RNA–Protein interactions for RNA: ENST00000561643.5

NEIL1-202, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 5

Gene NEIL1, Length 3,271 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-202ENST00000561643 CSRNP2Q9H175 543 aa12.5□□□□□ -0.41
NEIL1-202ENST00000561643 CYP2D7A0A087X1C5 515 aa12.5□□□□□ -0.41
NEIL1-202ENST00000561643 TRIM75PA6NK02 468 aa12.5□□□□□ -0.41
NEIL1-202ENST00000561643 TRIM66O15016 1216 aa12.5□□□□□ -0.41
NEIL1-202ENST00000561643 PRDM1O75626 825 aa12.5□□□□□ -0.41
NEIL1-202ENST00000561643 TUBB4AP04350 444 aa12.5□□□□□ -0.41
NEIL1-202ENST00000561643 SEC23AQ15436 765 aa12.5□□□□□ -0.41
NEIL1-202ENST00000561643 IFIT1BQ5T764 474 aaKnown RBP12.5□□□□□ -0.41
NEIL1-202ENST00000561643 KANK3Q6NY19 840 aa12.5□□□□□ -0.41
NEIL1-202ENST00000561643 CATIPQ7Z7H3 387 aa12.5□□□□□ -0.41
NEIL1-202ENST00000561643 ZSCAN10Q96SZ4 725 aaPredicted RBP12.5□□□□□ -0.41
NEIL1-202ENST00000561643 DNAI1Q9UI46 699 aa12.5□□□□□ -0.41
NEIL1-202ENST00000561643 FHOD1Q9Y613 1164 aa12.5□□□□□ -0.41
NEIL1-202ENST00000561643 DOT1LQ8TEK3 1739 aa12.5□□□□□ -0.41
NEIL1-202ENST00000561643 DYNLL1P63167 89 aaKnown RBP12.5□□□□□ -0.41
NEIL1-202ENST00000561643 FMR1Q06787 632 aaKnown RBP eCLIP12.5□□□□□ -0.41
NEIL1-202ENST00000561643 PPP2R5BQ15173 497 aa12.5□□□□□ -0.41
NEIL1-202ENST00000561643 CAVIN4Q5BKX8 364 aa12.5□□□□□ -0.41
NEIL1-202ENST00000561643 USP49Q70CQ1 688 aa12.5□□□□□ -0.41
NEIL1-202ENST00000561643 ENAHQ8N8S7 591 aaPredicted RBP12.5□□□□□ -0.41
NEIL1-202ENST00000561643 CCDC34Q96HJ3 373 aa12.5□□□□□ -0.41
NEIL1-202ENST00000561643 NGLY1Q96IV0 654 aa12.5□□□□□ -0.41
NEIL1-202ENST00000561643 CDCA7Q9BWT1 371 aaPredicted RBP12.5□□□□□ -0.41
NEIL1-202ENST00000561643 ANAPC4Q9UJX5 808 aa12.5□□□□□ -0.41
NEIL1-202ENST00000561643 FAM205CA6NFA0 338 aa12.49□□□□□ -0.41
NEIL1-202ENST00000561643 WTIPA6NIX2 430 aaPredicted RBP12.49□□□□□ -0.41
NEIL1-202ENST00000561643 KRT2P35908 639 aa12.49□□□□□ -0.41
NEIL1-202ENST00000561643 GYS2P54840 703 aa12.49□□□□□ -0.41
NEIL1-202ENST00000561643 ETF1P62495 437 aaKnown RBP12.49□□□□□ -0.41
NEIL1-202ENST00000561643 IQCA1Q86XH1 822 aa12.49□□□□□ -0.41
NEIL1-202ENST00000561643 DHX58Q96C10 678 aa12.49□□□□□ -0.41
NEIL1-202ENST00000561643 L2HGDHQ9H9P8 463 aa12.49□□□□□ -0.41
NEIL1-202ENST00000561643 INTS13Q9NVM9 706 aa12.49□□□□□ -0.41
NEIL1-202ENST00000561643 PLA2G4AP47712 749 aa12.49□□□□□ -0.41
NEIL1-202ENST00000561643 CLCN6P51797 869 aa12.49□□□□□ -0.41
NEIL1-202ENST00000561643 FAM193AP78312 1265 aa12.49□□□□□ -0.41
NEIL1-202ENST00000561643 MORC3Q14149 939 aa12.49□□□□□ -0.41
NEIL1-202ENST00000561643 NT5DC1Q5TFE4 455 aa12.49□□□□□ -0.41
NEIL1-202ENST00000561643 V9GY48 417 aaPredicted RBP12.49□□□□□ -0.41
NEIL1-202ENST00000561643 ZNF804BA4D1E1 1349 aa12.49□□□□□ -0.41
NEIL1-202ENST00000561643 ACTN4O43707 911 aaKnown RBP12.49□□□□□ -0.41
NEIL1-202ENST00000561643 PNMA6AP0CW24 399 aaPredicted RBP12.49□□□□□ -0.41
NEIL1-202ENST00000561643 HSPA1LP34931 641 aa12.49□□□□□ -0.41
NEIL1-202ENST00000561643 CREBRFQ8IUR6 639 aa12.49□□□□□ -0.41
NEIL1-202ENST00000561643 TRIML1Q8N9V2 468 aa12.49□□□□□ -0.41
NEIL1-202ENST00000561643 ENOX1Q8TC92 643 aaKnown RBP12.49□□□□□ -0.41
NEIL1-202ENST00000561643 RIOK1Q9BRS2 568 aaKnown RBP12.49□□□□□ -0.41
NEIL1-202ENST00000561643 RASSF4Q9H2L5 321 aa12.49□□□□□ -0.41
NEIL1-202ENST00000561643 ZSCAN12O43309 604 aa12.48□□□□□ -0.41
NEIL1-202ENST00000561643 PLEKHA8P1O95397 391 aa12.48□□□□□ -0.41
NEIL1-202ENST00000561643 SARSP49591 514 aaKnown RBP12.48□□□□□ -0.41
NEIL1-202ENST00000561643 PSEN1P49768 467 aa12.48□□□□□ -0.41
NEIL1-202ENST00000561643 ST5P78524 1137 aa12.48□□□□□ -0.41
NEIL1-202ENST00000561643 UBE4AQ14139 1066 aa12.48□□□□□ -0.41
NEIL1-202ENST00000561643 ERFEQ4G0M1 354 aa12.48□□□□□ -0.41
NEIL1-202ENST00000561643 BRMS1Q9HCU9 246 aa12.48□□□□□ -0.41
NEIL1-202ENST00000561643 LCMT1Q9UIC8 334 aa12.48□□□□□ -0.41
NEIL1-202ENST00000561643 ARHGAP6O43182 974 aa12.48□□□□□ -0.41
NEIL1-202ENST00000561643 AFMP43652 599 aa12.48□□□□□ -0.41
NEIL1-202ENST00000561643 PKN1Q16512 942 aa12.47□□□□□ -0.41
NEIL1-202ENST00000561643 BICDL1Q6ZP65 573 aa12.47□□□□□ -0.41
NEIL1-202ENST00000561643 C3orf67Q6ZVT6 689 aa12.47□□□□□ -0.41
NEIL1-202ENST00000561643 MARCH10Q8NA82 808 aaPredicted RBP12.47□□□□□ -0.41
NEIL1-202ENST00000561643 SHISA4Q96DD7 197 aa12.47□□□□□ -0.41
NEIL1-202ENST00000561643 BAG1Q99933 345 aaPredicted RBP12.47□□□□□ -0.41
NEIL1-202ENST00000561643 RBM28Q9NW13 759 aaKnown RBP12.47□□□□□ -0.41
NEIL1-202ENST00000561643 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.47□□□□□ -0.41
NEIL1-202ENST00000561643 BCORQ6W2J9 1755 aa12.47□□□□□ -0.41
NEIL1-202ENST00000561643 PRPF3O43395 683 aaKnown RBP12.47□□□□□ -0.41
NEIL1-202ENST00000561643 H2AFXP16104 143 aaPredicted RBP12.47□□□□□ -0.41
NEIL1-202ENST00000561643 ZNF18P17022 549 aa12.47□□□□□ -0.41
NEIL1-202ENST00000561643 EARS2Q5JPH6 523 aaKnown RBP12.47□□□□□ -0.41
NEIL1-202ENST00000561643 SPECC1LQ69YQ0 1117 aa12.47□□□□□ -0.41
NEIL1-202ENST00000561643 FAM177A1Q8N128 213 aaPredicted RBP12.47□□□□□ -0.41
NEIL1-202ENST00000561643 EPSTI1Q96J88 318 aa12.47□□□□□ -0.41
NEIL1-202ENST00000561643 PHF20Q9BVI0 1012 aa12.47□□□□□ -0.41
NEIL1-202ENST00000561643 BRIP1Q9BX63 1249 aa12.47□□□□□ -0.41
NEIL1-202ENST00000561643 SAMSN1Q9NSI8 373 aaKnown RBP12.47□□□□□ -0.41
NEIL1-202ENST00000561643 AATFQ9NY61 560 aaKnown RBP eCLIP12.47□□□□□ -0.41
NEIL1-202ENST00000561643 BCL9LQ86UU0 1499 aa12.47□□□□□ -0.41
NEIL1-202ENST00000561643 PHLPP2Q6ZVD8 1323 aa12.47□□□□□ -0.41
NEIL1-202ENST00000561643 PLCH1Q4KWH8 1693 aa12.47□□□□□ -0.41
NEIL1-202ENST00000561643 PLCD1P51178 756 aa12.47□□□□□ -0.41
NEIL1-202ENST00000561643 KLHL10Q6JEL2 608 aa12.47□□□□□ -0.41
NEIL1-202ENST00000561643 FCHSD1Q86WN1 690 aa12.47□□□□□ -0.41
NEIL1-202ENST00000561643 ZNF526Q8TF50 670 aaPredicted RBP12.47□□□□□ -0.41
NEIL1-202ENST00000561643 BSDC1Q9NW68 430 aaPredicted RBP12.47□□□□□ -0.41
NEIL1-202ENST00000561643 SPATA31A1Q5TZJ5 1347 aa12.46□□□□□ -0.41
NEIL1-202ENST00000561643 USP17L12C9JPN9 530 aa12.46□□□□□ -0.41
NEIL1-202ENST00000561643 USP17L21D6R901 530 aa12.46□□□□□ -0.41
NEIL1-202ENST00000561643 CALM1P0DP23 149 aa12.46□□□□□ -0.41
NEIL1-202ENST00000561643 CALM2P0DP24 149 aa12.46□□□□□ -0.41
NEIL1-202ENST00000561643 CALM3P0DP25 149 aa12.46□□□□□ -0.41
NEIL1-202ENST00000561643 ADKP55263 362 aaKnown RBP12.46□□□□□ -0.41
NEIL1-202ENST00000561643 CCDC93Q567U6 631 aa12.46□□□□□ -0.41
NEIL1-202ENST00000561643 TEX35Q5T0J7 233 aa12.46□□□□□ -0.41
NEIL1-202ENST00000561643 EFCC1Q9HA90 598 aa12.46□□□□□ -0.41
NEIL1-202ENST00000561643 ZCCHC17Q9NP64 241 aaKnown RBP12.46□□□□□ -0.41
NEIL1-202ENST00000561643 PPP2R2CQ9Y2T4 447 aa12.46□□□□□ -0.41
NEIL1-202ENST00000561643 COL1A1P02452 1464 aaPredicted RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms