RNA–Protein interactions for RNA: ENST00000568340.5

CDH11-214, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 514 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-214ENST00000568340 TMEM47Q9BQJ4 181 aa12.14□□□□□ -0.47
CDH11-214ENST00000568340 UBAC1Q9BSL1 405 aa12.14□□□□□ -0.47
CDH11-214ENST00000568340 MYL10Q9BUA6 226 aa12.14□□□□□ -0.47
CDH11-214ENST00000568340 GPBP1L1Q9HC44 474 aaPredicted RBP12.14□□□□□ -0.47
CDH11-214ENST00000568340 NCOA5Q9HCD5 579 aaKnown RBP12.14□□□□□ -0.47
CDH11-214ENST00000568340 TOMM22Q9NS69 142 aa12.14□□□□□ -0.47
CDH11-214ENST00000568340 DOCK1Q14185 1865 aa12.14□□□□□ -0.47
CDH11-214ENST00000568340 ADM5C9JUS6 153 aa12.13□□□□□ -0.47
CDH11-214ENST00000568340 JAK2O60674 1132 aa12.13□□□□□ -0.47
CDH11-214ENST00000568340 DTNBO60941 627 aa12.13□□□□□ -0.47
CDH11-214ENST00000568340 FDPSP14324 419 aaKnown RBP12.13□□□□□ -0.47
CDH11-214ENST00000568340 RXRAP19793 462 aa12.13□□□□□ -0.47
CDH11-214ENST00000568340 ZNF444Q8N0Y2 327 aaPredicted RBP12.13□□□□□ -0.47
CDH11-214ENST00000568340 TMTC2Q8N394 836 aa12.13□□□□□ -0.47
CDH11-214ENST00000568340 MAP3K14Q99558 947 aa12.13□□□□□ -0.47
CDH11-214ENST00000568340 ZBTB21Q9ULJ3 1066 aa12.13□□□□□ -0.47
CDH11-214ENST00000568340 ATAD5Q96QE3 1844 aa12.13□□□□□ -0.47
CDH11-214ENST00000568340 PHIPQ8WWQ0 1821 aa12.12□□□□□ -0.47
CDH11-214ENST00000568340 IQCA1LA6NCM1 817 aa12.12□□□□□ -0.47
CDH11-214ENST00000568340 ZBTB43O43298 467 aa12.12□□□□□ -0.47
CDH11-214ENST00000568340 GDF11O95390 407 aa12.12□□□□□ -0.47
CDH11-214ENST00000568340 CAP2P40123 477 aa12.12□□□□□ -0.47
CDH11-214ENST00000568340 GRM4Q14833 912 aa12.12□□□□□ -0.47
CDH11-214ENST00000568340 SEPT2Q15019 361 aa12.12□□□□□ -0.47
CDH11-214ENST00000568340 SART3Q15020 963 aaKnown RBP12.12□□□□□ -0.47
CDH11-214ENST00000568340 CERKLQ49MI3 558 aaPredicted RBP12.12□□□□□ -0.47
CDH11-214ENST00000568340 CCDC178Q5BJE1 867 aa12.12□□□□□ -0.47
CDH11-214ENST00000568340 IFIT1BQ5T764 474 aaKnown RBP12.12□□□□□ -0.47
CDH11-214ENST00000568340 PRAMEF18Q5VWM3 479 aa12.12□□□□□ -0.47
CDH11-214ENST00000568340 TMEM179Q6ZVK1 233 aa12.12□□□□□ -0.47
CDH11-214ENST00000568340 NBPF11Q86T75 865 aa12.12□□□□□ -0.47
CDH11-214ENST00000568340 MICU3Q86XE3 530 aa12.12□□□□□ -0.47
CDH11-214ENST00000568340 CRACR2BQ8N4Y2 399 aaPredicted RBP12.12□□□□□ -0.47
CDH11-214ENST00000568340 MKL1Q969V6 931 aa12.12□□□□□ -0.47
CDH11-214ENST00000568340 LLPHQ9BRT6 129 aaKnown RBP12.12□□□□□ -0.47
CDH11-214ENST00000568340 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.12□□□□□ -0.47
CDH11-214ENST00000568340 NYAP2Q9P242 653 aa12.12□□□□□ -0.47
CDH11-214ENST00000568340 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.12□□□□□ -0.47
CDH11-214ENST00000568340 A0A1W2PRG0 241 aa12.11□□□□□ -0.47
CDH11-214ENST00000568340 GH2P01242 217 aa12.11□□□□□ -0.47
CDH11-214ENST00000568340 TOP1P11387 765 aaKnown RBP12.11□□□□□ -0.47
CDH11-214ENST00000568340 ADD1P35611 737 aaKnown RBP12.11□□□□□ -0.47
CDH11-214ENST00000568340 STK3Q13188 491 aa12.11□□□□□ -0.47
CDH11-214ENST00000568340 PKP1Q13835 747 aa12.11□□□□□ -0.47
CDH11-214ENST00000568340 NOL9Q5SY16 702 aaKnown RBP12.11□□□□□ -0.47
CDH11-214ENST00000568340 MIGA2Q7L4E1 593 aa12.11□□□□□ -0.47
CDH11-214ENST00000568340 PNMA1Q8ND90 353 aa12.11□□□□□ -0.47
CDH11-214ENST00000568340 SHISA4Q96DD7 197 aa12.11□□□□□ -0.47
CDH11-214ENST00000568340 SLKQ9H2G2 1235 aaPredicted RBP12.11□□□□□ -0.47
CDH11-214ENST00000568340 FOXD4L1Q9NU39 408 aa12.11□□□□□ -0.47
CDH11-214ENST00000568340 CIZ1Q9ULV3 898 aaPredicted RBP12.11□□□□□ -0.47
CDH11-214ENST00000568340 SYNPO2Q9UMS6 1093 aa12.11□□□□□ -0.47
CDH11-214ENST00000568340 ZDHHC9Q9Y397 364 aa12.11□□□□□ -0.47
CDH11-214ENST00000568340 SLC12A7Q9Y666 1083 aa12.11□□□□□ -0.47
CDH11-214ENST00000568340 CNTNAP5Q8WYK1 1306 aa12.11□□□□□ -0.47
CDH11-214ENST00000568340 STK36Q9NRP7 1315 aa12.11□□□□□ -0.47
CDH11-214ENST00000568340 PTPDC1A2A3K4 754 aa12.1□□□□□ -0.47
CDH11-214ENST00000568340 PALM3A6NDB9 673 aaPredicted RBP12.1□□□□□ -0.47
CDH11-214ENST00000568340 CCDC69A6NI79 296 aa12.1□□□□□ -0.47
CDH11-214ENST00000568340 GOLGA8AA7E2F4 631 aa12.1□□□□□ -0.47
CDH11-214ENST00000568340 UBE2Q2LH0YL09 131 aa12.1□□□□□ -0.47
CDH11-214ENST00000568340 PLEKHA8P1O95397 391 aa12.1□□□□□ -0.47
CDH11-214ENST00000568340 TTLL1O95922 423 aa12.1□□□□□ -0.47
CDH11-214ENST00000568340 PDHBP11177 359 aa12.1□□□□□ -0.47
CDH11-214ENST00000568340 IFNAR1P17181 557 aa12.1□□□□□ -0.47
CDH11-214ENST00000568340 METAP2P50579 478 aaKnown RBP eCLIP12.1□□□□□ -0.47
CDH11-214ENST00000568340 CCT2P78371 535 aaKnown RBP12.1□□□□□ -0.47
CDH11-214ENST00000568340 RTN1Q16799 776 aa12.1□□□□□ -0.47
CDH11-214ENST00000568340 ABCB5Q2M3G0 1257 aa12.1□□□□□ -0.47
CDH11-214ENST00000568340 TMTC3Q6ZXV5 915 aa12.1□□□□□ -0.47
CDH11-214ENST00000568340 LRRC47Q8N1G4 583 aaKnown RBP12.1□□□□□ -0.47
CDH11-214ENST00000568340 FANCBQ8NB91 859 aa12.1□□□□□ -0.47
CDH11-214ENST00000568340 SPRYD3Q8NCJ5 442 aa12.1□□□□□ -0.47
CDH11-214ENST00000568340 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.1□□□□□ -0.47
CDH11-214ENST00000568340 KLRG1Q96E93 195 aa12.1□□□□□ -0.47
CDH11-214ENST00000568340 MAD2L2Q9UI95 211 aa12.1□□□□□ -0.47
CDH11-214ENST00000568340 POLR2AP24928 1970 aaKnown RBP12.1□□□□□ -0.47
CDH11-214ENST00000568340 ERICH2A1L162 156 aa12.09□□□□□ -0.47
CDH11-214ENST00000568340 KIF3CO14782 793 aa12.09□□□□□ -0.47
CDH11-214ENST00000568340 CYTH3O43739 400 aa12.09□□□□□ -0.47
CDH11-214ENST00000568340 EEF2P13639 858 aaKnown RBP12.09□□□□□ -0.47
CDH11-214ENST00000568340 INPP5BP32019 993 aa12.09□□□□□ -0.47
CDH11-214ENST00000568340 FGD1P98174 961 aa12.09□□□□□ -0.47
CDH11-214ENST00000568340 ICA1Q05084 483 aa12.09□□□□□ -0.47
CDH11-214ENST00000568340 MAP3K11Q16584 847 aa12.09□□□□□ -0.47
CDH11-214ENST00000568340 KIAA1755Q5JYT7 1200 aa12.09□□□□□ -0.47
CDH11-214ENST00000568340 KRT26Q7Z3Y9 468 aa12.09□□□□□ -0.47
CDH11-214ENST00000568340 PNMA8AQ86V59 439 aaPredicted RBP12.09□□□□□ -0.47
CDH11-214ENST00000568340 GMCL1P1Q8NEA9 526 aa12.09□□□□□ -0.47
CDH11-214ENST00000568340 CDCA5Q96FF9 252 aa12.09□□□□□ -0.47
CDH11-214ENST00000568340 ZNF341Q9BYN7 854 aa12.09□□□□□ -0.47
CDH11-214ENST00000568340 GLIS2Q9BZE0 524 aaPredicted RBP12.09□□□□□ -0.47
CDH11-214ENST00000568340 KANSL2Q9H9L4 492 aa12.09□□□□□ -0.47
CDH11-214ENST00000568340 NMRK2Q9NPI5 230 aa12.09□□□□□ -0.47
CDH11-214ENST00000568340 GINM1Q9NU53 330 aa12.09□□□□□ -0.47
CDH11-214ENST00000568340 STX8Q9UNK0 236 aa12.09□□□□□ -0.47
CDH11-214ENST00000568340 FZD1Q9UP38 647 aa12.09□□□□□ -0.47
CDH11-214ENST00000568340 MYH4Q9Y623 1939 aa12.09□□□□□ -0.47
CDH11-214ENST00000568340 CTNND1O60716 968 aaKnown RBP12.08□□□□□ -0.48
CDH11-214ENST00000568340 USP2O75604 605 aaPredicted RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms