RNA–Protein interactions for RNA: ENST00000560511.5

CHRNB4-205, Transcript of cholinergic receptor nicotinic beta 4 subunit, humanhuman

TSL 3

Gene CHRNB4, Length 727 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB4-205ENST00000560511 C11orf49Q9H6J7 331 aa10.25□□□□□ -0.77
CHRNB4-205ENST00000560511 HMX1Q9NP08 348 aaPredicted RBP10.25□□□□□ -0.77
CHRNB4-205ENST00000560511 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.25□□□□□ -0.77
CHRNB4-205ENST00000560511 SAP30BPQ9UHR5 308 aaKnown RBP10.25□□□□□ -0.77
CHRNB4-205ENST00000560511 SLC45A1Q9Y2W3 748 aa10.25□□□□□ -0.77
CHRNB4-205ENST00000560511 AFG3L2Q9Y4W6 797 aa10.25□□□□□ -0.77
CHRNB4-205ENST00000560511 DOCK2Q92608 1830 aa10.25□□□□□ -0.77
CHRNB4-205ENST00000560511 RIOK3O14730 519 aaKnown RBP10.24□□□□□ -0.77
CHRNB4-205ENST00000560511 TBC1D12O60347 775 aa10.24□□□□□ -0.77
CHRNB4-205ENST00000560511 CTNND1O60716 968 aaKnown RBP10.24□□□□□ -0.77
CHRNB4-205ENST00000560511 HMGCRP04035 888 aa10.24□□□□□ -0.77
CHRNB4-205ENST00000560511 PDE6AP16499 860 aa10.24□□□□□ -0.77
CHRNB4-205ENST00000560511 USP5P45974 858 aa10.24□□□□□ -0.77
CHRNB4-205ENST00000560511 TRIM32Q13049 653 aa10.24□□□□□ -0.77
CHRNB4-205ENST00000560511 LRIT3Q3SXY7 679 aa10.24□□□□□ -0.77
CHRNB4-205ENST00000560511 SLC9C2Q5TAH2 1124 aa10.24□□□□□ -0.77
CHRNB4-205ENST00000560511 DCTPP1Q9H773 170 aa10.24□□□□□ -0.77
CHRNB4-205ENST00000560511 PI4KBQ9UBF8 816 aa10.24□□□□□ -0.77
CHRNB4-205ENST00000560511 PNMA3Q9UL41 463 aa10.24□□□□□ -0.77
CHRNB4-205ENST00000560511 PCDHB15Q9Y5E8 787 aa10.24□□□□□ -0.77
CHRNB4-205ENST00000560511 ALPK3Q96L96 1907 aa10.24□□□□□ -0.77
CHRNB4-205ENST00000560511 DOCK3Q8IZD9 2030 aa10.24□□□□□ -0.77
CHRNB4-205ENST00000560511 ATMINO43313 823 aaPredicted RBP10.23□□□□□ -0.77
CHRNB4-205ENST00000560511 ATP5JP18859 108 aa10.23□□□□□ -0.77
CHRNB4-205ENST00000560511 PDAP1Q13442 181 aaKnown RBP10.23□□□□□ -0.77
CHRNB4-205ENST00000560511 RRP1BQ14684 758 aaKnown RBP10.23□□□□□ -0.77
CHRNB4-205ENST00000560511 TREML2Q5T2D2 321 aa10.23□□□□□ -0.77
CHRNB4-205ENST00000560511 CERS3Q8IU89 383 aa10.23□□□□□ -0.77
CHRNB4-205ENST00000560511 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.23□□□□□ -0.77
CHRNB4-205ENST00000560511 CRACR2BQ8N4Y2 399 aaPredicted RBP10.23□□□□□ -0.77
CHRNB4-205ENST00000560511 FAM161BQ96MY7 647 aa10.23□□□□□ -0.77
CHRNB4-205ENST00000560511 TRIM34Q9BYJ4 488 aa10.23□□□□□ -0.77
CHRNB4-205ENST00000560511 DHX36Q9H2U1 1008 aaKnown RBP10.23□□□□□ -0.77
CHRNB4-205ENST00000560511 PAG1Q9NWQ8 432 aa10.23□□□□□ -0.77
CHRNB4-205ENST00000560511 HERC5Q9UII4 1024 aaKnown RBP10.23□□□□□ -0.77
CHRNB4-205ENST00000560511 PALD1Q9ULE6 856 aa10.23□□□□□ -0.77
CHRNB4-205ENST00000560511 AGTPBP1Q9UPW5 1226 aa10.23□□□□□ -0.77
CHRNB4-205ENST00000560511 RPTORQ8N122 1335 aa10.23□□□□□ -0.77
CHRNB4-205ENST00000560511 ZNF532Q9HCE3 1301 aa10.23□□□□□ -0.77
CHRNB4-205ENST00000560511 LAMA2P24043 3122 aaKnown RBP10.23□□□□□ -0.77
CHRNB4-205ENST00000560511 MAGEB6P1A0A0J9YX57 407 aa10.22□□□□□ -0.77
CHRNB4-205ENST00000560511 HLA-DOAP06340 250 aa10.22□□□□□ -0.77
CHRNB4-205ENST00000560511 MDM2Q00987 491 aaPredicted RBP10.22□□□□□ -0.77
CHRNB4-205ENST00000560511 FAM110CQ1W6H9 321 aa10.22□□□□□ -0.77
CHRNB4-205ENST00000560511 TMED8Q6PL24 325 aaPredicted RBP10.22□□□□□ -0.77
CHRNB4-205ENST00000560511 HAUS7Q99871 368 aa10.22□□□□□ -0.77
CHRNB4-205ENST00000560511 RIOK1Q9BRS2 568 aaKnown RBP10.22□□□□□ -0.77
CHRNB4-205ENST00000560511 DNAJC18Q9H819 358 aa10.22□□□□□ -0.77
CHRNB4-205ENST00000560511 BMP2KQ9NSY1 1161 aaPredicted RBP10.22□□□□□ -0.77
CHRNB4-205ENST00000560511 MYO5AQ9Y4I1 1855 aaKnown RBP10.21□□□□□ -0.77
CHRNB4-205ENST00000560511 TCRBV5S4A2TA0A5A2 114 aa10.21□□□□□ -0.77
CHRNB4-205ENST00000560511 CYP2B6P20813 491 aa10.21□□□□□ -0.77
CHRNB4-205ENST00000560511 CAP2P40123 477 aa10.21□□□□□ -0.77
CHRNB4-205ENST00000560511 GCLCP48506 637 aaPredicted RBP10.21□□□□□ -0.77
CHRNB4-205ENST00000560511 SPP2Q13103 211 aa10.21□□□□□ -0.77
CHRNB4-205ENST00000560511 PABPC4Q13310 644 aaKnown RBP eCLIP10.21□□□□□ -0.77
CHRNB4-205ENST00000560511 SLFNL1Q499Z3 407 aa10.21□□□□□ -0.77
CHRNB4-205ENST00000560511 TSHZ3Q63HK5 1081 aa10.21□□□□□ -0.77
CHRNB4-205ENST00000560511 GPATCH3Q96I76 525 aa10.21□□□□□ -0.77
CHRNB4-205ENST00000560511 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.21□□□□□ -0.77
CHRNB4-205ENST00000560511 ECHDC1Q9NTX5 307 aa10.21□□□□□ -0.77
CHRNB4-205ENST00000560511 TRPC6Q9Y210 931 aa10.21□□□□□ -0.77
CHRNB4-205ENST00000560511 TTLL13PA6NNM8 815 aa10.2□□□□□ -0.78
CHRNB4-205ENST00000560511 GDF11O95390 407 aa10.2□□□□□ -0.78
CHRNB4-205ENST00000560511 CHGBP05060 677 aa10.2□□□□□ -0.78
CHRNB4-205ENST00000560511 ADD2P35612 726 aa10.2□□□□□ -0.78
CHRNB4-205ENST00000560511 PSEN1P49768 467 aa10.2□□□□□ -0.78
CHRNB4-205ENST00000560511 DOCK1Q14185 1865 aa10.2□□□□□ -0.78
CHRNB4-205ENST00000560511 SHROOM1Q2M3G4 852 aaPredicted RBP10.2□□□□□ -0.78
CHRNB4-205ENST00000560511 DNAH12Q6ZR08 3092 aa10.2□□□□□ -0.78
CHRNB4-205ENST00000560511 FOXP4Q8IVH2 680 aaPredicted RBP10.2□□□□□ -0.78
CHRNB4-205ENST00000560511 LCORLQ8N3X6 602 aa10.2□□□□□ -0.78
CHRNB4-205ENST00000560511 ZNF280CQ8ND82 737 aa10.2□□□□□ -0.78
CHRNB4-205ENST00000560511 CRNKL1Q9BZJ0 848 aaKnown RBP10.2□□□□□ -0.78
CHRNB4-205ENST00000560511 ARMT1Q9H993 441 aa10.2□□□□□ -0.78
CHRNB4-205ENST00000560511 GJD2Q9UKL4 321 aa10.2□□□□□ -0.78
CHRNB4-205ENST00000560511 USP17L5A8MUK1 530 aa10.19□□□□□ -0.78
CHRNB4-205ENST00000560511 MBD4O95243 580 aa10.19□□□□□ -0.78
CHRNB4-205ENST00000560511 ASNSP08243 561 aa10.19□□□□□ -0.78
CHRNB4-205ENST00000560511 HMGCS2P54868 508 aa10.19□□□□□ -0.78
CHRNB4-205ENST00000560511 JAG1P78504 1218 aa10.19□□□□□ -0.78
CHRNB4-205ENST00000560511 METTL16Q86W50 562 aaKnown RBP10.19□□□□□ -0.78
CHRNB4-205ENST00000560511 CCAR1Q8IX12 1150 aaKnown RBP10.19□□□□□ -0.78
CHRNB4-205ENST00000560511 PROCA1Q8NCQ7 364 aaPredicted RBP10.19□□□□□ -0.78
CHRNB4-205ENST00000560511 SDR42E1Q8WUS8 393 aa10.19□□□□□ -0.78
CHRNB4-205ENST00000560511 TRIB2Q92519 343 aa10.19□□□□□ -0.78
CHRNB4-205ENST00000560511 RNF25Q96BH1 459 aaPredicted RBP10.19□□□□□ -0.78
CHRNB4-205ENST00000560511 LBHD1Q9BQE6 289 aaPredicted RBP10.19□□□□□ -0.78
CHRNB4-205ENST00000560511 ASCC2Q9H1I8 757 aaPredicted RBP10.19□□□□□ -0.78
CHRNB4-205ENST00000560511 AS3MTQ9HBK9 375 aa10.19□□□□□ -0.78
CHRNB4-205ENST00000560511 SERPINB13Q9UIV8 391 aa10.19□□□□□ -0.78
CHRNB4-205ENST00000560511 OGDHLQ9ULD0 1010 aa10.19□□□□□ -0.78
CHRNB4-205ENST00000560511 ZBTB21Q9ULJ3 1066 aa10.19□□□□□ -0.78
CHRNB4-205ENST00000560511 DDX60LQ5H9U9 1706 aaKnown RBP10.19□□□□□ -0.78
CHRNB4-205ENST00000560511 PFASO15067 1338 aa10.18□□□□□ -0.78
CHRNB4-205ENST00000560511 PRKAB2O43741 272 aa10.18□□□□□ -0.78
CHRNB4-205ENST00000560511 POLR3DP05423 398 aaPredicted RBP10.18□□□□□ -0.78
CHRNB4-205ENST00000560511 PLCD1P51178 756 aa10.18□□□□□ -0.78
CHRNB4-205ENST00000560511 IRX3P78415 501 aaPredicted RBP10.18□□□□□ -0.78
CHRNB4-205ENST00000560511 UBE3CQ15386 1083 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms