RNA–Protein interactions for RNA: ENST00000568238.1

TSC2-220, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 422 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-220ENST00000568238 GJA8P48165 433 aa15.52■□□□□ 0.08
TSC2-220ENST00000568238 USP14P54578 494 aa15.52■□□□□ 0.08
TSC2-220ENST00000568238 SLFNL1Q499Z3 407 aa15.52■□□□□ 0.08
TSC2-220ENST00000568238 GCC1Q96CN9 775 aa15.52■□□□□ 0.08
TSC2-220ENST00000568238 GPATCH3Q96I76 525 aa15.52■□□□□ 0.08
TSC2-220ENST00000568238 UNC93B1Q9H1C4 597 aa15.52■□□□□ 0.08
TSC2-220ENST00000568238 ECHDC1Q9NTX5 307 aa15.52■□□□□ 0.08
TSC2-220ENST00000568238 CYP2D6P10635 497 aa15.51■□□□□ 0.07
TSC2-220ENST00000568238 EVX2Q03828 476 aa15.51■□□□□ 0.07
TSC2-220ENST00000568238 UBE3CQ15386 1083 aa15.51■□□□□ 0.07
TSC2-220ENST00000568238 ANKRD45Q5TZF3 282 aa15.51■□□□□ 0.07
TSC2-220ENST00000568238 B4GALNT3Q6L9W6 998 aa15.51■□□□□ 0.07
TSC2-220ENST00000568238 ZSCAN25Q6NSZ9 544 aa15.51■□□□□ 0.07
TSC2-220ENST00000568238 GPRC5AQ8NFJ5 357 aa15.51■□□□□ 0.07
TSC2-220ENST00000568238 KIAA1683Q9H0B3 1180 aa15.51■□□□□ 0.07
TSC2-220ENST00000568238 TXNRD2Q9NNW7 524 aa15.51■□□□□ 0.07
TSC2-220ENST00000568238 ATP8A2Q9NTI2 1148 aa15.51■□□□□ 0.07
TSC2-220ENST00000568238 RANBP2P49792 3224 aaKnown RBP15.51■□□□□ 0.07
TSC2-220ENST00000568238 MPHOSPH10O00566 681 aaKnown RBP15.5■□□□□ 0.07
TSC2-220ENST00000568238 PRKAB2O43741 272 aa15.5■□□□□ 0.07
TSC2-220ENST00000568238 VCAM1P19320 739 aa15.5■□□□□ 0.07
TSC2-220ENST00000568238 ERVK-9P63128 1117 aa15.5■□□□□ 0.07
TSC2-220ENST00000568238 ERVK-24P63145 666 aa15.5■□□□□ 0.07
TSC2-220ENST00000568238 AMOTL1Q8IY63 956 aa15.5■□□□□ 0.07
TSC2-220ENST00000568238 SLC44A5Q8NCS7 719 aa15.5■□□□□ 0.07
TSC2-220ENST00000568238 ACER1Q8TDN7 264 aa15.5■□□□□ 0.07
TSC2-220ENST00000568238 U2AF1L4Q8WU68 220 aaKnown RBP15.5■□□□□ 0.07
TSC2-220ENST00000568238 DDRGK1Q96HY6 314 aa15.5■□□□□ 0.07
TSC2-220ENST00000568238 PAGR1Q9BTK6 254 aa15.5■□□□□ 0.07
TSC2-220ENST00000568238 ZBTB47Q9UFB7 747 aaPredicted RBP15.5■□□□□ 0.07
TSC2-220ENST00000568238 SWAP70Q9UH65 585 aa15.5■□□□□ 0.07
TSC2-220ENST00000568238 A0A0G2JMZ2 1700 aa15.49■□□□□ 0.07
TSC2-220ENST00000568238 USP17L15C9J2P7 530 aa15.49■□□□□ 0.07
TSC2-220ENST00000568238 USP17L13C9JLJ4 530 aa15.49■□□□□ 0.07
TSC2-220ENST00000568238 USP17L11C9JVI0 530 aa15.49■□□□□ 0.07
TSC2-220ENST00000568238 USP17L18D6R9N7 530 aa15.49■□□□□ 0.07
TSC2-220ENST00000568238 USP17L22D6RA61 530 aa15.49■□□□□ 0.07
TSC2-220ENST00000568238 USP17L17D6RBQ6 530 aa15.49■□□□□ 0.07
TSC2-220ENST00000568238 USP17L19D6RCP7 530 aa15.49■□□□□ 0.07
TSC2-220ENST00000568238 USP17L20D6RJB6 530 aa15.49■□□□□ 0.07
TSC2-220ENST00000568238 PEX10O60683 326 aa15.49■□□□□ 0.07
TSC2-220ENST00000568238 HMGCRP04035 888 aa15.49■□□□□ 0.07
TSC2-220ENST00000568238 CHGBP05060 677 aa15.49■□□□□ 0.07
TSC2-220ENST00000568238 MAPK4P31152 587 aa15.49■□□□□ 0.07
TSC2-220ENST00000568238 GUCY1A2P33402 732 aa15.49■□□□□ 0.07
TSC2-220ENST00000568238 USP17L24Q0WX57 530 aa15.49■□□□□ 0.07
TSC2-220ENST00000568238 SEPT2Q15019 361 aa15.49■□□□□ 0.07
TSC2-220ENST00000568238 SMC5Q8IY18 1101 aa15.49■□□□□ 0.07
TSC2-220ENST00000568238 SOCS4Q8WXH5 440 aa15.49■□□□□ 0.07
TSC2-220ENST00000568238 RBPJLQ9UBG7 517 aa15.49■□□□□ 0.07
TSC2-220ENST00000568238 GJD2Q9UKL4 321 aa15.49■□□□□ 0.07
TSC2-220ENST00000568238 PARP14Q460N5 1801 aa15.48■□□□□ 0.07
TSC2-220ENST00000568238 TSHZ3Q63HK5 1081 aa15.48■□□□□ 0.07
TSC2-220ENST00000568238 TMEM179Q6ZVK1 233 aa15.48■□□□□ 0.07
TSC2-220ENST00000568238 CCAR1Q8IX12 1150 aaKnown RBP15.48■□□□□ 0.07
TSC2-220ENST00000568238 DYNLL2Q96FJ2 89 aa15.48■□□□□ 0.07
TSC2-220ENST00000568238 RPAP3Q9H6T3 665 aaPredicted RBP15.48■□□□□ 0.07
TSC2-220ENST00000568238 PAK6Q9NQU5 681 aaPredicted RBP15.48■□□□□ 0.07
TSC2-220ENST00000568238 SLC4A4Q9Y6R1 1079 aa15.48■□□□□ 0.07
TSC2-220ENST00000568238 FARP2O94887 1054 aaPredicted RBP15.47■□□□□ 0.07
TSC2-220ENST00000568238 SGPL1O95470 568 aa15.47■□□□□ 0.07
TSC2-220ENST00000568238 CATSPERGQ6ZRH7 1159 aa15.47■□□□□ 0.07
TSC2-220ENST00000568238 UBE2Q1Q7Z7E8 422 aa15.47■□□□□ 0.07
TSC2-220ENST00000568238 KBTBD3Q8NAB2 608 aa15.47■□□□□ 0.07
TSC2-220ENST00000568238 DEFB118Q96PH6 123 aa15.47■□□□□ 0.07
TSC2-220ENST00000568238 NUDT12Q9BQG2 462 aa15.47■□□□□ 0.07
TSC2-220ENST00000568238 LNPKQ9C0E8 428 aa15.47■□□□□ 0.07
TSC2-220ENST00000568238 PUS7LQ9H0K6 701 aaKnown RBP15.47■□□□□ 0.07
TSC2-220ENST00000568238 CWC22Q9HCG8 908 aaKnown RBP15.47■□□□□ 0.07
TSC2-220ENST00000568238 RABGAP1Q9Y3P9 1069 aa15.47■□□□□ 0.07
TSC2-220ENST00000568238 RLFQ13129 1914 aa15.47■□□□□ 0.07
TSC2-220ENST00000568238 DNAH12Q6ZR08 3092 aa15.46■□□□□ 0.07
TSC2-220ENST00000568238 CYP2D7A0A087X1C5 515 aa15.46■□□□□ 0.07
TSC2-220ENST00000568238 CAPN2P17655 700 aa15.46■□□□□ 0.07
TSC2-220ENST00000568238 CYP2B6P20813 491 aa15.46■□□□□ 0.07
TSC2-220ENST00000568238 CCNA1P78396 465 aa15.46■□□□□ 0.07
TSC2-220ENST00000568238 NUCB1Q02818 461 aa15.46■□□□□ 0.07
TSC2-220ENST00000568238 Q3C1V9 767 aa15.46■□□□□ 0.07
TSC2-220ENST00000568238 C12orf60Q5U649 245 aa15.46■□□□□ 0.07
TSC2-220ENST00000568238 POTEEQ6S8J3 1075 aa15.46■□□□□ 0.07
TSC2-220ENST00000568238 LBX2Q6XYB7 198 aa15.46■□□□□ 0.07
TSC2-220ENST00000568238 GPR142Q7Z601 462 aa15.46■□□□□ 0.07
TSC2-220ENST00000568238 OTUD7AQ8TE49 926 aaPredicted RBP15.46■□□□□ 0.07
TSC2-220ENST00000568238 TRIB2Q92519 343 aa15.46■□□□□ 0.07
TSC2-220ENST00000568238 CCDC136Q96JN2 1154 aa15.46■□□□□ 0.07
TSC2-220ENST00000568238 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.46■□□□□ 0.07
TSC2-220ENST00000568238 PORCNQ9H237 461 aa15.46■□□□□ 0.07
TSC2-220ENST00000568238 GREB1LQ9C091 1923 aaPredicted RBP15.46■□□□□ 0.07
TSC2-220ENST00000568238 A0A1W2PRG0 241 aa15.45■□□□□ 0.06
TSC2-220ENST00000568238 SPDYE16A6NNV3 312 aaPredicted RBP15.45■□□□□ 0.06
TSC2-220ENST00000568238 USP17L12C9JPN9 530 aa15.45■□□□□ 0.06
TSC2-220ENST00000568238 USP17L21D6R901 530 aa15.45■□□□□ 0.06
TSC2-220ENST00000568238 CNMDO75829 334 aa15.45■□□□□ 0.06
TSC2-220ENST00000568238 TFRCP02786 760 aaKnown RBP15.45■□□□□ 0.06
TSC2-220ENST00000568238 XRCC5P13010 732 aaKnown RBP15.45■□□□□ 0.06
TSC2-220ENST00000568238 AKR1B1P15121 316 aa15.45■□□□□ 0.06
TSC2-220ENST00000568238 ICA1Q05084 483 aa15.45■□□□□ 0.06
TSC2-220ENST00000568238 C16orf86Q6ZW13 317 aa15.45■□□□□ 0.06
TSC2-220ENST00000568238 HTATIP2Q9BUP3 242 aa15.45■□□□□ 0.06
TSC2-220ENST00000568238 TANGO6Q9C0B7 1094 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms