RNA–Protein interactions for RNA: ENST00000572555.5

TRIM16L-209, Transcript of tripartite motif containing 16 like, humanhuman

TSL 2

Gene TRIM16L, Length 1,809 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM16L-209ENST00000572555 LONRF3Q496Y0 759 aa13.48□□□□□ -0.25
TRIM16L-209ENST00000572555 SBK1Q52WX2 424 aa13.48□□□□□ -0.25
TRIM16L-209ENST00000572555 SMIM5Q71RC9 77 aa13.48□□□□□ -0.25
TRIM16L-209ENST00000572555 CCDC82Q8N4S0 544 aa13.48□□□□□ -0.25
TRIM16L-209ENST00000572555 SHISA4Q96DD7 197 aa13.48□□□□□ -0.25
TRIM16L-209ENST00000572555 PHF20Q9BVI0 1012 aa13.48□□□□□ -0.25
TRIM16L-209ENST00000572555 HSD3B7Q9H2F3 369 aa13.48□□□□□ -0.25
TRIM16L-209ENST00000572555 DCP1AQ9NPI6 582 aaPredicted RBP13.48□□□□□ -0.25
TRIM16L-209ENST00000572555 ARPP21Q9UBL0 812 aaPredicted RBP13.48□□□□□ -0.25
TRIM16L-209ENST00000572555 RTCBQ9Y3I0 505 aaKnown RBP13.48□□□□□ -0.25
TRIM16L-209ENST00000572555 USP17L12C9JPN9 530 aa13.48□□□□□ -0.25
TRIM16L-209ENST00000572555 USP17L21D6R901 530 aa13.48□□□□□ -0.25
TRIM16L-209ENST00000572555 MDM2Q00987 491 aaPredicted RBP13.48□□□□□ -0.25
TRIM16L-209ENST00000572555 TXNRD1Q16881 649 aa13.48□□□□□ -0.25
TRIM16L-209ENST00000572555 NYAP1Q6ZVC0 841 aa13.48□□□□□ -0.25
TRIM16L-209ENST00000572555 TMC6Q7Z403 805 aa13.48□□□□□ -0.25
TRIM16L-209ENST00000572555 CCAR2Q8N163 923 aaKnown RBP13.48□□□□□ -0.25
TRIM16L-209ENST00000572555 CCDC112Q8NEF3 446 aa13.48□□□□□ -0.25
TRIM16L-209ENST00000572555 OXER1Q8TDS5 423 aa13.48□□□□□ -0.25
TRIM16L-209ENST00000572555 ANKRD7Q92527 254 aa13.48□□□□□ -0.25
TRIM16L-209ENST00000572555 TSC1Q92574 1164 aa13.48□□□□□ -0.25
TRIM16L-209ENST00000572555 CCNL1Q9UK58 526 aaPredicted RBP13.48□□□□□ -0.25
TRIM16L-209ENST00000572555 PCDHB6Q9Y5E3 794 aa13.48□□□□□ -0.25
TRIM16L-209ENST00000572555 SRPRBQ9Y5M8 271 aaKnown RBP13.48□□□□□ -0.25
TRIM16L-209ENST00000572555 TUBB4AP04350 444 aa13.47□□□□□ -0.25
TRIM16L-209ENST00000572555 PRDX5P30044 214 aa13.47□□□□□ -0.25
TRIM16L-209ENST00000572555 KRT2P35908 639 aa13.47□□□□□ -0.25
TRIM16L-209ENST00000572555 NT5C2P49902 561 aa13.47□□□□□ -0.25
TRIM16L-209ENST00000572555 EN1Q05925 392 aaPredicted RBP13.47□□□□□ -0.25
TRIM16L-209ENST00000572555 KANK3Q6NY19 840 aa13.47□□□□□ -0.25
TRIM16L-209ENST00000572555 TMTC3Q6ZXV5 915 aa13.47□□□□□ -0.25
TRIM16L-209ENST00000572555 TFCP2L1Q9NZI6 479 aa13.47□□□□□ -0.25
TRIM16L-209ENST00000572555 NAV1Q8NEY1 1877 aa13.47□□□□□ -0.25
TRIM16L-209ENST00000572555 CNTNAP5Q8WYK1 1306 aa13.47□□□□□ -0.25
TRIM16L-209ENST00000572555 PRDM1O75626 825 aa13.46□□□□□ -0.25
TRIM16L-209ENST00000572555 PLEKHA8P1O95397 391 aa13.46□□□□□ -0.25
TRIM16L-209ENST00000572555 GRIN1Q05586 938 aa13.46□□□□□ -0.25
TRIM16L-209ENST00000572555 NT5DC1Q5TFE4 455 aa13.46□□□□□ -0.25
TRIM16L-209ENST00000572555 SPTY2D1Q68D10 685 aaPredicted RBP13.46□□□□□ -0.25
TRIM16L-209ENST00000572555 ISM2Q6H9L7 571 aa13.46□□□□□ -0.25
TRIM16L-209ENST00000572555 DEFB132Q7Z7B7 95 aa13.46□□□□□ -0.25
TRIM16L-209ENST00000572555 FOXP4Q8IVH2 680 aaPredicted RBP13.46□□□□□ -0.25
TRIM16L-209ENST00000572555 PROM2Q8N271 834 aa13.46□□□□□ -0.25
TRIM16L-209ENST00000572555 ARHGEF1Q92888 912 aaKnown RBP13.46□□□□□ -0.25
TRIM16L-209ENST00000572555 CCDC94Q9BW85 323 aaPredicted RBP13.46□□□□□ -0.25
TRIM16L-209ENST00000572555 AATFQ9NY61 560 aaKnown RBP eCLIP13.46□□□□□ -0.25
TRIM16L-209ENST00000572555 PCDHA5Q9Y5H7 936 aa13.46□□□□□ -0.25
TRIM16L-209ENST00000572555 PSDA5PKW4 1024 aaPredicted RBP13.46□□□□□ -0.26
TRIM16L-209ENST00000572555 BMP15O95972 392 aa13.46□□□□□ -0.26
TRIM16L-209ENST00000572555 SFPQP23246 707 aaKnown RBP eCLIP13.46□□□□□ -0.26
TRIM16L-209ENST00000572555 POSTNQ15063 836 aa13.46□□□□□ -0.26
TRIM16L-209ENST00000572555 CABP5Q9NP86 173 aa13.46□□□□□ -0.26
TRIM16L-209ENST00000572555 VPS54Q9P1Q0 977 aa13.46□□□□□ -0.26
TRIM16L-209ENST00000572555 DACH1Q9UI36 760 aa13.46□□□□□ -0.26
TRIM16L-209ENST00000572555 TRIM75PA6NK02 468 aa13.45□□□□□ -0.26
TRIM16L-209ENST00000572555 LMOD1P29536 600 aaPredicted RBP13.45□□□□□ -0.26
TRIM16L-209ENST00000572555 UBASH3AP57075 661 aa13.45□□□□□ -0.26
TRIM16L-209ENST00000572555 EZH2Q15910 746 aaKnown RBP13.45□□□□□ -0.26
TRIM16L-209ENST00000572555 ARMCX5Q6P1M9 558 aa13.45□□□□□ -0.26
TRIM16L-209ENST00000572555 AMIGO3Q86WK7 504 aa13.45□□□□□ -0.26
TRIM16L-209ENST00000572555 TRIML1Q8N9V2 468 aa13.45□□□□□ -0.26
TRIM16L-209ENST00000572555 MLKLQ8NB16 471 aa13.45□□□□□ -0.26
TRIM16L-209ENST00000572555 TNFRSF25Q93038 417 aa13.45□□□□□ -0.26
TRIM16L-209ENST00000572555 CDK5RAP2Q96SN8 1893 aa13.44□□□□□ -0.26
TRIM16L-209ENST00000572555 ROBO3Q96MS0 1386 aa13.44□□□□□ -0.26
TRIM16L-209ENST00000572555 USP27XA6NNY8 438 aa13.44□□□□□ -0.26
TRIM16L-209ENST00000572555 CCP110O43303 1012 aa13.44□□□□□ -0.26
TRIM16L-209ENST00000572555 ACTN4O43707 911 aaKnown RBP13.44□□□□□ -0.26
TRIM16L-209ENST00000572555 SERPINC1P01008 464 aa13.44□□□□□ -0.26
TRIM16L-209ENST00000572555 SARSP49591 514 aaKnown RBP13.44□□□□□ -0.26
TRIM16L-209ENST00000572555 PDE4BQ07343 736 aa13.44□□□□□ -0.26
TRIM16L-209ENST00000572555 NPY5RQ15761 445 aa13.44□□□□□ -0.26
TRIM16L-209ENST00000572555 SPECC1Q5M775 1068 aa13.44□□□□□ -0.26
TRIM16L-209ENST00000572555 TXNRD3Q86VQ6 643 aa13.44□□□□□ -0.26
TRIM16L-209ENST00000572555 CTCFLQ8NI51 663 aaPredicted RBP13.44□□□□□ -0.26
TRIM16L-209ENST00000572555 CCDC34Q96HJ3 373 aa13.44□□□□□ -0.26
TRIM16L-209ENST00000572555 BRMS1Q9HCU9 246 aa13.44□□□□□ -0.26
TRIM16L-209ENST00000572555 MAN1B1Q9UKM7 699 aa13.44□□□□□ -0.26
TRIM16L-209ENST00000572555 LEMD3Q9Y2U8 911 aa13.44□□□□□ -0.26
TRIM16L-209ENST00000572555 V9GY48 417 aaPredicted RBP13.44□□□□□ -0.26
TRIM16L-209ENST00000572555 UBR3Q6ZT12 1888 aa13.43□□□□□ -0.26
TRIM16L-209ENST00000572555 FOXN1O15353 648 aa13.43□□□□□ -0.26
TRIM16L-209ENST00000572555 POLR2DO15514 142 aaKnown RBP13.43□□□□□ -0.26
TRIM16L-209ENST00000572555 ATP1A3P13637 1013 aa13.43□□□□□ -0.26
TRIM16L-209ENST00000572555 BMP6P22004 513 aa13.43□□□□□ -0.26
TRIM16L-209ENST00000572555 EVX2Q03828 476 aa13.43□□□□□ -0.26
TRIM16L-209ENST00000572555 GRAPQ13588 217 aa13.43□□□□□ -0.26
TRIM16L-209ENST00000572555 CT47A1Q5JQC4 288 aaPredicted RBP13.43□□□□□ -0.26
TRIM16L-209ENST00000572555 DZIP1Q86YF9 867 aaKnown RBP13.43□□□□□ -0.26
TRIM16L-209ENST00000572555 PDCL2Q8N4E4 241 aa13.43□□□□□ -0.26
TRIM16L-209ENST00000572555 KIF18AQ8NI77 898 aa13.43□□□□□ -0.26
TRIM16L-209ENST00000572555 GRAPLQ8TC17 118 aaPredicted RBP13.43□□□□□ -0.26
TRIM16L-209ENST00000572555 CSRNP2Q9H175 543 aa13.43□□□□□ -0.26
TRIM16L-209ENST00000572555 LRRC4BQ9NT99 713 aa13.43□□□□□ -0.26
TRIM16L-209ENST00000572555 MKRN1Q9UHC7 482 aaKnown RBP13.43□□□□□ -0.26
TRIM16L-209ENST00000572555 SERTAD1Q9UHV2 236 aa13.43□□□□□ -0.26
TRIM16L-209ENST00000572555 DDX60LQ5H9U9 1706 aaKnown RBP13.43□□□□□ -0.26
TRIM16L-209ENST00000572555 FAM205CA6NFA0 338 aa13.43□□□□□ -0.26
TRIM16L-209ENST00000572555 CYP2D6P10635 497 aa13.43□□□□□ -0.26
TRIM16L-209ENST00000572555 MORC3Q14149 939 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms