RNA–Protein interactions for RNA: ENST00000566682.1

SPG7-215, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 756 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-215ENST00000566682 ROBO3Q96MS0 1386 aa16.32■□□□□ 0.2
SPG7-215ENST00000566682 CFHR5Q9BXR6 569 aa16.32■□□□□ 0.2
SPG7-215ENST00000566682 R3HDMLQ9H3Y0 253 aa16.32■□□□□ 0.2
SPG7-215ENST00000566682 AKR1B1P15121 316 aa16.31■□□□□ 0.2
SPG7-215ENST00000566682 BACE1P56817 501 aa16.31■□□□□ 0.2
SPG7-215ENST00000566682 SEPT2Q15019 361 aa16.31■□□□□ 0.2
SPG7-215ENST00000566682 GPAT2Q6NUI2 795 aa16.31■□□□□ 0.2
SPG7-215ENST00000566682 GADL1Q6ZQY3 521 aa16.31■□□□□ 0.2
SPG7-215ENST00000566682 ANKRD23Q86SG2 305 aa16.31■□□□□ 0.2
SPG7-215ENST00000566682 IL25Q9H293 177 aa16.31■□□□□ 0.2
SPG7-215ENST00000566682 MKNK2Q9HBH9 465 aa16.31■□□□□ 0.2
SPG7-215ENST00000566682 ZCCHC17Q9NP64 241 aaKnown RBP16.31■□□□□ 0.2
SPG7-215ENST00000566682 PRDM10Q9NQV6 1147 aa16.31■□□□□ 0.2
SPG7-215ENST00000566682 USP17L10C9JJH3 530 aa16.3■□□□□ 0.2
SPG7-215ENST00000566682 PDHXO00330 501 aa16.3■□□□□ 0.2
SPG7-215ENST00000566682 GABBR2O75899 941 aa16.3■□□□□ 0.2
SPG7-215ENST00000566682 RASA1P20936 1047 aa16.3■□□□□ 0.2
SPG7-215ENST00000566682 HMGCS2P54868 508 aa16.3■□□□□ 0.2
SPG7-215ENST00000566682 CRHR2Q13324 411 aa16.3■□□□□ 0.2
SPG7-215ENST00000566682 DGKZQ13574 1117 aa16.3■□□□□ 0.2
SPG7-215ENST00000566682 MTMR2Q13614 643 aa16.3■□□□□ 0.2
SPG7-215ENST00000566682 TAF1CQ15572 869 aaPredicted RBP16.3■□□□□ 0.2
SPG7-215ENST00000566682 BMP2KLQ5H9B9 411 aa16.3■□□□□ 0.2
SPG7-215ENST00000566682 SH3D19Q5HYK7 790 aa16.3■□□□□ 0.2
SPG7-215ENST00000566682 TMEM179Q6ZVK1 233 aa16.3■□□□□ 0.2
SPG7-215ENST00000566682 RUFY2Q8WXA3 655 aa16.3■□□□□ 0.2
SPG7-215ENST00000566682 LOC285556D6RIA3 1793 aa16.29■□□□□ 0.2
SPG7-215ENST00000566682 ZMYM6O95789 1325 aa16.29■□□□□ 0.2
SPG7-215ENST00000566682 C19orf81C9J6K1 198 aa16.29■□□□□ 0.2
SPG7-215ENST00000566682 GPR25O00155 361 aa16.29■□□□□ 0.2
SPG7-215ENST00000566682 SLC3A2P08195 630 aaKnown RBP16.29■□□□□ 0.2
SPG7-215ENST00000566682 CTDSPL2Q05D32 466 aa16.29■□□□□ 0.2
SPG7-215ENST00000566682 PDE4BQ07343 736 aa16.29■□□□□ 0.2
SPG7-215ENST00000566682 ZNF444Q8N0Y2 327 aaPredicted RBP16.29■□□□□ 0.2
SPG7-215ENST00000566682 PROCA1Q8NCQ7 364 aaPredicted RBP16.29■□□□□ 0.2
SPG7-215ENST00000566682 ZNF287Q9HBT7 754 aa16.29■□□□□ 0.2
SPG7-215ENST00000566682 ZFYVE28Q9HCC9 887 aa16.29■□□□□ 0.2
SPG7-215ENST00000566682 ANAPC4Q9UJX5 808 aa16.29■□□□□ 0.2
SPG7-215ENST00000566682 FARP1Q9Y4F1 1045 aaPredicted RBP16.29■□□□□ 0.2
SPG7-215ENST00000566682 RAD50Q92878 1312 aa16.28■□□□□ 0.2
SPG7-215ENST00000566682 GREB1LQ9C091 1923 aaPredicted RBP16.28■□□□□ 0.2
SPG7-215ENST00000566682 PRDM1O75626 825 aa16.28■□□□□ 0.2
SPG7-215ENST00000566682 TREML2Q5T2D2 321 aa16.28■□□□□ 0.2
SPG7-215ENST00000566682 ACER1Q8TDN7 264 aa16.28■□□□□ 0.2
SPG7-215ENST00000566682 DSCC1Q9BVC3 393 aa16.28■□□□□ 0.2
SPG7-215ENST00000566682 INCENPQ9NQS7 918 aa16.28■□□□□ 0.2
SPG7-215ENST00000566682 AGTPBP1Q9UPW5 1226 aa16.28■□□□□ 0.2
SPG7-215ENST00000566682 NOM1Q5C9Z4 860 aaKnown RBP16.27■□□□□ 0.2
SPG7-215ENST00000566682 CLEC10AQ8IUN9 316 aa16.27■□□□□ 0.2
SPG7-215ENST00000566682 SIAH1Q8IUQ4 282 aa16.27■□□□□ 0.2
SPG7-215ENST00000566682 ZNF296Q8WUU4 475 aaPredicted RBP16.27■□□□□ 0.2
SPG7-215ENST00000566682 FEZ1Q99689 392 aa16.27■□□□□ 0.2
SPG7-215ENST00000566682 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.27■□□□□ 0.2
SPG7-215ENST00000566682 EMILIN3Q9NT22 766 aa16.27■□□□□ 0.2
SPG7-215ENST00000566682 TMOD4Q9NZQ9 345 aa16.27■□□□□ 0.2
SPG7-215ENST00000566682 TACC3Q9Y6A5 838 aa16.27■□□□□ 0.2
SPG7-215ENST00000566682 A0A1W2PRG0 241 aa16.26■□□□□ 0.19
SPG7-215ENST00000566682 SGSM2O43147 1006 aa16.26■□□□□ 0.19
SPG7-215ENST00000566682 TLR2O60603 784 aa16.26■□□□□ 0.19
SPG7-215ENST00000566682 HAND2P61296 217 aa16.26■□□□□ 0.19
SPG7-215ENST00000566682 ZYXQ15942 572 aaKnown RBP16.26■□□□□ 0.19
SPG7-215ENST00000566682 COL13A1Q5TAT6 717 aaPredicted RBP16.26■□□□□ 0.19
SPG7-215ENST00000566682 USP17L2Q6R6M4 530 aa16.26■□□□□ 0.19
SPG7-215ENST00000566682 KIAA1683Q9H0B3 1180 aa16.26■□□□□ 0.19
SPG7-215ENST00000566682 KANSL2Q9H9L4 492 aa16.26■□□□□ 0.19
SPG7-215ENST00000566682 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.26■□□□□ 0.19
SPG7-215ENST00000566682 SLC45A1Q9Y2W3 748 aa16.26■□□□□ 0.19
SPG7-215ENST00000566682 LAMA4Q16363 1823 aa16.25■□□□□ 0.19
SPG7-215ENST00000566682 FGRP09769 529 aa16.25■□□□□ 0.19
SPG7-215ENST00000566682 CYP2C8P10632 490 aa16.25■□□□□ 0.19
SPG7-215ENST00000566682 USP14P54578 494 aa16.25■□□□□ 0.19
SPG7-215ENST00000566682 ICA1Q05084 483 aa16.25■□□□□ 0.19
SPG7-215ENST00000566682 ARHGEF10LQ9HCE6 1279 aa16.25■□□□□ 0.19
SPG7-215ENST00000566682 MYH4Q9Y623 1939 aa16.24■□□□□ 0.19
SPG7-215ENST00000566682 ZNF213O14771 459 aa16.24■□□□□ 0.19
SPG7-215ENST00000566682 FKTNO75072 461 aa16.24■□□□□ 0.19
SPG7-215ENST00000566682 TSPY3P0CV98 308 aa16.24■□□□□ 0.19
SPG7-215ENST00000566682 TSPY8P0CW00 308 aa16.24■□□□□ 0.19
SPG7-215ENST00000566682 EEF2P13639 858 aaKnown RBP16.24■□□□□ 0.19
SPG7-215ENST00000566682 TFAP4Q01664 338 aa16.24■□□□□ 0.19
SPG7-215ENST00000566682 PTH1RQ03431 593 aa16.24■□□□□ 0.19
SPG7-215ENST00000566682 PABPC4Q13310 644 aaKnown RBP eCLIP16.24■□□□□ 0.19
SPG7-215ENST00000566682 FAM47AQ5JRC9 791 aa16.24■□□□□ 0.19
SPG7-215ENST00000566682 C12orf42Q96LP6 360 aa16.24■□□□□ 0.19
SPG7-215ENST00000566682 PARK7Q99497 189 aaKnown RBP16.24■□□□□ 0.19
SPG7-215ENST00000566682 NBPF3Q9H094 633 aa16.24■□□□□ 0.19
SPG7-215ENST00000566682 TMX2Q9Y320 296 aa16.24■□□□□ 0.19
SPG7-215ENST00000566682 IGKV6D-41A0A0C4DH26 115 aa16.23■□□□□ 0.19
SPG7-215ENST00000566682 SPDYE4A6NLX3 237 aa16.23■□□□□ 0.19
SPG7-215ENST00000566682 ORC4O43929 436 aa16.23■□□□□ 0.19
SPG7-215ENST00000566682 CD44P16070 742 aaKnown RBP16.23■□□□□ 0.19
SPG7-215ENST00000566682 OSBPP22059 807 aa16.23■□□□□ 0.19
SPG7-215ENST00000566682 HOXA7P31268 230 aaPredicted RBP16.23■□□□□ 0.19
SPG7-215ENST00000566682 ATP2B2Q01814 1243 aa16.23■□□□□ 0.19
SPG7-215ENST00000566682 SP3Q02447 781 aa16.23■□□□□ 0.19
SPG7-215ENST00000566682 AKNAD1Q5T1N1 836 aa16.23■□□□□ 0.19
SPG7-215ENST00000566682 C17orf99Q6UX52 265 aa16.23■□□□□ 0.19
SPG7-215ENST00000566682 NEDD1Q8NHV4 660 aa16.23■□□□□ 0.19
SPG7-215ENST00000566682 TOMM22Q9NS69 142 aa16.23■□□□□ 0.19
SPG7-215ENST00000566682 CPA4Q9UI42 421 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms