RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 TSPY3P0CV98 308 aa30.27■■■□□ 2.44
SMAD6-202ENST00000557916 TSPY8P0CW00 308 aa30.27■■■□□ 2.44
SMAD6-202ENST00000557916 BACE1P56817 501 aa30.27■■■□□ 2.44
SMAD6-202ENST00000557916 TFAP4Q01664 338 aa30.27■■■□□ 2.44
SMAD6-202ENST00000557916 MTMR2Q13614 643 aa30.27■■■□□ 2.44
SMAD6-202ENST00000557916 MOGSQ13724 837 aa30.27■■■□□ 2.44
SMAD6-202ENST00000557916 RRP12Q5JTH9 1297 aaKnown RBP30.27■■■□□ 2.44
SMAD6-202ENST00000557916 OTUD7BQ6GQQ9 843 aa30.27■■■□□ 2.44
SMAD6-202ENST00000557916 FASTKD5Q7L8L6 764 aaKnown RBP30.27■■■□□ 2.44
SMAD6-202ENST00000557916 CLEC10AQ8IUN9 316 aa30.27■■■□□ 2.44
SMAD6-202ENST00000557916 KANSL2Q9H9L4 492 aa30.27■■■□□ 2.44
SMAD6-202ENST00000557916 RANBP6O60518 1105 aaKnown RBP30.26■■■□□ 2.43
SMAD6-202ENST00000557916 HMGCS2P54868 508 aa30.26■■■□□ 2.43
SMAD6-202ENST00000557916 ICA1Q05084 483 aa30.26■■■□□ 2.43
SMAD6-202ENST00000557916 GADL1Q6ZQY3 521 aa30.26■■■□□ 2.43
SMAD6-202ENST00000557916 ACER1Q8TDN7 264 aa30.26■■■□□ 2.43
SMAD6-202ENST00000557916 FEZ1Q99689 392 aa30.26■■■□□ 2.43
SMAD6-202ENST00000557916 TSPY2A6NKD2 308 aa30.25■■■□□ 2.43
SMAD6-202ENST00000557916 C19orf81C9J6K1 198 aa30.25■■■□□ 2.43
SMAD6-202ENST00000557916 SH3D19Q5HYK7 790 aa30.25■■■□□ 2.43
SMAD6-202ENST00000557916 NEDD1Q8NHV4 660 aa30.25■■■□□ 2.43
SMAD6-202ENST00000557916 RNF186Q9NXI6 227 aa30.25■■■□□ 2.43
SMAD6-202ENST00000557916 BTBD19C9JJ37 291 aa30.24■■■□□ 2.43
SMAD6-202ENST00000557916 CYP21A2P08686 494 aa30.24■■■□□ 2.43
SMAD6-202ENST00000557916 FAM43AQ8N2R8 423 aa30.24■■■□□ 2.43
SMAD6-202ENST00000557916 LAMA4Q16363 1823 aa30.24■■■□□ 2.43
SMAD6-202ENST00000557916 TRPA1O75762 1119 aa30.23■■■□□ 2.43
SMAD6-202ENST00000557916 ALDH1A1P00352 501 aa30.23■■■□□ 2.43
SMAD6-202ENST00000557916 SIAH1Q8IUQ4 282 aa30.23■■■□□ 2.43
SMAD6-202ENST00000557916 ARHGEF10LQ9HCE6 1279 aa30.23■■■□□ 2.43
SMAD6-202ENST00000557916 NEDD4P46934 1319 aa30.23■■■□□ 2.43
SMAD6-202ENST00000557916 PLIN4Q96Q06 1357 aa30.22■■■□□ 2.43
SMAD6-202ENST00000557916 IGKV6D-41A0A0C4DH26 115 aa30.22■■■□□ 2.43
SMAD6-202ENST00000557916 HSPA1AP0DMV8 641 aaKnown RBP30.22■■■□□ 2.43
SMAD6-202ENST00000557916 HSPA1BP0DMV9 641 aaKnown RBP30.22■■■□□ 2.43
SMAD6-202ENST00000557916 EEF2P13639 858 aaKnown RBP30.22■■■□□ 2.43
SMAD6-202ENST00000557916 ATP2B2Q01814 1243 aa30.22■■■□□ 2.43
SMAD6-202ENST00000557916 DGKZQ13574 1117 aa30.22■■■□□ 2.43
SMAD6-202ENST00000557916 ANKRD23Q86SG2 305 aa30.22■■■□□ 2.43
SMAD6-202ENST00000557916 PROCA1Q8NCQ7 364 aaPredicted RBP30.22■■■□□ 2.43
SMAD6-202ENST00000557916 KIAA1683Q9H0B3 1180 aa30.22■■■□□ 2.43
SMAD6-202ENST00000557916 TMOD4Q9NZQ9 345 aa30.22■■■□□ 2.43
SMAD6-202ENST00000557916 A0A1W2PRG0 241 aa30.22■■■□□ 2.43
SMAD6-202ENST00000557916 CA12O43570 354 aa30.22■■■□□ 2.43
SMAD6-202ENST00000557916 USP14P54578 494 aa30.22■■■□□ 2.43
SMAD6-202ENST00000557916 ZYXQ15942 572 aaKnown RBP30.22■■■□□ 2.43
SMAD6-202ENST00000557916 GPAT2Q6NUI2 795 aa30.22■■■□□ 2.43
SMAD6-202ENST00000557916 USP17L2Q6R6M4 530 aa30.22■■■□□ 2.43
SMAD6-202ENST00000557916 ESR2Q92731 530 aa30.21■■■□□ 2.43
SMAD6-202ENST00000557916 CEP95Q96GE4 821 aa30.21■■■□□ 2.43
SMAD6-202ENST00000557916 SH2D4AQ9H788 454 aa30.21■■■□□ 2.43
SMAD6-202ENST00000557916 EMILIN3Q9NT22 766 aa30.21■■■□□ 2.43
SMAD6-202ENST00000557916 SAGE1Q9NXZ1 904 aa30.21■■■□□ 2.43
SMAD6-202ENST00000557916 PTPRFP10586 1907 aa30.21■■■□□ 2.43
SMAD6-202ENST00000557916 GREB1LQ9C091 1923 aaPredicted RBP30.2■■■□□ 2.43
SMAD6-202ENST00000557916 REC8O95072 547 aa30.2■■■□□ 2.42
SMAD6-202ENST00000557916 CNNM2Q9H8M5 875 aa30.2■■■□□ 2.42
SMAD6-202ENST00000557916 ZCCHC17Q9NP64 241 aaKnown RBP30.2■■■□□ 2.42
SMAD6-202ENST00000557916 MTMR4Q9NYA4 1195 aa30.2■■■□□ 2.42
SMAD6-202ENST00000557916 NYAP2Q9P242 653 aa30.2■■■□□ 2.42
SMAD6-202ENST00000557916 TMX2Q9Y320 296 aa30.2■■■□□ 2.42
SMAD6-202ENST00000557916 PDHXO00330 501 aa30.19■■■□□ 2.42
SMAD6-202ENST00000557916 NT5C2P49902 561 aa30.19■■■□□ 2.42
SMAD6-202ENST00000557916 NECTIN1Q15223 517 aa30.19■■■□□ 2.42
SMAD6-202ENST00000557916 TREML2Q5T2D2 321 aa30.19■■■□□ 2.42
SMAD6-202ENST00000557916 KRT23Q9C075 422 aa30.19■■■□□ 2.42
SMAD6-202ENST00000557916 AGTPBP1Q9UPW5 1226 aa30.19■■■□□ 2.42
SMAD6-202ENST00000557916 SLC27A2O14975 620 aa30.18■■■□□ 2.42
SMAD6-202ENST00000557916 CREB3L3Q68CJ9 461 aa30.18■■■□□ 2.42
SMAD6-202ENST00000557916 NKX2-3Q8TAU0 364 aa30.18■■■□□ 2.42
SMAD6-202ENST00000557916 IL17RBQ9NRM6 502 aa30.18■■■□□ 2.42
SMAD6-202ENST00000557916 CLIP2Q9UDT6 1046 aa30.18■■■□□ 2.42
SMAD6-202ENST00000557916 TAF6LQ9Y6J9 622 aa30.18■■■□□ 2.42
SMAD6-202ENST00000557916 B4E1Z4 1266 aa30.17■■■□□ 2.42
SMAD6-202ENST00000557916 KDM4AO75164 1064 aa30.17■■■□□ 2.42
SMAD6-202ENST00000557916 TTLL1O95922 423 aa30.17■■■□□ 2.42
SMAD6-202ENST00000557916 TAF1CQ15572 869 aaPredicted RBP30.17■■■□□ 2.42
SMAD6-202ENST00000557916 C12orf42Q96LP6 360 aa30.17■■■□□ 2.42
SMAD6-202ENST00000557916 E7EWF7 191 aa30.16■■■□□ 2.42
SMAD6-202ENST00000557916 FOXN1O15353 648 aa30.16■■■□□ 2.42
SMAD6-202ENST00000557916 NMT2O60551 498 aa30.16■■■□□ 2.42
SMAD6-202ENST00000557916 TRDNQ13061 729 aa30.16■■■□□ 2.42
SMAD6-202ENST00000557916 PPP4R3BQ5MIZ7 849 aa30.16■■■□□ 2.42
SMAD6-202ENST00000557916 TSKSQ9UJT2 592 aa30.16■■■□□ 2.42
SMAD6-202ENST00000557916 SLC45A1Q9Y2W3 748 aa30.16■■■□□ 2.42
SMAD6-202ENST00000557916 TBC1D8O95759 1140 aa30.15■■■□□ 2.42
SMAD6-202ENST00000557916 RNF20Q5VTR2 975 aa30.15■■■□□ 2.42
SMAD6-202ENST00000557916 TCP11L1Q9NUJ3 509 aa30.15■■■□□ 2.42
SMAD6-202ENST00000557916 PABPC4Q13310 644 aaKnown RBP eCLIP30.14■■■□□ 2.42
SMAD6-202ENST00000557916 CRHR2Q13324 411 aa30.14■■■□□ 2.42
SMAD6-202ENST00000557916 STOX1Q6ZVD7 989 aa30.14■■■□□ 2.42
SMAD6-202ENST00000557916 MKL1Q969V6 931 aa30.14■■■□□ 2.42
SMAD6-202ENST00000557916 CFHR5Q9BXR6 569 aa30.14■■■□□ 2.42
SMAD6-202ENST00000557916 VCPKMTQ9H867 229 aa30.14■■■□□ 2.42
SMAD6-202ENST00000557916 ZFYVE28Q9HCC9 887 aa30.14■■■□□ 2.42
SMAD6-202ENST00000557916 STX8Q9UNK0 236 aa30.14■■■□□ 2.42
SMAD6-202ENST00000557916 LOC285556D6RIA3 1793 aa30.14■■■□□ 2.42
SMAD6-202ENST00000557916 GOPCQ9HD26 462 aa30.13■■■□□ 2.41
SMAD6-202ENST00000557916 ZSWIM5Q9P217 1185 aa30.13■■■□□ 2.41
SMAD6-202ENST00000557916 VCAM1P19320 739 aa30.13■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms