RNA–Protein interactions for RNA: ENST00000560417.5

MARK3-220, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 3

Gene MARK3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-220ENST00000560417 COL17A1Q9UMD9 1497 aaPredicted RBP8.42□□□□□ -1.06
MARK3-220ENST00000560417 FAM181BA6NEQ2 426 aa8.41□□□□□ -1.06
MARK3-220ENST00000560417 DYNC1LI2O43237 492 aaPredicted RBP8.41□□□□□ -1.06
MARK3-220ENST00000560417 BMP3P12645 472 aa8.41□□□□□ -1.06
MARK3-220ENST00000560417 RASGRF1Q13972 1273 aa8.41□□□□□ -1.06
MARK3-220ENST00000560417 MRM1Q6IN84 353 aaKnown RBP8.41□□□□□ -1.06
MARK3-220ENST00000560417 CD163Q86VB7 1156 aa8.41□□□□□ -1.06
MARK3-220ENST00000560417 FAM20CQ8IXL6 584 aa8.41□□□□□ -1.06
MARK3-220ENST00000560417 FAM178BQ8IXR5 827 aa8.41□□□□□ -1.06
MARK3-220ENST00000560417 BAHD1Q8TBE0 780 aaPredicted RBP8.41□□□□□ -1.06
MARK3-220ENST00000560417 KLHL6Q8WZ60 621 aa8.41□□□□□ -1.06
MARK3-220ENST00000560417 UTP4Q969X6 686 aaKnown RBP8.41□□□□□ -1.06
MARK3-220ENST00000560417 MRFAP1L1Q96HT8 127 aa8.41□□□□□ -1.06
MARK3-220ENST00000560417 YIPF2Q9BWQ6 316 aa8.41□□□□□ -1.06
MARK3-220ENST00000560417 DAGLAQ9Y4D2 1042 aa8.41□□□□□ -1.06
MARK3-220ENST00000560417 B2RBV5 119 aa8.4□□□□□ -1.06
MARK3-220ENST00000560417 RNF225M0QZC1 329 aaPredicted RBP8.4□□□□□ -1.06
MARK3-220ENST00000560417 PDPK1O15530 556 aa8.4□□□□□ -1.06
MARK3-220ENST00000560417 MAP4P27816 1152 aaKnown RBP8.4□□□□□ -1.06
MARK3-220ENST00000560417 MAP7Q14244 749 aa8.4□□□□□ -1.06
MARK3-220ENST00000560417 DNAJB8Q8NHS0 232 aa8.4□□□□□ -1.06
MARK3-220ENST00000560417 VWCEQ96DN2 955 aa8.4□□□□□ -1.06
MARK3-220ENST00000560417 DCAF5Q96JK2 942 aa8.4□□□□□ -1.06
MARK3-220ENST00000560417 SLC6A18Q96N87 628 aa8.4□□□□□ -1.06
MARK3-220ENST00000560417 C1GALT1Q9NS00 363 aa8.4□□□□□ -1.06
MARK3-220ENST00000560417 DDAH1O94760 285 aa8.39□□□□□ -1.07
MARK3-220ENST00000560417 GBP1P32455 592 aa8.39□□□□□ -1.07
MARK3-220ENST00000560417 PMS1P54277 932 aaKnown RBP8.39□□□□□ -1.07
MARK3-220ENST00000560417 VHLLQ6RSH7 139 aa8.39□□□□□ -1.07
MARK3-220ENST00000560417 JAZF1Q86VZ6 243 aa8.39□□□□□ -1.07
MARK3-220ENST00000560417 PPFIBP1Q86W92 1011 aa8.39□□□□□ -1.07
MARK3-220ENST00000560417 XAGE3Q8WTP9 111 aa8.39□□□□□ -1.07
MARK3-220ENST00000560417 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.39□□□□□ -1.07
MARK3-220ENST00000560417 SUCOQ9UBS9 1254 aaKnown RBP8.39□□□□□ -1.07
MARK3-220ENST00000560417 PCDHB10Q9UN67 800 aa8.39□□□□□ -1.07
MARK3-220ENST00000560417 CEP131Q9UPN4 1083 aa8.39□□□□□ -1.07
MARK3-220ENST00000560417 FAM86C2PA6NEL3 165 aa8.38□□□□□ -1.07
MARK3-220ENST00000560417 C1QTNF9BB2RNN3 333 aa8.38□□□□□ -1.07
MARK3-220ENST00000560417 SLITRK5O94991 958 aa8.38□□□□□ -1.07
MARK3-220ENST00000560417 NCAPHQ15003 741 aa8.38□□□□□ -1.07
MARK3-220ENST00000560417 FAM177A1Q8N128 213 aaPredicted RBP8.38□□□□□ -1.07
MARK3-220ENST00000560417 NLGN1Q8N2Q7 840 aa8.38□□□□□ -1.07
MARK3-220ENST00000560417 RIN3Q8TB24 985 aa8.38□□□□□ -1.07
MARK3-220ENST00000560417 DHRS1Q96LJ7 313 aa8.38□□□□□ -1.07
MARK3-220ENST00000560417 TMA7Q9Y2S6 64 aaKnown RBP8.38□□□□□ -1.07
MARK3-220ENST00000560417 FAM95CA0A1B0GW59 222 aa8.37□□□□□ -1.07
MARK3-220ENST00000560417 GSK3AP49840 483 aa8.37□□□□□ -1.07
MARK3-220ENST00000560417 SLC7A5Q01650 507 aa8.37□□□□□ -1.07
MARK3-220ENST00000560417 LETMD1Q6P1Q0 360 aa8.37□□□□□ -1.07
MARK3-220ENST00000560417 ST13P5Q8NFI4 369 aaPredicted RBP8.37□□□□□ -1.07
MARK3-220ENST00000560417 CCDC85CA6NKD9 419 aa8.36□□□□□ -1.07
MARK3-220ENST00000560417 C9IYK1 514 aa8.36□□□□□ -1.07
MARK3-220ENST00000560417 BBS9Q3SYG4 887 aa8.36□□□□□ -1.07
MARK3-220ENST00000560417 GNPTABQ3T906 1256 aa8.36□□□□□ -1.07
MARK3-220ENST00000560417 KIAA1211LQ6NV74 962 aa8.36□□□□□ -1.07
MARK3-220ENST00000560417 ZNF669Q96BR6 464 aaPredicted RBP8.36□□□□□ -1.07
MARK3-220ENST00000560417 MIPEPQ99797 713 aa8.36□□□□□ -1.07
MARK3-220ENST00000560417 FAM83CQ9BQN1 747 aa8.36□□□□□ -1.07
MARK3-220ENST00000560417 LGR6Q9HBX8 967 aa8.36□□□□□ -1.07
MARK3-220ENST00000560417 PRDM10Q9NQV6 1147 aa8.36□□□□□ -1.07
MARK3-220ENST00000560417 STK17AQ9UEE5 414 aa8.36□□□□□ -1.07
MARK3-220ENST00000560417 DHX15O43143 795 aaKnown RBP8.35□□□□□ -1.07
MARK3-220ENST00000560417 CLEC3AO75596 197 aa8.35□□□□□ -1.07
MARK3-220ENST00000560417 RXRBP28702 533 aa8.35□□□□□ -1.07
MARK3-220ENST00000560417 BEND4Q6ZU67 534 aa8.35□□□□□ -1.07
MARK3-220ENST00000560417 CLEC10AQ8IUN9 316 aa8.35□□□□□ -1.07
MARK3-220ENST00000560417 LILRB2Q8N423 598 aa8.35□□□□□ -1.07
MARK3-220ENST00000560417 JMYQ8N9B5 988 aa8.35□□□□□ -1.07
MARK3-220ENST00000560417 GATA6Q92908 595 aa8.35□□□□□ -1.07
MARK3-220ENST00000560417 SMARCC1Q92922 1105 aaPredicted RBP8.35□□□□□ -1.07
MARK3-220ENST00000560417 RNPC3Q96LT9 517 aaKnown RBP8.35□□□□□ -1.07
MARK3-220ENST00000560417 DNAJC7Q99615 494 aa8.35□□□□□ -1.07
MARK3-220ENST00000560417 MRPL42Q9Y6G3 142 aaKnown RBP8.35□□□□□ -1.07
MARK3-220ENST00000560417 EOMESO95936 686 aa8.34□□□□□ -1.07
MARK3-220ENST00000560417 KCNMA1Q12791 1236 aa8.34□□□□□ -1.07
MARK3-220ENST00000560417 CDK5R2Q13319 367 aa8.34□□□□□ -1.07
MARK3-220ENST00000560417 NBPF12Q5TAG4 269 aaPredicted RBP8.34□□□□□ -1.07
MARK3-220ENST00000560417 SDE2Q6IQ49 451 aa8.34□□□□□ -1.07
MARK3-220ENST00000560417 EEPD1Q7L9B9 569 aa8.34□□□□□ -1.07
MARK3-220ENST00000560417 CDH24Q86UP0 819 aa8.34□□□□□ -1.07
MARK3-220ENST00000560417 KREMEN1Q96MU8 473 aa8.34□□□□□ -1.07
MARK3-220ENST00000560417 DUSP23Q9BVJ7 150 aa8.34□□□□□ -1.07
MARK3-220ENST00000560417 SUSD2Q9UGT4 822 aa8.34□□□□□ -1.07
MARK3-220ENST00000560417 SUSD5O60279 629 aa8.33□□□□□ -1.08
MARK3-220ENST00000560417 IFRD2Q12894 506 aaPredicted RBP8.33□□□□□ -1.08
MARK3-220ENST00000560417 NFKBIBQ15653 356 aa8.33□□□□□ -1.08
MARK3-220ENST00000560417 ANKRD39Q53RE8 183 aa8.33□□□□□ -1.08
MARK3-220ENST00000560417 AXDND1Q5T1B0 1012 aaPredicted RBP8.33□□□□□ -1.08
MARK3-220ENST00000560417 TDRD10Q5VZ19 366 aaKnown RBP8.33□□□□□ -1.08
MARK3-220ENST00000560417 PAOXQ6QHF9 649 aa8.33□□□□□ -1.08
MARK3-220ENST00000560417 SPATC1Q76KD6 591 aa8.33□□□□□ -1.08
MARK3-220ENST00000560417 FAM214BQ7L5A3 538 aa8.33□□□□□ -1.08
MARK3-220ENST00000560417 FBXL18Q96ME1 805 aa8.33□□□□□ -1.08
MARK3-220ENST00000560417 EPN3Q9H201 632 aa8.33□□□□□ -1.08
MARK3-220ENST00000560417 KCNF1Q9H3M0 494 aa8.33□□□□□ -1.08
MARK3-220ENST00000560417 CBFA2T2O43439 604 aa8.32□□□□□ -1.08
MARK3-220ENST00000560417 ITGB2P05107 769 aa8.32□□□□□ -1.08
MARK3-220ENST00000560417 GATA4P43694 442 aa8.32□□□□□ -1.08
MARK3-220ENST00000560417 ZNF143P52747 638 aaPredicted RBP8.32□□□□□ -1.08
MARK3-220ENST00000560417 MTERF2Q49AM1 385 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms