RNA–Protein interactions for RNA: ENST00000555573.5

KTN1-223, Transcript of kinectin 1, human

TSL 2 BASIC

Gene KTN1, Length 1,712 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KTN1-223	ENST00000555573	CCDC74B	Q96LY2	380 aa		7.05	□□□□□ -1.28
KTN1-223	ENST00000555573	PCDHB10	Q9UN67	800 aa		7.05	□□□□□ -1.28
KTN1-223	ENST00000555573	MSRB2	Q9Y3D2	182 aa		7.05	□□□□□ -1.28
KTN1-223	ENST00000555573	RGS13	O14921	159 aa		7.04	□□□□□ -1.28
KTN1-223	ENST00000555573	DDAH1	O94760	285 aa		7.04	□□□□□ -1.28
KTN1-223	ENST00000555573	GJB6	O95452	261 aa		7.04	□□□□□ -1.28
KTN1-223	ENST00000555573	MAP4	P27816	1152 aa	Known RBP	7.04	□□□□□ -1.28
KTN1-223	ENST00000555573	CD163	Q86VB7	1156 aa		7.04	□□□□□ -1.28
KTN1-223	ENST00000555573	FAM20C	Q8IXL6	584 aa		7.04	□□□□□ -1.28
KTN1-223	ENST00000555573	DCAF5	Q96JK2	942 aa		7.04	□□□□□ -1.28
KTN1-223	ENST00000555573	DEPDC7	Q96QD5	511 aa		7.04	□□□□□ -1.28
KTN1-223	ENST00000555573	YIPF2	Q9BWQ6	316 aa		7.04	□□□□□ -1.28
KTN1-223	ENST00000555573	SLC12A7	Q9Y666	1083 aa		7.04	□□□□□ -1.28
KTN1-223	ENST00000555573	RXRB	P28702	533 aa		7.04	□□□□□ -1.28
KTN1-223	ENST00000555573	FAM178B	Q8IXR5	827 aa		7.04	□□□□□ -1.28
KTN1-223	ENST00000555573	TMEM192	Q8IY95	271 aa		7.04	□□□□□ -1.28
KTN1-223	ENST00000555573	MRFAP1L1	Q96HT8	127 aa		7.04	□□□□□ -1.28
KTN1-223	ENST00000555573	SLC6A18	Q96N87	628 aa		7.04	□□□□□ -1.28
KTN1-223	ENST00000555573	PHAX	Q9H814	394 aa	Known RBP	7.04	□□□□□ -1.28
KTN1-223	ENST00000555573	C1QTNF9B	B2RNN3	333 aa		7.03	□□□□□ -1.28
KTN1-223	ENST00000555573	GBP1	P32455	592 aa		7.03	□□□□□ -1.28
KTN1-223	ENST00000555573	CCNF	P41002	786 aa		7.03	□□□□□ -1.28
KTN1-223	ENST00000555573	MRM1	Q6IN84	353 aa	Known RBP	7.03	□□□□□ -1.28
KTN1-223	ENST00000555573	ZNF746	Q6NUN9	644 aa	Predicted RBP	7.03	□□□□□ -1.28
KTN1-223	ENST00000555573	VHLL	Q6RSH7	139 aa		7.03	□□□□□ -1.28
KTN1-223	ENST00000555573	SEZ6L2	Q6UXD5	910 aa		7.03	□□□□□ -1.28
KTN1-223	ENST00000555573	MFSD2A	Q8NA29	543 aa		7.03	□□□□□ -1.28
KTN1-223	ENST00000555573	PPP1R13L	Q8WUF5	828 aa		7.03	□□□□□ -1.28
KTN1-223	ENST00000555573	SSBP4	Q9BWG4	385 aa	Predicted RBP	7.03	□□□□□ -1.28
KTN1-223	ENST00000555573	RNF225	M0QZC1	329 aa	Predicted RBP	7.02	□□□□□ -1.29
KTN1-223	ENST00000555573	CDK5R2	Q13319	367 aa		7.02	□□□□□ -1.29
KTN1-223	ENST00000555573	MAP7	Q14244	749 aa		7.02	□□□□□ -1.29
KTN1-223	ENST00000555573	RIN3	Q8TB24	985 aa		7.02	□□□□□ -1.29
KTN1-223	ENST00000555573	KLHL6	Q8WZ60	621 aa		7.02	□□□□□ -1.29
KTN1-223	ENST00000555573	MIPEP	Q99797	713 aa		7.02	□□□□□ -1.29
KTN1-223	ENST00000555573	CCDC113	Q9H0I3	377 aa		7.02	□□□□□ -1.29
KTN1-223	ENST00000555573	KCNF1	Q9H3M0	494 aa		7.02	□□□□□ -1.29
KTN1-223	ENST00000555573	ZNF214	Q9UL59	606 aa	Predicted RBP	7.02	□□□□□ -1.29
KTN1-223	ENST00000555573	FAM95C	A0A1B0GW59	222 aa		7.01	□□□□□ -1.29
KTN1-223	ENST00000555573	LRP10	Q7Z4F1	713 aa		7.01	□□□□□ -1.29
KTN1-223	ENST00000555573	JAZF1	Q86VZ6	243 aa		7.01	□□□□□ -1.29
KTN1-223	ENST00000555573	C1GALT1	Q9NS00	363 aa		7.01	□□□□□ -1.29
KTN1-223	ENST00000555573	FAM86C1	Q9NVL1	165 aa		7.01	□□□□□ -1.29
KTN1-223	ENST00000555573	PDPK1	O15530	556 aa		7.01	□□□□□ -1.29
KTN1-223	ENST00000555573	SLITRK5	O94991	958 aa		7.01	□□□□□ -1.29
KTN1-223	ENST00000555573	NFKBIB	Q15653	356 aa		7.01	□□□□□ -1.29
KTN1-223	ENST00000555573	GNPTAB	Q3T906	1256 aa		7.01	□□□□□ -1.29
KTN1-223	ENST00000555573	TDRD10	Q5VZ19	366 aa	Known RBP	7.01	□□□□□ -1.29
KTN1-223	ENST00000555573	KIAA1211L	Q6NV74	962 aa		7.01	□□□□□ -1.29
KTN1-223	ENST00000555573	LETMD1	Q6P1Q0	360 aa		7.01	□□□□□ -1.29
KTN1-223	ENST00000555573	BEND4	Q6ZU67	534 aa		7.01	□□□□□ -1.29
KTN1-223	ENST00000555573	PPFIBP1	Q86W92	1011 aa		7.01	□□□□□ -1.29
KTN1-223	ENST00000555573	DNAJB8	Q8NHS0	232 aa		7.01	□□□□□ -1.29
KTN1-223	ENST00000555573	DHRS1	Q96LJ7	313 aa		7.01	□□□□□ -1.29
KTN1-223	ENST00000555573	SUCO	Q9UBS9	1254 aa	Known RBP	7.01	□□□□□ -1.29
KTN1-223	ENST00000555573	TBX22	Q9Y458	520 aa		7.01	□□□□□ -1.29
KTN1-223	ENST00000555573	TLDC2	A0PJX2	215 aa		7	□□□□□ -1.29
KTN1-223	ENST00000555573		C9IYK1	514 aa		7	□□□□□ -1.29
KTN1-223	ENST00000555573	RBAK-RBAKDN	I3L0D1	243 aa		7	□□□□□ -1.29
KTN1-223	ENST00000555573	CLEC3A	O75596	197 aa		7	□□□□□ -1.29
KTN1-223	ENST00000555573	PMS1	P54277	932 aa	Known RBP	7	□□□□□ -1.29
KTN1-223	ENST00000555573	SLC7A5	Q01650	507 aa		7	□□□□□ -1.29
KTN1-223	ENST00000555573	CDH24	Q86UP0	819 aa		7	□□□□□ -1.29
KTN1-223	ENST00000555573	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	7	□□□□□ -1.29
KTN1-223	ENST00000555573	PRDM10	Q9NQV6	1147 aa		7	□□□□□ -1.29
KTN1-223	ENST00000555573	CEP131	Q9UPN4	1083 aa		7	□□□□□ -1.29
KTN1-223	ENST00000555573	DHX15	O43143	795 aa	Known RBP	6.99	□□□□□ -1.29
KTN1-223	ENST00000555573	TP53	P04637	393 aa	Predicted RBP	6.99	□□□□□ -1.29
KTN1-223	ENST00000555573	RASGRF1	Q13972	1273 aa		6.99	□□□□□ -1.29
KTN1-223	ENST00000555573	NCAPH	Q15003	741 aa		6.99	□□□□□ -1.29
KTN1-223	ENST00000555573	FAM177A1	Q8N128	213 aa	Predicted RBP	6.99	□□□□□ -1.29
KTN1-223	ENST00000555573	ZNF512B	Q96KM6	892 aa	Predicted RBP	6.99	□□□□□ -1.29
KTN1-223	ENST00000555573	DNAJC7	Q99615	494 aa		6.99	□□□□□ -1.29
KTN1-223	ENST00000555573	TMA7	Q9Y2S6	64 aa	Known RBP	6.99	□□□□□ -1.29
KTN1-223	ENST00000555573	COL17A1	Q9UMD9	1497 aa	Predicted RBP	6.99	□□□□□ -1.29
KTN1-223	ENST00000555573	PAOX	Q6QHF9	649 aa		6.98	□□□□□ -1.29
KTN1-223	ENST00000555573	TOP6BL	Q8N6T0	577 aa		6.98	□□□□□ -1.29
KTN1-223	ENST00000555573	DUSP23	Q9BVJ7	150 aa		6.98	□□□□□ -1.29
KTN1-223	ENST00000555573	MRPL42	Q9Y6G3	142 aa	Known RBP	6.98	□□□□□ -1.29
KTN1-223	ENST00000555573	HMX2	A2RU54	273 aa		6.98	□□□□□ -1.29
KTN1-223	ENST00000555573	BTBD11	A6QL63	1104 aa		6.98	□□□□□ -1.29
KTN1-223	ENST00000555573	LEFTY1	O75610	366 aa		6.98	□□□□□ -1.29
KTN1-223	ENST00000555573	GSK3A	P49840	483 aa		6.98	□□□□□ -1.29
KTN1-223	ENST00000555573	BBS9	Q3SYG4	887 aa		6.98	□□□□□ -1.29
KTN1-223	ENST00000555573	NLGN1	Q8N2Q7	840 aa		6.98	□□□□□ -1.29
KTN1-223	ENST00000555573	KREMEN1	Q96MU8	473 aa		6.98	□□□□□ -1.29
KTN1-223	ENST00000555573	FAM83C	Q9BQN1	747 aa		6.98	□□□□□ -1.29
KTN1-223	ENST00000555573	CNTNAP4	Q9C0A0	1308 aa		6.97	□□□□□ -1.29
KTN1-223	ENST00000555573	GATA4	P43694	442 aa		6.97	□□□□□ -1.29
KTN1-223	ENST00000555573	IFRD2	Q12894	506 aa	Predicted RBP	6.97	□□□□□ -1.29
KTN1-223	ENST00000555573	MTERF2	Q49AM1	385 aa		6.97	□□□□□ -1.29
KTN1-223	ENST00000555573	AXDND1	Q5T1B0	1012 aa	Predicted RBP	6.97	□□□□□ -1.29
KTN1-223	ENST00000555573	SPATC1	Q76KD6	591 aa		6.97	□□□□□ -1.29
KTN1-223	ENST00000555573	EEPD1	Q7L9B9	569 aa		6.97	□□□□□ -1.29
KTN1-223	ENST00000555573	CLEC10A	Q8IUN9	316 aa		6.97	□□□□□ -1.29
KTN1-223	ENST00000555573	TP53INP1	Q96A56	240 aa		6.97	□□□□□ -1.29
KTN1-223	ENST00000555573	VWCE	Q96DN2	955 aa		6.97	□□□□□ -1.29
KTN1-223	ENST00000555573	CADPS	Q9ULU8	1353 aa		6.96	□□□□□ -1.29
KTN1-223	ENST00000555573	SUSD5	O60279	629 aa		6.96	□□□□□ -1.29
KTN1-223	ENST00000555573	EOMES	O95936	686 aa		6.96	□□□□□ -1.29

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