RNA–Protein interactions for RNA: ENST00000568365.1

SIRPB1-213, Transcript of signal regulatory protein beta 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SIRPB1, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB1-213ENST00000568365 TRERF1Q96PN7 1200 aa10.67□□□□□ -0.7
SIRPB1-213ENST00000568365 DESI2Q9BSY9 194 aa10.67□□□□□ -0.7
SIRPB1-213ENST00000568365 PUS3Q9BZE2 481 aaKnown RBP10.67□□□□□ -0.7
SIRPB1-213ENST00000568365 FOXP1Q9H334 677 aaPredicted RBP10.67□□□□□ -0.7
SIRPB1-213ENST00000568365 MRPL44Q9H9J2 332 aaKnown RBP10.67□□□□□ -0.7
SIRPB1-213ENST00000568365 SPON1Q9HCB6 807 aa10.67□□□□□ -0.7
SIRPB1-213ENST00000568365 FBXO2Q9UK22 296 aaPredicted RBP10.67□□□□□ -0.7
SIRPB1-213ENST00000568365 ZNF831Q5JPB2 1677 aa10.67□□□□□ -0.7
SIRPB1-213ENST00000568365 ITIH6Q6UXX5 1313 aa10.67□□□□□ -0.7
SIRPB1-213ENST00000568365 FOXN1O15353 648 aa10.67□□□□□ -0.7
SIRPB1-213ENST00000568365 POLR2DO15514 142 aaKnown RBP10.67□□□□□ -0.7
SIRPB1-213ENST00000568365 MFAP3LO75121 409 aa10.67□□□□□ -0.7
SIRPB1-213ENST00000568365 PRR29P0C7W0 189 aa10.67□□□□□ -0.7
SIRPB1-213ENST00000568365 IFNAR1P17181 557 aa10.67□□□□□ -0.7
SIRPB1-213ENST00000568365 MCM3P25205 808 aa10.67□□□□□ -0.7
SIRPB1-213ENST00000568365 TNNT3P45378 269 aaPredicted RBP10.67□□□□□ -0.7
SIRPB1-213ENST00000568365 FMR1Q06787 632 aaKnown RBP eCLIP10.67□□□□□ -0.7
SIRPB1-213ENST00000568365 ITPK1Q13572 414 aa10.67□□□□□ -0.7
SIRPB1-213ENST00000568365 KIF4BQ2VIQ3 1234 aa10.67□□□□□ -0.7
SIRPB1-213ENST00000568365 HSP90B2PQ58FF3 399 aa10.67□□□□□ -0.7
SIRPB1-213ENST00000568365 TAF7LQ5H9L4 462 aa10.67□□□□□ -0.7
SIRPB1-213ENST00000568365 SRLQ86TD4 932 aa10.67□□□□□ -0.7
SIRPB1-213ENST00000568365 TRIM22Q8IYM9 498 aa10.67□□□□□ -0.7
SIRPB1-213ENST00000568365 STK11IPQ8N1F8 1099 aa10.67□□□□□ -0.7
SIRPB1-213ENST00000568365 IGSF22Q8N9C0 903 aa10.67□□□□□ -0.7
SIRPB1-213ENST00000568365 SPATA20Q8TB22 786 aa10.67□□□□□ -0.7
SIRPB1-213ENST00000568365 PHKBQ93100 1093 aa10.67□□□□□ -0.7
SIRPB1-213ENST00000568365 ZNF512BQ96KM6 892 aaPredicted RBP10.67□□□□□ -0.7
SIRPB1-213ENST00000568365 SLC26A6Q9BXS9 759 aa10.67□□□□□ -0.7
SIRPB1-213ENST00000568365 CNNM2Q9H8M5 875 aa10.67□□□□□ -0.7
SIRPB1-213ENST00000568365 ANKZF1Q9H8Y5 726 aa10.67□□□□□ -0.7
SIRPB1-213ENST00000568365 LY9Q9HBG7 655 aa10.67□□□□□ -0.7
SIRPB1-213ENST00000568365 VPS18Q9P253 973 aa10.67□□□□□ -0.7
SIRPB1-213ENST00000568365 MKRN1Q9UHC7 482 aaKnown RBP10.67□□□□□ -0.7
SIRPB1-213ENST00000568365 SRPRBQ9Y5M8 271 aaKnown RBP10.67□□□□□ -0.7
SIRPB1-213ENST00000568365 SYNRGQ9UMZ2 1314 aa10.66□□□□□ -0.7
SIRPB1-213ENST00000568365 CICQ96RK0 1608 aaPredicted RBP10.66□□□□□ -0.7
SIRPB1-213ENST00000568365 COL5A3P25940 1745 aaPredicted RBP10.66□□□□□ -0.7
SIRPB1-213ENST00000568365 CTAGE15A4D2H0 777 aa10.66□□□□□ -0.7
SIRPB1-213ENST00000568365 SOWAHDA6NJG2 315 aa10.66□□□□□ -0.7
SIRPB1-213ENST00000568365 RANBP6O60518 1105 aaKnown RBP10.66□□□□□ -0.7
SIRPB1-213ENST00000568365 CTAGE8P0CG41 777 aa10.66□□□□□ -0.7
SIRPB1-213ENST00000568365 FECHP22830 423 aa10.66□□□□□ -0.7
SIRPB1-213ENST00000568365 ADORA1P30542 326 aa10.66□□□□□ -0.7
SIRPB1-213ENST00000568365 ATP6V1AP38606 617 aa10.66□□□□□ -0.7
SIRPB1-213ENST00000568365 PBX1P40424 430 aa10.66□□□□□ -0.7
SIRPB1-213ENST00000568365 TRIM14Q14142 442 aa10.66□□□□□ -0.7
SIRPB1-213ENST00000568365 UBE3CQ15386 1083 aa10.66□□□□□ -0.7
SIRPB1-213ENST00000568365 ALX1Q15699 326 aa10.66□□□□□ -0.7
SIRPB1-213ENST00000568365 TMEM67Q5HYA8 995 aa10.66□□□□□ -0.7
SIRPB1-213ENST00000568365 CTAGE6Q86UF2 777 aa10.66□□□□□ -0.7
SIRPB1-213ENST00000568365 TMTC1Q8IUR5 882 aa10.66□□□□□ -0.7
SIRPB1-213ENST00000568365 TBC1D10CQ8IV04 446 aa10.66□□□□□ -0.7
SIRPB1-213ENST00000568365 CTAGE4Q8IX94 777 aa10.66□□□□□ -0.7
SIRPB1-213ENST00000568365 IGDCC4Q8TDY8 1250 aa10.66□□□□□ -0.7
SIRPB1-213ENST00000568365 NAPGQ99747 312 aaPredicted RBP10.66□□□□□ -0.7
SIRPB1-213ENST00000568365 NBPF3Q9H094 633 aa10.66□□□□□ -0.7
SIRPB1-213ENST00000568365 PDE11AQ9HCR9 933 aa10.66□□□□□ -0.7
SIRPB1-213ENST00000568365 LZTFL1Q9NQ48 299 aa10.66□□□□□ -0.7
SIRPB1-213ENST00000568365 WWC3Q9ULE0 1092 aa10.66□□□□□ -0.7
SIRPB1-213ENST00000568365 RRP15Q9Y3B9 282 aaKnown RBP10.66□□□□□ -0.7
SIRPB1-213ENST00000568365 SLC12A7Q9Y666 1083 aa10.66□□□□□ -0.7
SIRPB1-213ENST00000568365 NBPF26B4DH59 902 aa10.65□□□□□ -0.7
SIRPB1-213ENST00000568365 B4E1Z4 1266 aa10.65□□□□□ -0.7
SIRPB1-213ENST00000568365 ACTN4O43707 911 aaKnown RBP10.65□□□□□ -0.7
SIRPB1-213ENST00000568365 PTPN21Q16825 1174 aa10.65□□□□□ -0.7
SIRPB1-213ENST00000568365 ZNF827Q17R98 1081 aa10.65□□□□□ -0.7
SIRPB1-213ENST00000568365 HSP90AA4PQ58FG1 418 aa10.65□□□□□ -0.7
SIRPB1-213ENST00000568365 ZNF569Q5MCW4 686 aa10.65□□□□□ -0.7
SIRPB1-213ENST00000568365 NBPF10Q6P3W6 841 aaKnown RBP10.65□□□□□ -0.7
SIRPB1-213ENST00000568365 RAD9BQ6WBX8 426 aa10.65□□□□□ -0.7
SIRPB1-213ENST00000568365 TTLL7Q6ZT98 887 aa10.65□□□□□ -0.7
SIRPB1-213ENST00000568365 DIS3L2Q8IYB7 885 aaKnown RBP10.65□□□□□ -0.7
SIRPB1-213ENST00000568365 TRMT44Q8IYL2 757 aaKnown RBP10.65□□□□□ -0.7
SIRPB1-213ENST00000568365 NBPF15Q8N660 670 aa10.65□□□□□ -0.7
SIRPB1-213ENST00000568365 LINC00116Q8NCU8 138 aa10.65□□□□□ -0.7
SIRPB1-213ENST00000568365 MTA3Q9BTC8 594 aa10.65□□□□□ -0.7
SIRPB1-213ENST00000568365 PLA2G12BQ9BX93 195 aa10.65□□□□□ -0.7
SIRPB1-213ENST00000568365 TEX13AQ9BXU3 409 aaPredicted RBP10.65□□□□□ -0.7
SIRPB1-213ENST00000568365 MED4Q9NPJ6 270 aa10.65□□□□□ -0.7
SIRPB1-213ENST00000568365 SAMSN1Q9NSI8 373 aaKnown RBP10.65□□□□□ -0.7
SIRPB1-213ENST00000568365 PUF60Q9UHX1 559 aaKnown RBP10.65□□□□□ -0.7
SIRPB1-213ENST00000568365 L1RE1Q9UN81 338 aa10.65□□□□□ -0.7
SIRPB1-213ENST00000568365 CCDC196A0A1B0GTZ2 297 aa10.64□□□□□ -0.71
SIRPB1-213ENST00000568365 VGLL3A8MV65 326 aa10.64□□□□□ -0.71
SIRPB1-213ENST00000568365 DEXIO95424 95 aa10.64□□□□□ -0.71
SIRPB1-213ENST00000568365 BMP15O95972 392 aa10.64□□□□□ -0.71
SIRPB1-213ENST00000568365 APPP05067 770 aa10.64□□□□□ -0.71
SIRPB1-213ENST00000568365 RCAN1P53805 252 aa10.64□□□□□ -0.71
SIRPB1-213ENST00000568365 RBL2Q08999 1139 aa10.64□□□□□ -0.71
SIRPB1-213ENST00000568365 SCARF1Q14162 830 aa10.64□□□□□ -0.71
SIRPB1-213ENST00000568365 MCM6Q14566 821 aa10.64□□□□□ -0.71
SIRPB1-213ENST00000568365 MTF1Q14872 753 aa10.64□□□□□ -0.71
SIRPB1-213ENST00000568365 MAP9Q49MG5 647 aa10.64□□□□□ -0.71
SIRPB1-213ENST00000568365 HSP90AB3PQ58FF7 597 aa10.64□□□□□ -0.71
SIRPB1-213ENST00000568365 SLC9C2Q5TAH2 1124 aa10.64□□□□□ -0.71
SIRPB1-213ENST00000568365 CTCFLQ8NI51 663 aaPredicted RBP10.64□□□□□ -0.71
SIRPB1-213ENST00000568365 KRT23Q9C075 422 aa10.64□□□□□ -0.71
SIRPB1-213ENST00000568365 FAM217BQ9NTX9 383 aaPredicted RBP10.64□□□□□ -0.71
SIRPB1-213ENST00000568365 AATFQ9NY61 560 aaKnown RBP eCLIP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms