RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 MOGSQ13724 837 aa18.84■□□□□ 0.61
CHD3-215ENST00000572750 BMP2KLQ5H9B9 411 aa18.84■□□□□ 0.61
CHD3-215ENST00000572750 PRRT2Q7Z6L0 340 aaPredicted RBP18.84■□□□□ 0.61
CHD3-215ENST00000572750 KIAA0100Q14667 2235 aaKnown RBP18.84■□□□□ 0.61
CHD3-215ENST00000572750 ZMYM6O95789 1325 aa18.83■□□□□ 0.61
CHD3-215ENST00000572750 RAD50Q92878 1312 aa18.83■□□□□ 0.61
CHD3-215ENST00000572750 CXCL11O14625 94 aa18.83■□□□□ 0.6
CHD3-215ENST00000572750 GUCY1A2P33402 732 aa18.83■□□□□ 0.6
CHD3-215ENST00000572750 MTMR2Q13614 643 aa18.83■□□□□ 0.6
CHD3-215ENST00000572750 NOM1Q5C9Z4 860 aaKnown RBP18.83■□□□□ 0.6
CHD3-215ENST00000572750 CLEC10AQ8IUN9 316 aa18.83■□□□□ 0.6
CHD3-215ENST00000572750 AS3MTQ9HBK9 375 aa18.83■□□□□ 0.6
CHD3-215ENST00000572750 GINM1Q9NU53 330 aa18.83■□□□□ 0.6
CHD3-215ENST00000572750 TAOK2Q9UL54 1235 aa18.83■□□□□ 0.6
CHD3-215ENST00000572750 BTBD19C9JJ37 291 aa18.82■□□□□ 0.6
CHD3-215ENST00000572750 PRDM1O75626 825 aa18.82■□□□□ 0.6
CHD3-215ENST00000572750 FGAP02671 866 aa18.82■□□□□ 0.6
CHD3-215ENST00000572750 HMGCS2P54868 508 aa18.82■□□□□ 0.6
CHD3-215ENST00000572750 CTDSPL2Q05D32 466 aa18.82■□□□□ 0.6
CHD3-215ENST00000572750 SEPT2Q15019 361 aa18.82■□□□□ 0.6
CHD3-215ENST00000572750 ALX1Q15699 326 aa18.82■□□□□ 0.6
CHD3-215ENST00000572750 GADL1Q6ZQY3 521 aa18.82■□□□□ 0.6
CHD3-215ENST00000572750 TBC1D2Q9BYX2 928 aa18.82■□□□□ 0.6
CHD3-215ENST00000572750 CABP5Q9NP86 173 aa18.82■□□□□ 0.6
CHD3-215ENST00000572750 ALDH1A1P00352 501 aa18.81■□□□□ 0.6
CHD3-215ENST00000572750 EN2P19622 333 aaPredicted RBP18.81■□□□□ 0.6
CHD3-215ENST00000572750 RASA1P20936 1047 aa18.81■□□□□ 0.6
CHD3-215ENST00000572750 TMEM179Q6ZVK1 233 aa18.81■□□□□ 0.6
CHD3-215ENST00000572750 WDR18Q9BV38 432 aa18.81■□□□□ 0.6
CHD3-215ENST00000572750 HAND2P61296 217 aa18.8■□□□□ 0.6
CHD3-215ENST00000572750 CRHR2Q13324 411 aa18.8■□□□□ 0.6
CHD3-215ENST00000572750 OTUD7BQ6GQQ9 843 aa18.8■□□□□ 0.6
CHD3-215ENST00000572750 GPAT2Q6NUI2 795 aa18.8■□□□□ 0.6
CHD3-215ENST00000572750 ACER1Q8TDN7 264 aa18.8■□□□□ 0.6
CHD3-215ENST00000572750 RUFY2Q8WXA3 655 aa18.8■□□□□ 0.6
CHD3-215ENST00000572750 FEZ1Q99689 392 aa18.8■□□□□ 0.6
CHD3-215ENST00000572750 MKNK2Q9HBH9 465 aa18.8■□□□□ 0.6
CHD3-215ENST00000572750 UNC80Q8N2C7 3258 aa18.8■□□□□ 0.6
CHD3-215ENST00000572750 MYH4Q9Y623 1939 aa18.79■□□□□ 0.6
CHD3-215ENST00000572750 PDHXO00330 501 aa18.79■□□□□ 0.6
CHD3-215ENST00000572750 SGSM2O43147 1006 aa18.79■□□□□ 0.6
CHD3-215ENST00000572750 SLC3A2P08195 630 aaKnown RBP18.79■□□□□ 0.6
CHD3-215ENST00000572750 BACE1P56817 501 aa18.79■□□□□ 0.6
CHD3-215ENST00000572750 TAF1CQ15572 869 aaPredicted RBP18.79■□□□□ 0.6
CHD3-215ENST00000572750 ZYXQ15942 572 aaKnown RBP18.79■□□□□ 0.6
CHD3-215ENST00000572750 TREML2Q5T2D2 321 aa18.79■□□□□ 0.6
CHD3-215ENST00000572750 ANKRD23Q86SG2 305 aa18.79■□□□□ 0.6
CHD3-215ENST00000572750 CCDC17Q96LX7 622 aa18.79■□□□□ 0.6
CHD3-215ENST00000572750 DSCC1Q9BVC3 393 aa18.79■□□□□ 0.6
CHD3-215ENST00000572750 FKTNO75072 461 aa18.78■□□□□ 0.6
CHD3-215ENST00000572750 ICA1Q05084 483 aa18.78■□□□□ 0.6
CHD3-215ENST00000572750 PDE4BQ07343 736 aa18.78■□□□□ 0.6
CHD3-215ENST00000572750 FASTKD5Q7L8L6 764 aaKnown RBP18.78■□□□□ 0.6
CHD3-215ENST00000572750 TBC1D10CQ8IV04 446 aa18.78■□□□□ 0.6
CHD3-215ENST00000572750 CFHR5Q9BXR6 569 aa18.78■□□□□ 0.6
CHD3-215ENST00000572750 NBPF3Q9H094 633 aa18.78■□□□□ 0.6
CHD3-215ENST00000572750 INCENPQ9NQS7 918 aa18.78■□□□□ 0.6
CHD3-215ENST00000572750 ANAPC4Q9UJX5 808 aa18.78■□□□□ 0.6
CHD3-215ENST00000572750 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.78■□□□□ 0.6
CHD3-215ENST00000572750 TACC3Q9Y6A5 838 aa18.78■□□□□ 0.6
CHD3-215ENST00000572750 ZSWIM8A7E2V4 1837 aa18.77■□□□□ 0.6
CHD3-215ENST00000572750 USP17L10C9JJH3 530 aa18.77■□□□□ 0.6
CHD3-215ENST00000572750 SH3D19Q5HYK7 790 aa18.77■□□□□ 0.6
CHD3-215ENST00000572750 PROCA1Q8NCQ7 364 aaPredicted RBP18.77■□□□□ 0.6
CHD3-215ENST00000572750 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.77■□□□□ 0.6
CHD3-215ENST00000572750 ZNF287Q9HBT7 754 aa18.77■□□□□ 0.6
CHD3-215ENST00000572750 ZCCHC17Q9NP64 241 aaKnown RBP18.77■□□□□ 0.6
CHD3-215ENST00000572750 AGTPBP1Q9UPW5 1226 aa18.77■□□□□ 0.6
CHD3-215ENST00000572750 PLIN4Q96Q06 1357 aa18.77■□□□□ 0.6
CHD3-215ENST00000572750 A0A1W2PRG0 241 aa18.76■□□□□ 0.59
CHD3-215ENST00000572750 CDC45O75419 566 aa18.76■□□□□ 0.59
CHD3-215ENST00000572750 CYP2C8P10632 490 aa18.76■□□□□ 0.59
CHD3-215ENST00000572750 PTH1RQ03431 593 aa18.76■□□□□ 0.59
CHD3-215ENST00000572750 FAM47AQ5JRC9 791 aa18.76■□□□□ 0.59
CHD3-215ENST00000572750 ZNF444Q8N0Y2 327 aaPredicted RBP18.76■□□□□ 0.59
CHD3-215ENST00000572750 KIAA1683Q9H0B3 1180 aa18.76■□□□□ 0.59
CHD3-215ENST00000572750 TMOD4Q9NZQ9 345 aa18.76■□□□□ 0.59
CHD3-215ENST00000572750 CAP1Q01518 475 aa18.75■□□□□ 0.59
CHD3-215ENST00000572750 ATP2B2Q01814 1243 aa18.75■□□□□ 0.59
CHD3-215ENST00000572750 OTOP1Q7RTM1 612 aa18.75■□□□□ 0.59
CHD3-215ENST00000572750 PARK7Q99497 189 aaKnown RBP18.75■□□□□ 0.59
CHD3-215ENST00000572750 ESYT1Q9BSJ8 1104 aa18.75■□□□□ 0.59
CHD3-215ENST00000572750 ZFYVE28Q9HCC9 887 aa18.75■□□□□ 0.59
CHD3-215ENST00000572750 TOMM22Q9NS69 142 aa18.75■□□□□ 0.59
CHD3-215ENST00000572750 EMILIN3Q9NT22 766 aa18.75■□□□□ 0.59
CHD3-215ENST00000572750 NEDD4P46934 1319 aa18.74■□□□□ 0.59
CHD3-215ENST00000572750 ADGRA2Q96PE1 1338 aa18.74■□□□□ 0.59
CHD3-215ENST00000572750 C19orf81C9J6K1 198 aa18.74■□□□□ 0.59
CHD3-215ENST00000572750 TSPY3P0CV98 308 aa18.74■□□□□ 0.59
CHD3-215ENST00000572750 TSPY8P0CW00 308 aa18.74■□□□□ 0.59
CHD3-215ENST00000572750 EEF2P13639 858 aaKnown RBP18.74■□□□□ 0.59
CHD3-215ENST00000572750 RRP12Q5JTH9 1297 aaKnown RBP18.74■□□□□ 0.59
CHD3-215ENST00000572750 USP17L2Q6R6M4 530 aa18.74■□□□□ 0.59
CHD3-215ENST00000572750 SIAH1Q8IUQ4 282 aa18.74■□□□□ 0.59
CHD3-215ENST00000572750 KANSL2Q9H9L4 492 aa18.74■□□□□ 0.59
CHD3-215ENST00000572750 ARHGEF10LQ9HCE6 1279 aa18.74■□□□□ 0.59
CHD3-215ENST00000572750 TRIM17Q9Y577 477 aa18.74■□□□□ 0.59
CHD3-215ENST00000572750 PARP14Q460N5 1801 aa18.73■□□□□ 0.59
CHD3-215ENST00000572750 IGKV6D-41A0A0C4DH26 115 aa18.73■□□□□ 0.59
CHD3-215ENST00000572750 H0YGN5 161 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms