RNA–Protein interactions for RNA: ENST00000554877.1

CCDC85C-202, Transcript of coiled-coil domain containing 85C, humanhuman

TSL 4

Gene CCDC85C, Length 543 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85C-202ENST00000554877 USP17L13C9JLJ4 530 aa14.82□□□□□ -0.04
CCDC85C-202ENST00000554877 USP17L12C9JPN9 530 aa14.82□□□□□ -0.04
CCDC85C-202ENST00000554877 USP17L11C9JVI0 530 aa14.82□□□□□ -0.04
CCDC85C-202ENST00000554877 USP17L21D6R901 530 aa14.82□□□□□ -0.04
CCDC85C-202ENST00000554877 USP17L18D6R9N7 530 aa14.82□□□□□ -0.04
CCDC85C-202ENST00000554877 USP17L22D6RA61 530 aa14.82□□□□□ -0.04
CCDC85C-202ENST00000554877 USP17L17D6RBQ6 530 aa14.82□□□□□ -0.04
CCDC85C-202ENST00000554877 USP17L19D6RCP7 530 aa14.82□□□□□ -0.04
CCDC85C-202ENST00000554877 USP17L20D6RJB6 530 aa14.82□□□□□ -0.04
CCDC85C-202ENST00000554877 SMIM22K7EJ46 135 aa14.82□□□□□ -0.04
CCDC85C-202ENST00000554877 TNRC18O15417 2968 aaPredicted RBP14.82□□□□□ -0.04
CCDC85C-202ENST00000554877 RAD21O60216 631 aa14.82□□□□□ -0.04
CCDC85C-202ENST00000554877 HOXA7P31268 230 aaPredicted RBP14.82□□□□□ -0.04
CCDC85C-202ENST00000554877 ATP2B2Q01814 1243 aa14.82□□□□□ -0.04
CCDC85C-202ENST00000554877 USP17L24Q0WX57 530 aa14.82□□□□□ -0.04
CCDC85C-202ENST00000554877 PUS7LQ9H0K6 701 aaKnown RBP14.82□□□□□ -0.04
CCDC85C-202ENST00000554877 RBPJLQ9UBG7 517 aa14.82□□□□□ -0.04
CCDC85C-202ENST00000554877 DDX60LQ5H9U9 1706 aaKnown RBP14.82□□□□□ -0.04
CCDC85C-202ENST00000554877 MYH1P12882 1939 aa14.82□□□□□ -0.04
CCDC85C-202ENST00000554877 PDE4DIPQ5VU43 2346 aa14.81□□□□□ -0.04
CCDC85C-202ENST00000554877 ATAD5Q96QE3 1844 aa14.81□□□□□ -0.04
CCDC85C-202ENST00000554877 GUCY1A2P33402 732 aa14.81□□□□□ -0.04
CCDC85C-202ENST00000554877 USP14P54578 494 aa14.81□□□□□ -0.04
CCDC85C-202ENST00000554877 UBE3CQ15386 1083 aa14.81□□□□□ -0.04
CCDC85C-202ENST00000554877 NKX2-3Q8TAU0 364 aa14.81□□□□□ -0.04
CCDC85C-202ENST00000554877 DEFB118Q96PH6 123 aa14.81□□□□□ -0.04
CCDC85C-202ENST00000554877 ATP8A2Q9NTI2 1148 aa14.81□□□□□ -0.04
CCDC85C-202ENST00000554877 APPP05067 770 aa14.8□□□□□ -0.04
CCDC85C-202ENST00000554877 GJB1P08034 283 aa14.8□□□□□ -0.04
CCDC85C-202ENST00000554877 AKR1B1P15121 316 aa14.8□□□□□ -0.04
CCDC85C-202ENST00000554877 GABPAQ06546 454 aa14.8□□□□□ -0.04
CCDC85C-202ENST00000554877 TRIM32Q13049 653 aa14.8□□□□□ -0.04
CCDC85C-202ENST00000554877 CLEC10AQ8IUN9 316 aa14.8□□□□□ -0.04
CCDC85C-202ENST00000554877 U2AF1L4Q8WU68 220 aaKnown RBP14.8□□□□□ -0.04
CCDC85C-202ENST00000554877 RPAP3Q9H6T3 665 aaPredicted RBP14.8□□□□□ -0.04
CCDC85C-202ENST00000554877 PTPRFP10586 1907 aa14.8□□□□□ -0.04
CCDC85C-202ENST00000554877 MINDY4BA8MYZ0 360 aa14.79□□□□□ -0.04
CCDC85C-202ENST00000554877 VCAM1P19320 739 aa14.79□□□□□ -0.04
CCDC85C-202ENST00000554877 GJA8P48165 433 aa14.79□□□□□ -0.04
CCDC85C-202ENST00000554877 CDK8P49336 464 aa14.79□□□□□ -0.04
CCDC85C-202ENST00000554877 ERVK-9P63128 1117 aa14.79□□□□□ -0.04
CCDC85C-202ENST00000554877 ERVK-24P63145 666 aa14.79□□□□□ -0.04
CCDC85C-202ENST00000554877 IRF5Q13568 498 aa14.79□□□□□ -0.04
CCDC85C-202ENST00000554877 ANKRD45Q5TZF3 282 aa14.79□□□□□ -0.04
CCDC85C-202ENST00000554877 CTR9Q6PD62 1173 aa14.79□□□□□ -0.04
CCDC85C-202ENST00000554877 CATSPERGQ6ZRH7 1159 aa14.79□□□□□ -0.04
CCDC85C-202ENST00000554877 SPICE1Q8N0Z3 855 aa14.79□□□□□ -0.04
CCDC85C-202ENST00000554877 OTUD7AQ8TE49 926 aaPredicted RBP14.79□□□□□ -0.04
CCDC85C-202ENST00000554877 PXYLP1Q8TE99 480 aa14.79□□□□□ -0.04
CCDC85C-202ENST00000554877 SHISA4Q96DD7 197 aa14.79□□□□□ -0.04
CCDC85C-202ENST00000554877 NUDT12Q9BQG2 462 aa14.79□□□□□ -0.04
CCDC85C-202ENST00000554877 TANGO6Q9C0B7 1094 aa14.79□□□□□ -0.04
CCDC85C-202ENST00000554877 KIAA1683Q9H0B3 1180 aa14.79□□□□□ -0.04
CCDC85C-202ENST00000554877 PORCNQ9H237 461 aa14.79□□□□□ -0.04
CCDC85C-202ENST00000554877 MORF4L1Q9UBU8 362 aa14.79□□□□□ -0.04
CCDC85C-202ENST00000554877 GJD2Q9UKL4 321 aa14.79□□□□□ -0.04
CCDC85C-202ENST00000554877 A0A1W2PRG0 241 aa14.78□□□□□ -0.04
CCDC85C-202ENST00000554877 RNF113AO15541 343 aaKnown RBP14.78□□□□□ -0.04
CCDC85C-202ENST00000554877 SGPL1O95470 568 aa14.78□□□□□ -0.04
CCDC85C-202ENST00000554877 MAPK4P31152 587 aa14.78□□□□□ -0.04
CCDC85C-202ENST00000554877 C12orf60Q5U649 245 aa14.78□□□□□ -0.04
CCDC85C-202ENST00000554877 PLEKHH3Q7Z736 793 aa14.78□□□□□ -0.04
CCDC85C-202ENST00000554877 SMC5Q8IY18 1101 aa14.78□□□□□ -0.04
CCDC85C-202ENST00000554877 SWAP70Q9UH65 585 aa14.78□□□□□ -0.04
CCDC85C-202ENST00000554877 FARP2O94887 1054 aaPredicted RBP14.77□□□□□ -0.05
CCDC85C-202ENST00000554877 IGHDP01880 384 aa14.77□□□□□ -0.05
CCDC85C-202ENST00000554877 PLS1Q14651 629 aa14.77□□□□□ -0.05
CCDC85C-202ENST00000554877 POTEEQ6S8J3 1075 aa14.77□□□□□ -0.05
CCDC85C-202ENST00000554877 TMEM179Q6ZVK1 233 aa14.77□□□□□ -0.05
CCDC85C-202ENST00000554877 GPR142Q7Z601 462 aa14.77□□□□□ -0.05
CCDC85C-202ENST00000554877 KBTBD3Q8NAB2 608 aa14.77□□□□□ -0.05
CCDC85C-202ENST00000554877 GTF3C2Q8WUA4 911 aaPredicted RBP14.77□□□□□ -0.05
CCDC85C-202ENST00000554877 OSBP2Q969R2 916 aa14.77□□□□□ -0.05
CCDC85C-202ENST00000554877 C12orf42Q96LP6 360 aa14.77□□□□□ -0.05
CCDC85C-202ENST00000554877 STRBPQ96SI9 672 aaKnown RBP14.77□□□□□ -0.05
CCDC85C-202ENST00000554877 ARHGEF10LQ9HCE6 1279 aa14.77□□□□□ -0.05
CCDC85C-202ENST00000554877 HTTP42858 3142 aa14.77□□□□□ -0.05
CCDC85C-202ENST00000554877 MGAMO43451 1857 aa14.76□□□□□ -0.05
CCDC85C-202ENST00000554877 ERC2O15083 957 aa14.76□□□□□ -0.05
CCDC85C-202ENST00000554877 CNMDO75829 334 aa14.76□□□□□ -0.05
CCDC85C-202ENST00000554877 HMGCRP04035 888 aa14.76□□□□□ -0.05
CCDC85C-202ENST00000554877 CCNA1P78396 465 aa14.76□□□□□ -0.05
CCDC85C-202ENST00000554877 ICA1Q05084 483 aa14.76□□□□□ -0.05
CCDC85C-202ENST00000554877 KIAA1755Q5JYT7 1200 aa14.76□□□□□ -0.05
CCDC85C-202ENST00000554877 FSD1Q9BTV5 496 aa14.76□□□□□ -0.05
CCDC85C-202ENST00000554877 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.76□□□□□ -0.059e-6■■□□□ 12
CCDC85C-202ENST00000554877 MKNK2Q9HBH9 465 aa14.76□□□□□ -0.05
CCDC85C-202ENST00000554877 HMX1Q9NP08 348 aaPredicted RBP14.76□□□□□ -0.05
CCDC85C-202ENST00000554877 BTBD7Q9P203 1132 aa14.76□□□□□ -0.05
CCDC85C-202ENST00000554877 RABGAP1Q9Y3P9 1069 aa14.76□□□□□ -0.05
CCDC85C-202ENST00000554877 H0YGN5 161 aa14.75□□□□□ -0.05
CCDC85C-202ENST00000554877 M0R2C6 588 aa14.75□□□□□ -0.05
CCDC85C-202ENST00000554877 TDO2P48775 406 aa14.75□□□□□ -0.05
CCDC85C-202ENST00000554877 COG2Q14746 738 aa14.75□□□□□ -0.05
CCDC85C-202ENST00000554877 CCL14Q16627 93 aa14.75□□□□□ -0.05
CCDC85C-202ENST00000554877 C16orf86Q6ZW13 317 aa14.75□□□□□ -0.05
CCDC85C-202ENST00000554877 PI4K2BQ8TCG2 481 aa14.75□□□□□ -0.05
CCDC85C-202ENST00000554877 TRIB2Q92519 343 aa14.75□□□□□ -0.05
CCDC85C-202ENST00000554877 APPBP2Q92624 585 aa14.75□□□□□ -0.05
CCDC85C-202ENST00000554877 SEC62Q99442 399 aaKnown RBP14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms