RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 ADAMTS10Q9H324 1103 aa7.29□□□□□ -1.24
SNX6-204ENST00000555541 GCM1Q9NP62 436 aa7.29□□□□□ -1.24
SNX6-204ENST00000555541 TPX2Q9ULW0 747 aaKnown RBP7.29□□□□□ -1.24
SNX6-204ENST00000555541 GFRA2O00451 464 aa7.28□□□□□ -1.24
SNX6-204ENST00000555541 TRIM13O60858 407 aa7.28□□□□□ -1.24
SNX6-204ENST00000555541 USP17L7P0C7H9 530 aa7.28□□□□□ -1.24
SNX6-204ENST00000555541 DBX2Q6ZNG2 339 aa7.28□□□□□ -1.24
SNX6-204ENST00000555541 SV2BQ7L1I2 683 aa7.28□□□□□ -1.24
SNX6-204ENST00000555541 ZCCHC4Q9H5U6 513 aa7.28□□□□□ -1.24
SNX6-204ENST00000555541 PICK1Q9NRD5 415 aa7.28□□□□□ -1.24
SNX6-204ENST00000555541 RTEL1Q9NZ71 1219 aa7.28□□□□□ -1.24
SNX6-204ENST00000555541 ZSWIM5Q9P217 1185 aa7.28□□□□□ -1.24
SNX6-204ENST00000555541 FAM8A1Q9UBU6 413 aa7.28□□□□□ -1.24
SNX6-204ENST00000555541 ADAMTS20P59510 1910 aa7.27□□□□□ -1.25
SNX6-204ENST00000555541 WASH4PA8MWX3 477 aa7.27□□□□□ -1.25
SNX6-204ENST00000555541 HK2P52789 917 aa7.27□□□□□ -1.25
SNX6-204ENST00000555541 SKOR2Q2VWA4 1001 aaPredicted RBP7.27□□□□□ -1.25
SNX6-204ENST00000555541 TMPRSS7Q7RTY8 843 aa7.27□□□□□ -1.25
SNX6-204ENST00000555541 ZSCAN29Q8IWY8 852 aaPredicted RBP7.27□□□□□ -1.25
SNX6-204ENST00000555541 MFSD2AQ8NA29 543 aa7.27□□□□□ -1.25
SNX6-204ENST00000555541 KRTAP9-8Q9BYQ0 159 aa7.27□□□□□ -1.25
SNX6-204ENST00000555541 SNCAIPQ9Y6H5 919 aa7.27□□□□□ -1.25
SNX6-204ENST00000555541 PRAMEF27A3QJZ7 478 aa7.26□□□□□ -1.25
SNX6-204ENST00000555541 PEX10O60683 326 aa7.26□□□□□ -1.25
SNX6-204ENST00000555541 P4HBP07237 508 aaKnown RBP7.26□□□□□ -1.25
SNX6-204ENST00000555541 SYN1P17600 705 aa7.26□□□□□ -1.25
SNX6-204ENST00000555541 GAB4Q2WGN9 574 aa7.26□□□□□ -1.25
SNX6-204ENST00000555541 LETMD1Q6P1Q0 360 aa7.26□□□□□ -1.25
SNX6-204ENST00000555541 GGNQ86UU5 652 aa7.26□□□□□ -1.25
SNX6-204ENST00000555541 IRF2BP1Q8IU81 584 aa7.26□□□□□ -1.25
SNX6-204ENST00000555541 XYLT2Q9H1B5 865 aa7.26□□□□□ -1.25
SNX6-204ENST00000555541 CST3P01034 146 aaPredicted RBP7.25□□□□□ -1.25
SNX6-204ENST00000555541 KIR3DL1P43629 444 aa7.25□□□□□ -1.25
SNX6-204ENST00000555541 TIGD5Q53EQ6 642 aa7.25□□□□□ -1.25
SNX6-204ENST00000555541 HDXQ7Z353 690 aa7.25□□□□□ -1.25
SNX6-204ENST00000555541 CXorf38Q8TB03 319 aa7.25□□□□□ -1.25
SNX6-204ENST00000555541 SPG7Q9UQ90 795 aa7.25□□□□□ -1.25
SNX6-204ENST00000555541 PCDHB5Q9Y5E4 795 aa7.25□□□□□ -1.25
SNX6-204ENST00000555541 SEMA7AO75326 666 aa7.24□□□□□ -1.25
SNX6-204ENST00000555541 CBX7O95931 251 aa7.24□□□□□ -1.25
SNX6-204ENST00000555541 NFIXQ14938 502 aa7.24□□□□□ -1.25
SNX6-204ENST00000555541 WIPI1Q5MNZ9 446 aaPredicted RBP7.24□□□□□ -1.25
SNX6-204ENST00000555541 TTBK2Q6IQ55 1244 aa7.24□□□□□ -1.25
SNX6-204ENST00000555541 HID1Q8IV36 788 aa7.24□□□□□ -1.25
SNX6-204ENST00000555541 DUSP15Q9H1R2 295 aaPredicted RBP7.24□□□□□ -1.25
SNX6-204ENST00000555541 RNF19AQ9NV58 838 aa7.24□□□□□ -1.25
SNX6-204ENST00000555541 IVNS1ABPQ9Y6Y0 642 aa7.24□□□□□ -1.25
SNX6-204ENST00000555541 ZGLP1P0C6A0 271 aa7.23□□□□□ -1.25
SNX6-204ENST00000555541 PRAMEF13Q5VWM6 474 aa7.23□□□□□ -1.25
SNX6-204ENST00000555541 PIWIL2Q8TC59 973 aaKnown RBP7.23□□□□□ -1.25
SNX6-204ENST00000555541 COX4I2Q96KJ9 171 aa7.23□□□□□ -1.25
SNX6-204ENST00000555541 Q96M66 194 aa7.23□□□□□ -1.25
SNX6-204ENST00000555541 C19orf44Q9H6X5 657 aa7.23□□□□□ -1.25
SNX6-204ENST00000555541 ZNF552Q9H707 407 aaPredicted RBP7.23□□□□□ -1.25
SNX6-204ENST00000555541 TEX51A0A1B0GUA7 166 aa7.22□□□□□ -1.25
SNX6-204ENST00000555541 GRK4P32298 578 aa7.22□□□□□ -1.25
SNX6-204ENST00000555541 RPS26P62854 115 aaKnown RBP7.22□□□□□ -1.25
SNX6-204ENST00000555541 ZNF746Q6NUN9 644 aaPredicted RBP7.22□□□□□ -1.25
SNX6-204ENST00000555541 PDZD8Q8NEN9 1154 aa7.22□□□□□ -1.25
SNX6-204ENST00000555541 TJP2Q9UDY2 1190 aa7.22□□□□□ -1.25
SNX6-204ENST00000555541 ETF1P62495 437 aaKnown RBP7.21□□□□□ -1.26
SNX6-204ENST00000555541 NR0B2Q15466 257 aa7.21□□□□□ -1.26
SNX6-204ENST00000555541 AGMOQ6ZNB7 445 aa7.21□□□□□ -1.26
SNX6-204ENST00000555541 FRMD6Q96NE9 622 aa7.21□□□□□ -1.26
SNX6-204ENST00000555541 TACC3Q9Y6A5 838 aa7.21□□□□□ -1.26
SNX6-204ENST00000555541 LDHBP07195 334 aaKnown RBP7.2□□□□□ -1.26
SNX6-204ENST00000555541 ATP2B2Q01814 1243 aa7.2□□□□□ -1.26
SNX6-204ENST00000555541 SEPT6Q14141 434 aa7.2□□□□□ -1.26
SNX6-204ENST00000555541 SSPNQ14714 243 aa7.2□□□□□ -1.26
SNX6-204ENST00000555541 TCERG1LQ5VWI1 586 aa7.2□□□□□ -1.26
SNX6-204ENST00000555541 CDH24Q86UP0 819 aa7.2□□□□□ -1.26
SNX6-204ENST00000555541 MRPL41Q8IXM3 137 aaKnown RBP7.2□□□□□ -1.26
SNX6-204ENST00000555541 LILRA2Q8N149 483 aa7.2□□□□□ -1.26
SNX6-204ENST00000555541 SHISA4Q96DD7 197 aa7.2□□□□□ -1.26
SNX6-204ENST00000555541 SLC6A17Q9H1V8 727 aa7.2□□□□□ -1.26
SNX6-204ENST00000555541 TTF2Q9UNY4 1162 aaKnown RBP7.2□□□□□ -1.26
SNX6-204ENST00000555541 YBX2Q9Y2T7 364 aaKnown RBP7.2□□□□□ -1.26
SNX6-204ENST00000555541 KCTD3Q9Y597 815 aa7.2□□□□□ -1.26
SNX6-204ENST00000555541 GNA15P30679 374 aa7.19□□□□□ -1.26
SNX6-204ENST00000555541 ZNF605Q86T29 641 aa7.19□□□□□ -1.26
SNX6-204ENST00000555541 CREG2Q8IUH2 290 aa7.19□□□□□ -1.26
SNX6-204ENST00000555541 XAGE3Q8WTP9 111 aa7.19□□□□□ -1.26
SNX6-204ENST00000555541 INTS4Q96HW7 963 aaKnown RBP7.19□□□□□ -1.26
SNX6-204ENST00000555541 SGPP1Q9BX95 441 aa7.19□□□□□ -1.26
SNX6-204ENST00000555541 CNOT6Q9ULM6 557 aaKnown RBP7.19□□□□□ -1.26
SNX6-204ENST00000555541 AK5Q9Y6K8 562 aa7.19□□□□□ -1.26
SNX6-204ENST00000555541 DNAJB8Q8NHS0 232 aa7.18□□□□□ -1.26
SNX6-204ENST00000555541 PPP1R13LQ8WUF5 828 aa7.18□□□□□ -1.26
SNX6-204ENST00000555541 CWC22Q9HCG8 908 aaKnown RBP7.18□□□□□ -1.26
SNX6-204ENST00000555541 EBF1Q9UH73 591 aa7.18□□□□□ -1.26
SNX6-204ENST00000555541 TFE3P19532 575 aaPredicted RBP7.17□□□□□ -1.26
SNX6-204ENST00000555541 EIF4BP23588 611 aaKnown RBP7.17□□□□□ -1.26
SNX6-204ENST00000555541 KCNA1Q09470 495 aa7.17□□□□□ -1.26
SNX6-204ENST00000555541 ZNF385BQ569K4 471 aa7.17□□□□□ -1.26
SNX6-204ENST00000555541 PRRT2Q7Z6L0 340 aaPredicted RBP7.17□□□□□ -1.26
SNX6-204ENST00000555541 OTOL1A6NHN0 477 aaPredicted RBP7.16□□□□□ -1.26
SNX6-204ENST00000555541 CYP7A1P22680 504 aa7.16□□□□□ -1.26
SNX6-204ENST00000555541 TPP2P29144 1249 aaPredicted RBP7.16□□□□□ -1.26
SNX6-204ENST00000555541 LIG3P49916 1009 aa7.16□□□□□ -1.26
SNX6-204ENST00000555541 CCDC85BQ15834 202 aaPredicted RBP7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms