RNA–Protein interactions for RNA: ENST00000565545.1

CSPG4P13-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

TSL 5

Gene CSPG4P13, Length 657 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-201ENST00000565545 DDIT3P35638 169 aa22.38■■□□□ 1.17
CSPG4P13-201ENST00000565545 APOBRQ0VD83 1088 aa22.38■■□□□ 1.17
CSPG4P13-201ENST00000565545 PRAMEF18Q5VWM3 479 aa22.38■■□□□ 1.17
CSPG4P13-201ENST00000565545 ZNF444Q8N0Y2 327 aaPredicted RBP22.38■■□□□ 1.17
CSPG4P13-201ENST00000565545 CHMP5Q9NZZ3 219 aa22.38■■□□□ 1.17
CSPG4P13-201ENST00000565545 ZNF70Q9UC06 446 aaPredicted RBP22.38■■□□□ 1.17
CSPG4P13-201ENST00000565545 CDK8P49336 464 aa22.37■■□□□ 1.17
CSPG4P13-201ENST00000565545 GABPAQ06546 454 aa22.37■■□□□ 1.17
CSPG4P13-201ENST00000565545 WTAPQ15007 396 aa22.37■■□□□ 1.17
CSPG4P13-201ENST00000565545 NBPF9Q3BBW0 867 aa22.37■■□□□ 1.17
CSPG4P13-201ENST00000565545 NKX2-3Q8TAU0 364 aa22.37■■□□□ 1.17
CSPG4P13-201ENST00000565545 GTF3C6Q969F1 213 aa22.37■■□□□ 1.17
CSPG4P13-201ENST00000565545 DYNLL2Q96FJ2 89 aa22.37■■□□□ 1.17
CSPG4P13-201ENST00000565545 ZSCAN10Q96SZ4 725 aaPredicted RBP22.37■■□□□ 1.17
CSPG4P13-201ENST00000565545 LY9Q9HBG7 655 aa22.37■■□□□ 1.17
CSPG4P13-201ENST00000565545 SERPINB13Q9UIV8 391 aa22.37■■□□□ 1.17
CSPG4P13-201ENST00000565545 ATRNL1Q5VV63 1379 aa22.37■■□□□ 1.17
CSPG4P13-201ENST00000565545 MYH8P13535 1937 aa22.36■■□□□ 1.17
CSPG4P13-201ENST00000565545 PRDM1O75626 825 aa22.36■■□□□ 1.17
CSPG4P13-201ENST00000565545 PDIA3P30101 505 aaKnown RBP22.36■■□□□ 1.17
CSPG4P13-201ENST00000565545 NF2P35240 595 aa22.36■■□□□ 1.17
CSPG4P13-201ENST00000565545 RCAN1P53805 252 aa22.36■■□□□ 1.17
CSPG4P13-201ENST00000565545 EVX2Q03828 476 aa22.36■■□□□ 1.17
CSPG4P13-201ENST00000565545 FOXP4Q8IVH2 680 aaPredicted RBP22.36■■□□□ 1.17
CSPG4P13-201ENST00000565545 CCDC83Q8IWF9 413 aa22.36■■□□□ 1.17
CSPG4P13-201ENST00000565545 FOXD4L1Q9NU39 408 aa22.36■■□□□ 1.17
CSPG4P13-201ENST00000565545 TCP11L1Q9NUJ3 509 aa22.36■■□□□ 1.17
CSPG4P13-201ENST00000565545 PI4KBQ9UBF8 816 aa22.36■■□□□ 1.17
CSPG4P13-201ENST00000565545 KLF18A0A0U1RQI7 1052 aa22.35■■□□□ 1.17
CSPG4P13-201ENST00000565545 CCDC69A6NI79 296 aa22.35■■□□□ 1.17
CSPG4P13-201ENST00000565545 TSPY2A6NKD2 308 aa22.35■■□□□ 1.17
CSPG4P13-201ENST00000565545 SLC4A8Q2Y0W8 1093 aa22.35■■□□□ 1.17
CSPG4P13-201ENST00000565545 SYNE3Q6ZMZ3 975 aa22.35■■□□□ 1.17
CSPG4P13-201ENST00000565545 FAM83AQ86UY5 434 aa22.35■■□□□ 1.17
CSPG4P13-201ENST00000565545 LLPHQ9BRT6 129 aaKnown RBP22.35■■□□□ 1.17
CSPG4P13-201ENST00000565545 WNT10BO00744 389 aa22.34■■□□□ 1.17
CSPG4P13-201ENST00000565545 DHX16O60231 1041 aaKnown RBP22.34■■□□□ 1.17
CSPG4P13-201ENST00000565545 TBC1D8O95759 1140 aa22.34■■□□□ 1.17
CSPG4P13-201ENST00000565545 RASA1P20936 1047 aa22.34■■□□□ 1.17
CSPG4P13-201ENST00000565545 CACNB3P54284 484 aa22.34■■□□□ 1.17
CSPG4P13-201ENST00000565545 TFAP4Q01664 338 aa22.34■■□□□ 1.17
CSPG4P13-201ENST00000565545 SEC23AQ15436 765 aa22.34■■□□□ 1.17
CSPG4P13-201ENST00000565545 NFXL1Q6ZNB6 911 aa22.34■■□□□ 1.17
CSPG4P13-201ENST00000565545 NECAB1Q8N987 351 aa22.34■■□□□ 1.17
CSPG4P13-201ENST00000565545 FAM151AQ8WW52 585 aa22.34■■□□□ 1.17
CSPG4P13-201ENST00000565545 GPHNQ9NQX3 736 aaPredicted RBP22.34■■□□□ 1.17
CSPG4P13-201ENST00000565545 BRPF3Q9ULD4 1205 aa22.34■■□□□ 1.17
CSPG4P13-201ENST00000565545 SMC3Q9UQE7 1217 aa22.34■■□□□ 1.17
CSPG4P13-201ENST00000565545 TNKSO95271 1327 aa22.33■■□□□ 1.17
CSPG4P13-201ENST00000565545 TSPY3P0CV98 308 aa22.33■■□□□ 1.17
CSPG4P13-201ENST00000565545 TSPY8P0CW00 308 aa22.33■■□□□ 1.17
CSPG4P13-201ENST00000565545 PDIA4P13667 645 aaKnown RBP22.33■■□□□ 1.17
CSPG4P13-201ENST00000565545 TNNI2P48788 182 aa22.33■■□□□ 1.17
CSPG4P13-201ENST00000565545 TCP10Q12799 353 aa22.33■■□□□ 1.17
CSPG4P13-201ENST00000565545 ANKS1AQ92625 1134 aa22.33■■□□□ 1.17
CSPG4P13-201ENST00000565545 SLC12A7Q9Y666 1083 aa22.33■■□□□ 1.17
CSPG4P13-201ENST00000565545 GOLGA8BA8MQT2 603 aa22.32■■□□□ 1.16
CSPG4P13-201ENST00000565545 NUCB2P80303 420 aa22.32■■□□□ 1.16
CSPG4P13-201ENST00000565545 ST3GAL1Q11201 340 aa22.32■■□□□ 1.16
CSPG4P13-201ENST00000565545 MKRN3Q13064 507 aaKnown RBP22.32■■□□□ 1.16
CSPG4P13-201ENST00000565545 STK3Q13188 491 aa22.32■■□□□ 1.16
CSPG4P13-201ENST00000565545 TNFAIP1Q13829 316 aa22.32■■□□□ 1.16
CSPG4P13-201ENST00000565545 FAM47AQ5JRC9 791 aa22.32■■□□□ 1.16
CSPG4P13-201ENST00000565545 APOA5Q6Q788 366 aa22.32■■□□□ 1.16
CSPG4P13-201ENST00000565545 METTL16Q86W50 562 aaKnown RBP22.32■■□□□ 1.16
CSPG4P13-201ENST00000565545 DGKHQ86XP1 1220 aa22.32■■□□□ 1.16
CSPG4P13-201ENST00000565545 ZSCAN29Q8IWY8 852 aaPredicted RBP22.32■■□□□ 1.16
CSPG4P13-201ENST00000565545 ZFPM1Q8IX07 1006 aa22.32■■□□□ 1.16
CSPG4P13-201ENST00000565545 NEDD1Q8NHV4 660 aa22.32■■□□□ 1.16
CSPG4P13-201ENST00000565545 ZKSCAN3Q9BRR0 538 aa22.32■■□□□ 1.16
CSPG4P13-201ENST00000565545 NAP1L2Q9ULW6 460 aaPredicted RBP22.32■■□□□ 1.16
CSPG4P13-201ENST00000565545 SIPA1L1O43166 1804 aa22.31■■□□□ 1.16
CSPG4P13-201ENST00000565545 CLRN2A0PK11 232 aa22.31■■□□□ 1.16
CSPG4P13-201ENST00000565545 ZBTB43O43298 467 aa22.31■■□□□ 1.16
CSPG4P13-201ENST00000565545 SCRN1Q12765 414 aa22.31■■□□□ 1.16
CSPG4P13-201ENST00000565545 PPP2R5BQ15173 497 aa22.31■■□□□ 1.16
CSPG4P13-201ENST00000565545 PKN2Q16513 984 aaKnown RBP22.31■■□□□ 1.16
CSPG4P13-201ENST00000565545 IFIT1BQ5T764 474 aaKnown RBP22.31■■□□□ 1.16
CSPG4P13-201ENST00000565545 CRACR2BQ8N4Y2 399 aaPredicted RBP22.31■■□□□ 1.16
CSPG4P13-201ENST00000565545 ENAHQ8N8S7 591 aaPredicted RBP22.31■■□□□ 1.16
CSPG4P13-201ENST00000565545 SLC44A5Q8NCS7 719 aa22.31■■□□□ 1.16
CSPG4P13-201ENST00000565545 CCDC17Q96LX7 622 aa22.31■■□□□ 1.16
CSPG4P13-201ENST00000565545 TRIM34Q9BYJ4 488 aa22.31■■□□□ 1.16
CSPG4P13-201ENST00000565545 HPS5Q9UPZ3 1129 aa22.31■■□□□ 1.16
CSPG4P13-201ENST00000565545 NID2Q14112 1375 aa22.3■■□□□ 1.16
CSPG4P13-201ENST00000565545 PLIN4Q96Q06 1357 aa22.3■■□□□ 1.16
CSPG4P13-201ENST00000565545 DDTLA6NHG4 134 aaPredicted RBP22.3■■□□□ 1.16
CSPG4P13-201ENST00000565545 TCP10L2B9ZVM9 353 aa22.3■■□□□ 1.16
CSPG4P13-201ENST00000565545 PRKG1Q13976 671 aa22.3■■□□□ 1.16
CSPG4P13-201ENST00000565545 SH3BP5LQ7L8J4 393 aa22.3■■□□□ 1.16
CSPG4P13-201ENST00000565545 ARMC9Q7Z3E5 817 aa22.3■■□□□ 1.16
CSPG4P13-201ENST00000565545 ZNF296Q8WUU4 475 aaPredicted RBP22.3■■□□□ 1.16
CSPG4P13-201ENST00000565545 VEZTQ9HBM0 779 aa22.3■■□□□ 1.16
CSPG4P13-201ENST00000565545 PAPPA2Q9BXP8 1791 aa22.3■■□□□ 1.16
CSPG4P13-201ENST00000565545 CALM1P0DP23 149 aa22.29■■□□□ 1.16
CSPG4P13-201ENST00000565545 CALM2P0DP24 149 aa22.29■■□□□ 1.16
CSPG4P13-201ENST00000565545 CALM3P0DP25 149 aa22.29■■□□□ 1.16
CSPG4P13-201ENST00000565545 TM4SF4P48230 202 aa22.29■■□□□ 1.16
CSPG4P13-201ENST00000565545 METAP2P50579 478 aaKnown RBP eCLIP22.29■■□□□ 1.16
CSPG4P13-201ENST00000565545 PPP4R3BQ5MIZ7 849 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms