RNA–Protein interactions for RNA: ENST00000556607.1

SPTLC2-205, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 3

Gene SPTLC2, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-205ENST00000556607 USP17L20D6RJB6 530 aa12.75□□□□□ -0.37
SPTLC2-205ENST00000556607 SLC34A2O95436 690 aa12.75□□□□□ -0.37
SPTLC2-205ENST00000556607 SGPL1O95470 568 aa12.75□□□□□ -0.37
SPTLC2-205ENST00000556607 CYP2D6P10635 497 aa12.75□□□□□ -0.37
SPTLC2-205ENST00000556607 SHMT1P34896 483 aa12.75□□□□□ -0.37
SPTLC2-205ENST00000556607 USP17L24Q0WX57 530 aa12.75□□□□□ -0.37
SPTLC2-205ENST00000556607 KIAA0100Q14667 2235 aaKnown RBP12.75□□□□□ -0.37
SPTLC2-205ENST00000556607 SEPT2Q15019 361 aa12.75□□□□□ -0.37
SPTLC2-205ENST00000556607 ACER1Q8TDN7 264 aa12.75□□□□□ -0.37
SPTLC2-205ENST00000556607 GTF3C2Q8WUA4 911 aaPredicted RBP12.75□□□□□ -0.37
SPTLC2-205ENST00000556607 SHISA4Q96DD7 197 aa12.75□□□□□ -0.37
SPTLC2-205ENST00000556607 DEFB118Q96PH6 123 aa12.75□□□□□ -0.37
SPTLC2-205ENST00000556607 NUDT12Q9BQG2 462 aa12.75□□□□□ -0.37
SPTLC2-205ENST00000556607 TXNRD2Q9NNW7 524 aa12.75□□□□□ -0.37
SPTLC2-205ENST00000556607 MORF4L1Q9UBU8 362 aa12.75□□□□□ -0.37
SPTLC2-205ENST00000556607 PLXNB2O15031 1838 aa12.74□□□□□ -0.37
SPTLC2-205ENST00000556607 PRKAB2O43741 272 aa12.74□□□□□ -0.37
SPTLC2-205ENST00000556607 ERVK-9P63128 1117 aa12.74□□□□□ -0.37
SPTLC2-205ENST00000556607 ERVK-24P63145 666 aa12.74□□□□□ -0.37
SPTLC2-205ENST00000556607 EVX2Q03828 476 aa12.74□□□□□ -0.37
SPTLC2-205ENST00000556607 Q3C1V9 767 aa12.74□□□□□ -0.37
SPTLC2-205ENST00000556607 DYNLL2Q96FJ2 89 aa12.74□□□□□ -0.37
SPTLC2-205ENST00000556607 HTATIP2Q9BUP3 242 aa12.74□□□□□ -0.37
SPTLC2-205ENST00000556607 ATP8A2Q9NTI2 1148 aa12.74□□□□□ -0.37
SPTLC2-205ENST00000556607 ECHDC1Q9NTX5 307 aa12.74□□□□□ -0.37
SPTLC2-205ENST00000556607 RBPJLQ9UBG7 517 aa12.74□□□□□ -0.37
SPTLC2-205ENST00000556607 SLC4A4Q9Y6R1 1079 aa12.74□□□□□ -0.37
SPTLC2-205ENST00000556607 BRCA2P51587 3418 aa12.74□□□□□ -0.37
SPTLC2-205ENST00000556607 PDE4DIPQ5VU43 2346 aa12.73□□□□□ -0.37
SPTLC2-205ENST00000556607 FARP2O94887 1054 aaPredicted RBP12.73□□□□□ -0.37
SPTLC2-205ENST00000556607 HMGCRP04035 888 aa12.73□□□□□ -0.37
SPTLC2-205ENST00000556607 CHGBP05060 677 aa12.73□□□□□ -0.37
SPTLC2-205ENST00000556607 VCAM1P19320 739 aa12.73□□□□□ -0.37
SPTLC2-205ENST00000556607 MAPK4P31152 587 aa12.73□□□□□ -0.37
SPTLC2-205ENST00000556607 CCNA1P78396 465 aa12.73□□□□□ -0.37
SPTLC2-205ENST00000556607 UBE3CQ15386 1083 aa12.73□□□□□ -0.37
SPTLC2-205ENST00000556607 SAMD1Q6SPF0 538 aaPredicted RBP12.73□□□□□ -0.37
SPTLC2-205ENST00000556607 CATSPERGQ6ZRH7 1159 aa12.73□□□□□ -0.37
SPTLC2-205ENST00000556607 SLC44A5Q8NCS7 719 aa12.73□□□□□ -0.37
SPTLC2-205ENST00000556607 C12orf42Q96LP6 360 aa12.73□□□□□ -0.37
SPTLC2-205ENST00000556607 KIAA1683Q9H0B3 1180 aa12.73□□□□□ -0.37
SPTLC2-205ENST00000556607 RPAP3Q9H6T3 665 aaPredicted RBP12.73□□□□□ -0.37
SPTLC2-205ENST00000556607 HMX1Q9NP08 348 aaPredicted RBP12.73□□□□□ -0.37
SPTLC2-205ENST00000556607 SWAP70Q9UH65 585 aa12.73□□□□□ -0.37
SPTLC2-205ENST00000556607 RAD21O60216 631 aa12.72□□□□□ -0.37
SPTLC2-205ENST00000556607 GUCY1A2P33402 732 aa12.72□□□□□ -0.37
SPTLC2-205ENST00000556607 ATP2B2Q01814 1243 aa12.72□□□□□ -0.37
SPTLC2-205ENST00000556607 GABPAQ06546 454 aa12.72□□□□□ -0.37
SPTLC2-205ENST00000556607 TSHZ3Q63HK5 1081 aa12.72□□□□□ -0.37
SPTLC2-205ENST00000556607 TMEM179Q6ZVK1 233 aa12.72□□□□□ -0.37
SPTLC2-205ENST00000556607 GPR142Q7Z601 462 aa12.72□□□□□ -0.37
SPTLC2-205ENST00000556607 STK11IPQ8N1F8 1099 aa12.72□□□□□ -0.37
SPTLC2-205ENST00000556607 SOCS4Q8WXH5 440 aa12.72□□□□□ -0.37
SPTLC2-205ENST00000556607 YTHDC1Q96MU7 727 aaKnown RBP12.72□□□□□ -0.37
SPTLC2-205ENST00000556607 TANGO6Q9C0B7 1094 aa12.72□□□□□ -0.37
SPTLC2-205ENST00000556607 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.72□□□□□ -0.37
SPTLC2-205ENST00000556607 DCTPP1Q9H773 170 aa12.72□□□□□ -0.37
SPTLC2-205ENST00000556607 ARHGEF10LQ9HCE6 1279 aa12.72□□□□□ -0.37
SPTLC2-205ENST00000556607 ZBTB47Q9UFB7 747 aaPredicted RBP12.72□□□□□ -0.37
SPTLC2-205ENST00000556607 GJD2Q9UKL4 321 aa12.72□□□□□ -0.37
SPTLC2-205ENST00000556607 RPTORQ8N122 1335 aa12.71□□□□□ -0.37
SPTLC2-205ENST00000556607 MKI67P46013 3256 aaKnown RBP12.71□□□□□ -0.37
SPTLC2-205ENST00000556607 CYP2D7A0A087X1C5 515 aa12.71□□□□□ -0.37
SPTLC2-205ENST00000556607 USP17L12C9JPN9 530 aa12.71□□□□□ -0.37
SPTLC2-205ENST00000556607 USP17L21D6R901 530 aa12.71□□□□□ -0.37
SPTLC2-205ENST00000556607 GLRX3O76003 335 aaKnown RBP12.71□□□□□ -0.37
SPTLC2-205ENST00000556607 ZKSCAN1P17029 563 aaPredicted RBP12.71□□□□□ -0.37
SPTLC2-205ENST00000556607 RGS2P41220 211 aa12.71□□□□□ -0.37
SPTLC2-205ENST00000556607 TRIM32Q13049 653 aa12.71□□□□□ -0.37
SPTLC2-205ENST00000556607 HABP4Q5JVS0 413 aaKnown RBP12.71□□□□□ -0.37
SPTLC2-205ENST00000556607 PLEKHH3Q7Z736 793 aa12.71□□□□□ -0.37
SPTLC2-205ENST00000556607 TRIB2Q92519 343 aa12.71□□□□□ -0.37
SPTLC2-205ENST00000556607 PUS7LQ9H0K6 701 aaKnown RBP12.71□□□□□ -0.37
SPTLC2-205ENST00000556607 PORCNQ9H237 461 aa12.71□□□□□ -0.37
SPTLC2-205ENST00000556607 RABGAP1Q9Y3P9 1069 aa12.71□□□□□ -0.37
SPTLC2-205ENST00000556607 IVNS1ABPQ9Y6Y0 642 aa12.71□□□□□ -0.37
SPTLC2-205ENST00000556607 A0A1W2PRG0 241 aa12.7□□□□□ -0.38
SPTLC2-205ENST00000556607 H0YGN5 161 aa12.7□□□□□ -0.38
SPTLC2-205ENST00000556607 AKR1B1P15121 316 aa12.7□□□□□ -0.38
SPTLC2-205ENST00000556607 CDK8P49336 464 aa12.7□□□□□ -0.38
SPTLC2-205ENST00000556607 ICA1Q05084 483 aa12.7□□□□□ -0.38
SPTLC2-205ENST00000556607 SH2D4AQ9H788 454 aa12.7□□□□□ -0.38
SPTLC2-205ENST00000556607 PAK6Q9NQU5 681 aaPredicted RBP12.7□□□□□ -0.38
SPTLC2-205ENST00000556607 EVI5O60447 810 aa12.69□□□□□ -0.38
SPTLC2-205ENST00000556607 APPP05067 770 aa12.69□□□□□ -0.38
SPTLC2-205ENST00000556607 PRKAR2AP13861 404 aaKnown RBP12.69□□□□□ -0.38
SPTLC2-205ENST00000556607 PLS1Q14651 629 aa12.69□□□□□ -0.38
SPTLC2-205ENST00000556607 COG2Q14746 738 aa12.69□□□□□ -0.38
SPTLC2-205ENST00000556607 C12orf60Q5U649 245 aa12.69□□□□□ -0.38
SPTLC2-205ENST00000556607 CTR9Q6PD62 1173 aa12.69□□□□□ -0.38
SPTLC2-205ENST00000556607 CLEC10AQ8IUN9 316 aa12.69□□□□□ -0.38
SPTLC2-205ENST00000556607 TRMT44Q8IYL2 757 aaKnown RBP12.69□□□□□ -0.38
SPTLC2-205ENST00000556607 SPICE1Q8N0Z3 855 aa12.69□□□□□ -0.38
SPTLC2-205ENST00000556607 KBTBD3Q8NAB2 608 aa12.69□□□□□ -0.38
SPTLC2-205ENST00000556607 CCDC17Q96LX7 622 aa12.69□□□□□ -0.38
SPTLC2-205ENST00000556607 HOXC10Q9NYD6 342 aa12.69□□□□□ -0.38
SPTLC2-205ENST00000556607 COLQQ9Y215 455 aaPredicted RBP12.69□□□□□ -0.38
SPTLC2-205ENST00000556607 NR2E3Q9Y5X4 410 aa12.69□□□□□ -0.38
SPTLC2-205ENST00000556607 SPDYE16A6NNV3 312 aaPredicted RBP12.68□□□□□ -0.38
SPTLC2-205ENST00000556607 MINDY4BA8MYZ0 360 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms