RNA–Protein interactions for RNA: ENST00000568535.1

BBS4-214, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 2

Gene BBS4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-214ENST00000568535 FAM198AQ9UFP1 575 aa9.57□□□□□ -0.88
BBS4-214ENST00000568535 H7C1D1 291 aa9.56□□□□□ -0.88
BBS4-214ENST00000568535 DEXIO95424 95 aa9.56□□□□□ -0.88
BBS4-214ENST00000568535 TOP1P11387 765 aaKnown RBP9.56□□□□□ -0.88
BBS4-214ENST00000568535 RXRAP19793 462 aa9.56□□□□□ -0.88
BBS4-214ENST00000568535 CDC27P30260 824 aa9.56□□□□□ -0.88
BBS4-214ENST00000568535 ZNF280AP59817 542 aaPredicted RBP9.56□□□□□ -0.88
BBS4-214ENST00000568535 RASSF7Q02833 373 aa9.56□□□□□ -0.88
BBS4-214ENST00000568535 TROAPQ12815 778 aa9.56□□□□□ -0.88
BBS4-214ENST00000568535 TNFAIP1Q13829 316 aa9.56□□□□□ -0.88
BBS4-214ENST00000568535 SPDYE2Q495Y8 402 aa9.56□□□□□ -0.88
BBS4-214ENST00000568535 ATL3Q6DD88 541 aa9.56□□□□□ -0.88
BBS4-214ENST00000568535 FAM83AQ86UY5 434 aa9.56□□□□□ -0.88
BBS4-214ENST00000568535 RAB11FIP4Q86YS3 637 aa9.56□□□□□ -0.88
BBS4-214ENST00000568535 SLC44A5Q8NCS7 719 aa9.56□□□□□ -0.88
BBS4-214ENST00000568535 PNMA1Q8ND90 353 aa9.56□□□□□ -0.88
BBS4-214ENST00000568535 MYL10Q9BUA6 226 aa9.56□□□□□ -0.88
BBS4-214ENST00000568535 IL17RBQ9NRM6 502 aa9.56□□□□□ -0.88
BBS4-214ENST00000568535 ZNF70Q9UC06 446 aaPredicted RBP9.56□□□□□ -0.88
BBS4-214ENST00000568535 HERC5Q9UII4 1024 aaKnown RBP9.56□□□□□ -0.88
BBS4-214ENST00000568535 STX8Q9UNK0 236 aa9.56□□□□□ -0.88
BBS4-214ENST00000568535 GJA3Q9Y6H8 435 aa9.56□□□□□ -0.88
BBS4-214ENST00000568535 COL2A1P02458 1487 aaPredicted RBP9.55□□□□□ -0.88
BBS4-214ENST00000568535 ATRNL1Q5VV63 1379 aa9.55□□□□□ -0.88
BBS4-214ENST00000568535 TCP10L2B9ZVM9 353 aa9.55□□□□□ -0.88
BBS4-214ENST00000568535 MPHOSPH10O00566 681 aaKnown RBP9.55□□□□□ -0.88
BBS4-214ENST00000568535 NMT2O60551 498 aa9.55□□□□□ -0.88
BBS4-214ENST00000568535 FDPSP14324 419 aaKnown RBP9.55□□□□□ -0.88
BBS4-214ENST00000568535 CACNB3P54284 484 aa9.55□□□□□ -0.88
BBS4-214ENST00000568535 KRT85P78386 507 aa9.55□□□□□ -0.88
BBS4-214ENST00000568535 EVX2Q03828 476 aa9.55□□□□□ -0.88
BBS4-214ENST00000568535 SAFBQ15424 915 aaKnown RBP eCLIP9.55□□□□□ -0.88
BBS4-214ENST00000568535 NTRK3Q16288 839 aa9.55□□□□□ -0.88
BBS4-214ENST00000568535 CERKLQ49MI3 558 aaPredicted RBP9.55□□□□□ -0.88
BBS4-214ENST00000568535 FBXO18Q8NFZ0 1043 aa9.55□□□□□ -0.88
BBS4-214ENST00000568535 CSRNP1Q96S65 589 aa9.55□□□□□ -0.88
BBS4-214ENST00000568535 ALG1Q9BT22 464 aa9.55□□□□□ -0.88
BBS4-214ENST00000568535 SLC26A6Q9BXS9 759 aa9.55□□□□□ -0.88
BBS4-214ENST00000568535 RNF26Q9BY78 433 aaPredicted RBP9.55□□□□□ -0.88
BBS4-214ENST00000568535 VEZTQ9HBM0 779 aa9.55□□□□□ -0.88
BBS4-214ENST00000568535 CABP5Q9NP86 173 aa9.55□□□□□ -0.88
BBS4-214ENST00000568535 FAM217BQ9NTX9 383 aaPredicted RBP9.55□□□□□ -0.88
BBS4-214ENST00000568535 CFAP45Q9UL16 551 aa9.55□□□□□ -0.88
BBS4-214ENST00000568535 NAV1Q8NEY1 1877 aa9.55□□□□□ -0.88
BBS4-214ENST00000568535 BAZ2AQ9UIF9 1905 aaKnown RBP9.54□□□□□ -0.88
BBS4-214ENST00000568535 PLIN4Q96Q06 1357 aa9.54□□□□□ -0.88
BBS4-214ENST00000568535 FER1L6Q2WGJ9 1857 aa9.54□□□□□ -0.88
BBS4-214ENST00000568535 CLRN2A0PK11 232 aa9.54□□□□□ -0.88
BBS4-214ENST00000568535 PRPF3O43395 683 aaKnown RBP9.54□□□□□ -0.88
BBS4-214ENST00000568535 TRAK2O60296 914 aa9.54□□□□□ -0.88
BBS4-214ENST00000568535 TTLL1O95922 423 aa9.54□□□□□ -0.88
BBS4-214ENST00000568535 SHMT1P34896 483 aa9.54□□□□□ -0.88
BBS4-214ENST00000568535 GMPSP49915 693 aaPredicted RBP9.54□□□□□ -0.88
BBS4-214ENST00000568535 MKRN4PQ13434 485 aaPredicted RBP9.54□□□□□ -0.88
BBS4-214ENST00000568535 GNL2Q13823 731 aaKnown RBP9.54□□□□□ -0.88
BBS4-214ENST00000568535 RBM26Q5T8P6 1007 aaKnown RBP9.54□□□□□ -0.88
BBS4-214ENST00000568535 RCSD1Q6JBY9 416 aa9.54□□□□□ -0.88
BBS4-214ENST00000568535 TATDN1Q6P1N9 297 aa9.54□□□□□ -0.88
BBS4-214ENST00000568535 CDC37L1Q7L3B6 337 aa9.54□□□□□ -0.88
BBS4-214ENST00000568535 BRAPQ7Z569 592 aa9.54□□□□□ -0.88
BBS4-214ENST00000568535 METTL16Q86W50 562 aaKnown RBP9.54□□□□□ -0.88
BBS4-214ENST00000568535 ZFPM1Q8IX07 1006 aa9.54□□□□□ -0.88
BBS4-214ENST00000568535 GPC2Q8N158 579 aa9.54□□□□□ -0.88
BBS4-214ENST00000568535 PHKBQ93100 1093 aa9.54□□□□□ -0.88
BBS4-214ENST00000568535 HOOK2Q96ED9 719 aa9.54□□□□□ -0.88
BBS4-214ENST00000568535 ZNF396Q96N95 335 aaPredicted RBP9.54□□□□□ -0.88
BBS4-214ENST00000568535 TMEM47Q9BQJ4 181 aa9.54□□□□□ -0.88
BBS4-214ENST00000568535 SCAND2PQ9GZW5 306 aaPredicted RBP9.54□□□□□ -0.88
BBS4-214ENST00000568535 KANSL2Q9H9L4 492 aa9.54□□□□□ -0.88
BBS4-214ENST00000568535 MTMR4Q9NYA4 1195 aa9.54□□□□□ -0.88
BBS4-214ENST00000568535 CNOT7Q9UIV1 285 aaKnown RBP9.54□□□□□ -0.88
BBS4-214ENST00000568535 PCDHAC2Q9Y5I4 1007 aa9.54□□□□□ -0.88
BBS4-214ENST00000568535 LAMB1P07942 1786 aa9.54□□□□□ -0.88
BBS4-214ENST00000568535 SCN9AQ15858 1988 aa9.54□□□□□ -0.88
BBS4-214ENST00000568535 COL4A5P29400 1685 aa9.53□□□□□ -0.88
BBS4-214ENST00000568535 DDTLA6NHG4 134 aaPredicted RBP9.53□□□□□ -0.88
BBS4-214ENST00000568535 WNT10BO00744 389 aa9.53□□□□□ -0.88
BBS4-214ENST00000568535 TBC1D12O60347 775 aa9.53□□□□□ -0.88
BBS4-214ENST00000568535 PRPF40AO75400 957 aaKnown RBP9.53□□□□□ -0.88
BBS4-214ENST00000568535 PARP1P09874 1014 aaKnown RBP9.53□□□□□ -0.88
BBS4-214ENST00000568535 SMARCA1P28370 1054 aa9.53□□□□□ -0.88
BBS4-214ENST00000568535 NOVP48745 357 aa9.53□□□□□ -0.88
BBS4-214ENST00000568535 GRM4Q14833 912 aa9.53□□□□□ -0.88
BBS4-214ENST00000568535 TMEM179Q6ZVK1 233 aa9.53□□□□□ -0.88
BBS4-214ENST00000568535 TMTC3Q6ZXV5 915 aa9.53□□□□□ -0.88
BBS4-214ENST00000568535 FERMT3Q86UX7 667 aa9.53□□□□□ -0.88
BBS4-214ENST00000568535 MICALL2Q8IY33 904 aa9.53□□□□□ -0.88
BBS4-214ENST00000568535 CEP95Q96GE4 821 aa9.53□□□□□ -0.88
BBS4-214ENST00000568535 ZBED3Q96IU2 234 aaPredicted RBP9.53□□□□□ -0.88
BBS4-214ENST00000568535 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.53□□□□□ -0.88
BBS4-214ENST00000568535 BRCA1P38398 1863 aaKnown RBP9.53□□□□□ -0.88
BBS4-214ENST00000568535 IGKV6D-41A0A0C4DH26 115 aa9.52□□□□□ -0.89
BBS4-214ENST00000568535 MBD3O95983 291 aa9.52□□□□□ -0.89
BBS4-214ENST00000568535 AKR1B1P15121 316 aa9.52□□□□□ -0.89
BBS4-214ENST00000568535 RESTQ13127 1097 aa9.52□□□□□ -0.89
BBS4-214ENST00000568535 ABCB5Q2M3G0 1257 aa9.52□□□□□ -0.89
BBS4-214ENST00000568535 FOXD4L6Q3SYB3 417 aaPredicted RBP9.52□□□□□ -0.89
BBS4-214ENST00000568535 FOXD4L3Q6VB84 417 aaPredicted RBP9.52□□□□□ -0.89
BBS4-214ENST00000568535 SH3BP5LQ7L8J4 393 aa9.52□□□□□ -0.89
BBS4-214ENST00000568535 NBPF11Q86T75 865 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms