RNA–Protein interactions for RNA: ENST00000562570.1

AC009041.2-203, humanhuman

TSL 1 (best)

Gene AC009041.2, Length 3,222 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009041.2-203ENST00000562570 LIFRP42702 1097 aa20.22■□□□□ 0.83
AC009041.2-203ENST00000562570 STAG1Q8WVM7 1258 aa20.22■□□□□ 0.83
AC009041.2-203ENST00000562570 NSUN4Q96CB9 384 aaKnown RBP20.22■□□□□ 0.83
AC009041.2-203ENST00000562570 KAT14Q9H8E8 782 aa20.22■□□□□ 0.83
AC009041.2-203ENST00000562570 KRT2P35908 639 aa20.22■□□□□ 0.83
AC009041.2-203ENST00000562570 SCNN1DP51172 638 aa20.22■□□□□ 0.83
AC009041.2-203ENST00000562570 NCBP1Q09161 790 aaKnown RBP20.22■□□□□ 0.83
AC009041.2-203ENST00000562570 MSL1Q68DK7 614 aa20.22■□□□□ 0.83
AC009041.2-203ENST00000562570 AK7Q96M32 723 aa20.22■□□□□ 0.83
AC009041.2-203ENST00000562570 CRNKL1Q9BZJ0 848 aaKnown RBP20.22■□□□□ 0.83
AC009041.2-203ENST00000562570 CACNB3P54284 484 aa20.21■□□□□ 0.83
AC009041.2-203ENST00000562570 INF2Q27J81 1249 aa20.21■□□□□ 0.83
AC009041.2-203ENST00000562570 USP17L2Q6R6M4 530 aa20.21■□□□□ 0.83
AC009041.2-203ENST00000562570 ST7Q9NRC1 585 aa20.21■□□□□ 0.83
AC009041.2-203ENST00000562570 FRMPD2Q68DX3 1309 aaPredicted RBP20.21■□□□□ 0.83
AC009041.2-203ENST00000562570 UFL1O94874 794 aa20.21■□□□□ 0.83
AC009041.2-203ENST00000562570 RESP18Q5W5W9 173 aa20.21■□□□□ 0.83
AC009041.2-203ENST00000562570 SGMS1Q86VZ5 419 aa20.21■□□□□ 0.83
AC009041.2-203ENST00000562570 LAMA4Q16363 1823 aa20.21■□□□□ 0.83
AC009041.2-203ENST00000562570 NRDCO43847 1150 aa20.21■□□□□ 0.83
AC009041.2-203ENST00000562570 TRMT1LQ7Z2T5 733 aaKnown RBP20.21■□□□□ 0.83
AC009041.2-203ENST00000562570 KIF18AQ8NI77 898 aa20.21■□□□□ 0.83
AC009041.2-203ENST00000562570 WASF1Q92558 559 aa20.21■□□□□ 0.83
AC009041.2-203ENST00000562570 HPS3Q969F9 1004 aa20.21■□□□□ 0.83
AC009041.2-203ENST00000562570 CTNND2Q9UQB3 1225 aa20.21■□□□□ 0.83
AC009041.2-203ENST00000562570 CUTAO60888 179 aa20.2■□□□□ 0.82
AC009041.2-203ENST00000562570 LDHBP07195 334 aaKnown RBP20.2■□□□□ 0.82
AC009041.2-203ENST00000562570 ZNF444Q8N0Y2 327 aaPredicted RBP20.2■□□□□ 0.82
AC009041.2-203ENST00000562570 TFR2Q9UP52 801 aa20.2■□□□□ 0.82
AC009041.2-203ENST00000562570 GNG11P61952 73 aa20.2■□□□□ 0.82
AC009041.2-203ENST00000562570 RRAGBQ5VZM2 374 aa20.2■□□□□ 0.82
AC009041.2-203ENST00000562570 BSDC1Q9NW68 430 aaPredicted RBP20.2■□□□□ 0.82
AC009041.2-203ENST00000562570 FBXO2Q9UK22 296 aaPredicted RBP20.2■□□□□ 0.82
AC009041.2-203ENST00000562570 CRYBG1Q9Y4K1 1723 aa20.19■□□□□ 0.82
AC009041.2-203ENST00000562570 GNAT2P19087 354 aa20.19■□□□□ 0.82
AC009041.2-203ENST00000562570 DOK7Q18PE1 504 aa20.19■□□□□ 0.82
AC009041.2-203ENST00000562570 PPP1R13BQ96KQ4 1090 aa20.19■□□□□ 0.82
AC009041.2-203ENST00000562570 POLD4Q9HCU8 107 aa20.19■□□□□ 0.82
AC009041.2-203ENST00000562570 G3V3G9 751 aa20.19■□□□□ 0.82
AC009041.2-203ENST00000562570 MPHOSPH10O00566 681 aaKnown RBP20.19■□□□□ 0.82
AC009041.2-203ENST00000562570 RILPL1Q5EBL4 403 aa20.19■□□□□ 0.82
AC009041.2-203ENST00000562570 TTC38Q5R3I4 469 aa20.19■□□□□ 0.82
AC009041.2-203ENST00000562570 DCAF8Q5TAQ9 597 aa20.19■□□□□ 0.82
AC009041.2-203ENST00000562570 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.19■□□□□ 0.82
AC009041.2-203ENST00000562570 RAD51AP2Q09MP3 1159 aa20.19■□□□□ 0.82
AC009041.2-203ENST00000562570 PKN1Q16512 942 aa20.19■□□□□ 0.82
AC009041.2-203ENST00000562570 LETM2Q2VYF4 491 aa20.19■□□□□ 0.82
AC009041.2-203ENST00000562570 RPGRQ92834 1020 aaKnown RBP20.19■□□□□ 0.82
AC009041.2-203ENST00000562570 BRMS1Q9HCU9 246 aa20.19■□□□□ 0.82
AC009041.2-203ENST00000562570 CD44P16070 742 aaKnown RBP20.18■□□□□ 0.82
AC009041.2-203ENST00000562570 JAKMIP3Q5VZ66 844 aa20.18■□□□□ 0.82
AC009041.2-203ENST00000562570 ATL3Q6DD88 541 aa20.18■□□□□ 0.82
AC009041.2-203ENST00000562570 GDAQ9Y2T3 454 aa20.18■□□□□ 0.82
AC009041.2-203ENST00000562570 N4BP2Q86UW6 1770 aaPredicted RBP20.18■□□□□ 0.82
AC009041.2-203ENST00000562570 TRIM49BA6NDI0 452 aa20.18■□□□□ 0.82
AC009041.2-203ENST00000562570 CNBD1Q8NA66 436 aa20.18■□□□□ 0.82
AC009041.2-203ENST00000562570 PNMA1Q8ND90 353 aa20.18■□□□□ 0.82
AC009041.2-203ENST00000562570 PCMTD1Q96MG8 357 aaPredicted RBP20.18■□□□□ 0.82
AC009041.2-203ENST00000562570 SLIT2O94813 1529 aa20.18■□□□□ 0.82
AC009041.2-203ENST00000562570 TCP10Q12799 353 aa20.17■□□□□ 0.82
AC009041.2-203ENST00000562570 TOGARAM2Q6ZUX3 1019 aa20.17■□□□□ 0.82
AC009041.2-203ENST00000562570 LRRC47Q8N1G4 583 aaKnown RBP20.17■□□□□ 0.82
AC009041.2-203ENST00000562570 QTRT2Q9H974 415 aaKnown RBP20.17■□□□□ 0.82
AC009041.2-203ENST00000562570 TRAPPC3LQ5T215 181 aa20.17■□□□□ 0.82
AC009041.2-203ENST00000562570 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.17■□□□□ 0.82
AC009041.2-203ENST00000562570 HSD3B7Q9H2F3 369 aa20.17■□□□□ 0.82
AC009041.2-203ENST00000562570 TAB2Q9NYJ8 693 aa20.17■□□□□ 0.82
AC009041.2-203ENST00000562570 COL4A1P02462 1669 aa20.17■□□□□ 0.82
AC009041.2-203ENST00000562570 SOWAHDA6NJG2 315 aa20.17■□□□□ 0.82
AC009041.2-203ENST00000562570 SSBP05455 408 aaKnown RBP eCLIP20.17■□□□□ 0.82
AC009041.2-203ENST00000562570 TROAPQ12815 778 aa20.17■□□□□ 0.82
AC009041.2-203ENST00000562570 CUL4BQ13620 913 aa20.17■□□□□ 0.82
AC009041.2-203ENST00000562570 NOL10Q9BSC4 688 aaKnown RBP20.17■□□□□ 0.82
AC009041.2-203ENST00000562570 RBM5P52756 815 aaKnown RBP eCLIP20.16■□□□□ 0.82
AC009041.2-203ENST00000562570 ENOX2Q16206 610 aaKnown RBP20.16■□□□□ 0.82
AC009041.2-203ENST00000562570 GPCPD1Q9NPB8 672 aa20.16■□□□□ 0.82
AC009041.2-203ENST00000562570 GTF2IP78347 998 aa20.16■□□□□ 0.82
AC009041.2-203ENST00000562570 UBE4AQ14139 1066 aa20.16■□□□□ 0.82
AC009041.2-203ENST00000562570 KCTD19Q17RG1 926 aaPredicted RBP20.16■□□□□ 0.82
AC009041.2-203ENST00000562570 TYW1BQ6NUM6 668 aa20.16■□□□□ 0.82
AC009041.2-203ENST00000562570 CCDC194A0A1B0GVG4 234 aa20.15■□□□□ 0.82
AC009041.2-203ENST00000562570 PTPREP23469 700 aa20.15■□□□□ 0.82
AC009041.2-203ENST00000562570 TEX35Q5T0J7 233 aa20.15■□□□□ 0.82
AC009041.2-203ENST00000562570 MNS1Q8NEH6 495 aa20.15■□□□□ 0.82
AC009041.2-203ENST00000562570 SCAF8Q9UPN6 1271 aaKnown RBP20.15■□□□□ 0.82
AC009041.2-203ENST00000562570 COL16A1Q07092 1604 aaPredicted RBP20.15■□□□□ 0.82
AC009041.2-203ENST00000562570 TRIM37O94972 964 aa20.15■□□□□ 0.82
AC009041.2-203ENST00000562570 SEC23AQ15436 765 aa20.15■□□□□ 0.82
AC009041.2-203ENST00000562570 CARD6Q9BX69 1037 aa20.15■□□□□ 0.82
AC009041.2-203ENST00000562570 BIN2Q9UBW5 565 aaPredicted RBP20.15■□□□□ 0.82
AC009041.2-203ENST00000562570 PUF60Q9UHX1 559 aaKnown RBP20.15■□□□□ 0.82
AC009041.2-203ENST00000562570 HOOK1Q9UJC3 728 aaKnown RBP20.15■□□□□ 0.82
AC009041.2-203ENST00000562570 PPP6R2O75170 966 aa20.15■□□□□ 0.82
AC009041.2-203ENST00000562570 SNAP25P60880 206 aa20.15■□□□□ 0.82
AC009041.2-203ENST00000562570 SMARCC1Q92922 1105 aaPredicted RBP20.15■□□□□ 0.82
AC009041.2-203ENST00000562570 INTS13Q9NVM9 706 aa20.15■□□□□ 0.82
AC009041.2-203ENST00000562570 RBM6P78332 1123 aaKnown RBP20.14■□□□□ 0.82
AC009041.2-203ENST00000562570 MTERF4Q7Z6M4 381 aaKnown RBP20.14■□□□□ 0.82
AC009041.2-203ENST00000562570 BAZ2AQ9UIF9 1905 aaKnown RBP20.14■□□□□ 0.81
AC009041.2-203ENST00000562570 MYH2Q9UKX2 1941 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms