0.36
SKA2-204ENST00000578519 RBM43Q6ZSC3 357 aaKnown RBP12.79□□□□□ -0.36
SKA2-204ENST00000578519 KRI1Q8N9T8 703 aaKnown RBP12.79□□□□□ -0.36
SKA2-204ENST00000578519 NKX2-3Q8TAU0 364 aa12.79□□□□□ -0.36
SKA2-204ENST00000578519 DYNLL2Q96FJ2 89 aa12.79□□□□□ -0.36
SKA2-204ENST00000578519 ANO8Q9HCE9 1232 aaPredicted RBP12.79□□□□□ -0.36
SKA2-204ENST00000578519 ANO10Q9NW15 660 aa12.79□□□□□ -0.36
SKA2-204ENST00000578519 TMOD2Q9NZR1 351 aa12.79□□□□□ -0.36
SKA2-204ENST00000578519 HDAC9Q9UKV0 1011 aa12.79□□□□□ -0.36
SKA2-204ENST00000578519 STX8Q9UNK0 236 aa12.79□□□□□ -0.36
SKA2-204ENST00000578519 TRIM75PA6NK02 468 aa12.78□□□□□ -0.36
SKA2-204ENST00000578519 BTBD18B2RXH4 712 aa12.78□□□□□ -0.36
SKA2-204ENST00000578519 KIF28PB7ZC32 967 aa12.78□□□□□ -0.36
SKA2-204ENST00000578519 F8W031 263 aaPredicted RBP12.78□□□□□ -0.36
SKA2-204ENST00000578519 hCG_1984214I3L0E3 225 aa12.78□□□□□ -0.36
SKA2-204ENST00000578519 PARP1P09874 1014 aaKnown RBP12.78□□□□□ -0.36
SKA2-204ENST00000578519 RBM5P52756 815 aaKnown RBP eCLIP12.78□□□□□ -0.36
SKA2-204ENST00000578519 TYRO3Q06418 890 aa12.78□□□□□ -0.36
SKA2-204ENST00000578519 FUT2Q10981 343 aa12.78□□□□□ -0.36
SKA2-204ENST00000578519 PFKFB3Q16875 520 aaPredicted RBP12.78□□□□□ -0.36
SKA2-204ENST00000578519 KANK3Q6NY19 840 aa12.78□□□□□ -0.36
SKA2-204ENST00000578519 FOXP4Q8IVH2 680 aaPredicted RBP12.78□□□□□ -0.36
SKA2-204ENST00000578519 ZNF713Q8N859 430 aaPredicted RBP12.78□□□□□ -0.36
SKA2-204ENST00000578519 ZNF579Q8NAF0 562 aaKnown RBP12.78□□□□□ -0.36
SKA2-204ENST00000578519 FAM200AQ8TCP9 573 aa12.78□□□□□ -0.36
SKA2-204ENST00000578519 AIFM3Q96NN9 605 aa12.78□□□□□ -0.36
SKA2-204ENST00000578519 PSMD1Q99460 953 aa12.78□□□□□ -0.36
SKA2-204ENST00000578519 PYM1Q9BRP8 204 aaKnown RBP12.78□□□□□ -0.36
SKA2-204ENST00000578519 PHF20Q9BVI0 1012 aa12.78□□□□□ -0.36
SKA2-204ENST00000578519 PANK2Q9BZ23 570 aa12.78□□□□□ -0.36
SKA2-204ENST00000578519 EHD4Q9H223 541 aa12.78□□□□□ -0.36
SKA2-204ENST00000578519 SERPINB13Q9UIV8 391 aa12.78□□□□□ -0.36
SKA2-204ENST00000578519 LAMB1P07942 1786 aa12.78□□□□□ -0.36
SKA2-204ENST00000578519 ANKRD31Q8N7Z5 1873 aa12.78□□□□□ -0.36
SKA2-204ENST00000578519 TCHHQ07283 1943 aa12.78□□□□□ -0.36
SKA2-204ENST00000578519 QSER1Q2KHR3 1735 aa12.77□□□□□ -0.36
SKA2-204ENST00000578519 PPIP5K2O43314 1243 aa12.77□□□□□ -0.37
SKA2-204ENST00000578519 TPM3P06753 285 aa12.77□□□□□ -0.37
SKA2-204ENST00000578519 POLD1P28340 1107 aa12.77□□□□□ -0.37
SKA2-204ENST00000578519 CHRNA5P30532 468 aa12.77□□□□□ -0.37
SKA2-204ENST00000578519 TGFB2P61812 414 aa12.77□□□□□ -0.37
SKA2-204ENST00000578519 TPM4P67936 248 aa12.77□□□□□ -0.37
SKA2-204ENST00000578519 PICALMQ13492 652 aa12.77□□□□□ -0.37
SKA2-204ENST00000578519 CAMK4Q16566 473 aa12.77□□□□□ -0.37
SKA2-204ENST00000578519 STX1AQ16623 288 aa12.77□□□□□ -0.37
SKA2-204ENST00000578519 RCSD1Q6JBY9 416 aa12.77□□□□□ -0.37
SKA2-204ENST00000578519 ELOA2Q8IYF1 753 aaPredicted RBP12.77□□□□□ -0.37
SKA2-204ENST00000578519 FAM43AQ8N2R8 423 aa12.77□□□□□ -0.37
SKA2-204ENST00000578519 SRBD1Q8N5C6 995 aaKnown RBP12.77□□□□□ -0.37
SKA2-204ENST00000578519 RNF214Q8ND24 703 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms