RNA–Protein interactions for RNA: ENST00000554444.5

TUBB3-206, Transcript of tubulin beta 3 class III, humanhuman

TSL 2 BASIC

Gene TUBB3, Length 1,978 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-206ENST00000554444 NAV1Q8NEY1 1877 aa18.36■□□□□ 0.53
TUBB3-206ENST00000554444 KIF28PB7ZC32 967 aa18.35■□□□□ 0.53
TUBB3-206ENST00000554444 U2AF2P26368 475 aaKnown RBP eCLIP18.35■□□□□ 0.53
TUBB3-206ENST00000554444 NFIAQ12857 509 aa18.35■□□□□ 0.53
TUBB3-206ENST00000554444 R3HDM1Q15032 1099 aaKnown RBP18.35■□□□□ 0.53
TUBB3-206ENST00000554444 TMTC3Q6ZXV5 915 aa18.35■□□□□ 0.53
TUBB3-206ENST00000554444 RNF214Q8ND24 703 aa18.35■□□□□ 0.53
TUBB3-206ENST00000554444 USP28Q96RU2 1077 aa18.35■□□□□ 0.53
TUBB3-206ENST00000554444 IDI2Q9BXS1 227 aa18.35■□□□□ 0.53
TUBB3-206ENST00000554444 NUP62CLQ9H1M0 184 aa18.35■□□□□ 0.53
TUBB3-206ENST00000554444 ZNF277Q9NRM2 450 aaPredicted RBP18.35■□□□□ 0.53
TUBB3-206ENST00000554444 ZNF646O15015 1829 aaPredicted RBP18.35■□□□□ 0.53
TUBB3-206ENST00000554444 PRPF3O43395 683 aaKnown RBP18.35■□□□□ 0.53
TUBB3-206ENST00000554444 NPM3O75607 178 aaKnown RBP18.35■□□□□ 0.53
TUBB3-206ENST00000554444 VIL1P09327 827 aaKnown RBP18.35■□□□□ 0.53
TUBB3-206ENST00000554444 PGBD1Q96JS3 809 aa18.35■□□□□ 0.53
TUBB3-206ENST00000554444 KAT14Q9H8E8 782 aa18.35■□□□□ 0.53
TUBB3-206ENST00000554444 PLEKHA8P1O95397 391 aa18.34■□□□□ 0.53
TUBB3-206ENST00000554444 LIG1P18858 919 aa18.34■□□□□ 0.53
TUBB3-206ENST00000554444 PKN1Q16512 942 aa18.34■□□□□ 0.53
TUBB3-206ENST00000554444 MAP3K11Q16584 847 aa18.34■□□□□ 0.53
TUBB3-206ENST00000554444 RBM43Q6ZSC3 357 aaKnown RBP18.34■□□□□ 0.53
TUBB3-206ENST00000554444 LARGE2Q8N3Y3 721 aa18.34■□□□□ 0.53
TUBB3-206ENST00000554444 SRBD1Q8N5C6 995 aaKnown RBP18.34■□□□□ 0.53
TUBB3-206ENST00000554444 PNMA1Q8ND90 353 aa18.34■□□□□ 0.53
TUBB3-206ENST00000554444 GMLQ99445 158 aa18.34■□□□□ 0.53
TUBB3-206ENST00000554444 RTEL1Q9NZ71 1219 aa18.34■□□□□ 0.53
TUBB3-206ENST00000554444 CCDC192P0DO97 292 aa18.33■□□□□ 0.53
TUBB3-206ENST00000554444 TRIM29Q14134 588 aa18.33■□□□□ 0.53
TUBB3-206ENST00000554444 MYSM1Q5VVJ2 828 aa18.33■□□□□ 0.53
TUBB3-206ENST00000554444 ZFPM1Q8IX07 1006 aa18.33■□□□□ 0.53
TUBB3-206ENST00000554444 CTCFLQ8NI51 663 aaPredicted RBP18.33■□□□□ 0.53
TUBB3-206ENST00000554444 UPF1Q92900 1129 aaKnown RBP eCLIP18.33■□□□□ 0.53
TUBB3-206ENST00000554444 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.33■□□□□ 0.53
TUBB3-206ENST00000554444 FTOQ9C0B1 505 aaKnown RBP eCLIP18.33■□□□□ 0.53
TUBB3-206ENST00000554444 SERPINB13Q9UIV8 391 aa18.33■□□□□ 0.53
TUBB3-206ENST00000554444 FOCADQ5VW36 1801 aa18.33■□□□□ 0.53
TUBB3-206ENST00000554444 ECM29Q5VYK3 1845 aa18.33■□□□□ 0.52
TUBB3-206ENST00000554444 DALRD3Q5D0E6 543 aaKnown RBP18.33■□□□□ 0.52
TUBB3-206ENST00000554444 RSBN1LQ6PCB5 846 aaPredicted RBP18.33■□□□□ 0.52
TUBB3-206ENST00000554444 ZSCAN30Q86W11 494 aa18.33■□□□□ 0.52
TUBB3-206ENST00000554444 TMEM47Q9BQJ4 181 aa18.33■□□□□ 0.52
TUBB3-206ENST00000554444 FAM198AQ9UFP1 575 aa18.33■□□□□ 0.52
TUBB3-206ENST00000554444 V9GY48 417 aaPredicted RBP18.33■□□□□ 0.52
TUBB3-206ENST00000554444 MMP1P03956 469 aa18.32■□□□□ 0.52
TUBB3-206ENST00000554444 RBM5P52756 815 aaKnown RBP eCLIP18.32■□□□□ 0.52
TUBB3-206ENST00000554444 EHD4Q9H223 541 aa18.32■□□□□ 0.52
TUBB3-206ENST00000554444 CLSTN2Q9H4D0 955 aa18.32■□□□□ 0.52
TUBB3-206ENST00000554444 DACT1Q9NYF0 836 aa18.32■□□□□ 0.52
TUBB3-206ENST00000554444 SWAP70Q9UH65 585 aa18.32■□□□□ 0.52
TUBB3-206ENST00000554444 CD2APQ9Y5K6 639 aa18.32■□□□□ 0.52
TUBB3-206ENST00000554444 MYO3BQ8WXR4 1341 aa18.32■□□□□ 0.52
TUBB3-206ENST00000554444 KIF5BP33176 963 aa18.31■□□□□ 0.52
TUBB3-206ENST00000554444 CEBPZQ03701 1054 aaKnown RBP18.31■□□□□ 0.52
TUBB3-206ENST00000554444 TPRNQ4KMQ1 711 aa18.31■□□□□ 0.52
TUBB3-206ENST00000554444 BICD2Q8TD16 824 aa18.31■□□□□ 0.52
TUBB3-206ENST00000554444 DHX36Q9H2U1 1008 aaKnown RBP18.31■□□□□ 0.52
TUBB3-206ENST00000554444 POLR3EQ9NVU0 708 aa18.31■□□□□ 0.52
TUBB3-206ENST00000554444 ZNRF3Q9ULT6 936 aa18.31■□□□□ 0.52
TUBB3-206ENST00000554444 COL4A5P29400 1685 aa18.31■□□□□ 0.52
TUBB3-206ENST00000554444 PSMD14O00487 310 aa18.31■□□□□ 0.52
TUBB3-206ENST00000554444 RAD17O75943 681 aa18.31■□□□□ 0.52
TUBB3-206ENST00000554444 AKAP17AQ02040 695 aaKnown RBP18.31■□□□□ 0.52
TUBB3-206ENST00000554444 LINC00301Q8NCQ3 95 aa18.31■□□□□ 0.52
TUBB3-206ENST00000554444 SHISA4Q96DD7 197 aa18.31■□□□□ 0.52
TUBB3-206ENST00000554444 PRMT6Q96LA8 375 aaPredicted RBP18.31■□□□□ 0.52
TUBB3-206ENST00000554444 TNMDQ9H2S6 317 aa18.31■□□□□ 0.52
TUBB3-206ENST00000554444 STX8Q9UNK0 236 aa18.31■□□□□ 0.52
TUBB3-206ENST00000554444 PLIN4Q96Q06 1357 aa18.31■□□□□ 0.52
TUBB3-206ENST00000554444 SHMT1P34896 483 aa18.3■□□□□ 0.52
TUBB3-206ENST00000554444 GRM4Q14833 912 aa18.3■□□□□ 0.52
TUBB3-206ENST00000554444 CFAP100Q494V2 611 aa18.3■□□□□ 0.52
TUBB3-206ENST00000554444 CEP95Q96GE4 821 aa18.3■□□□□ 0.52
TUBB3-206ENST00000554444 MAD2L2Q9UI95 211 aa18.3■□□□□ 0.52
TUBB3-206ENST00000554444 CNTNAP5Q8WYK1 1306 aa18.3■□□□□ 0.52
TUBB3-206ENST00000554444 MYH1P12882 1939 aa18.3■□□□□ 0.52
TUBB3-206ENST00000554444 ADAMTSL1Q8N6G6 1762 aa18.3■□□□□ 0.52
TUBB3-206ENST00000554444 IGKV6D-41A0A0C4DH26 115 aa18.3■□□□□ 0.52
TUBB3-206ENST00000554444 HLA-DOAP06340 250 aa18.3■□□□□ 0.52
TUBB3-206ENST00000554444 PTGER2P43116 358 aa18.3■□□□□ 0.52
TUBB3-206ENST00000554444 CACNB3P54284 484 aa18.3■□□□□ 0.52
TUBB3-206ENST00000554444 FOXP1Q9H334 677 aaPredicted RBP18.3■□□□□ 0.52
TUBB3-206ENST00000554444 CCDC39Q9UFE4 941 aa18.3■□□□□ 0.52
TUBB3-206ENST00000554444 TAOK2Q9UL54 1235 aa18.3■□□□□ 0.52
TUBB3-206ENST00000554444 KCNJ14Q9UNX9 436 aa18.3■□□□□ 0.52
TUBB3-206ENST00000554444 CLIC4Q9Y696 253 aa18.3■□□□□ 0.52
TUBB3-206ENST00000554444 PALM3A6NDB9 673 aaPredicted RBP18.29■□□□□ 0.52
TUBB3-206ENST00000554444 BTBD18B2RXH4 712 aa18.29■□□□□ 0.52
TUBB3-206ENST00000554444 YEATS4O95619 227 aa18.29■□□□□ 0.52
TUBB3-206ENST00000554444 SH3BP5LQ7L8J4 393 aa18.29■□□□□ 0.52
TUBB3-206ENST00000554444 STAG2Q8N3U4 1231 aa18.29■□□□□ 0.52
TUBB3-206ENST00000554444 TDRD3Q9H7E2 651 aaKnown RBP18.29■□□□□ 0.52
TUBB3-206ENST00000554444 MTMR4Q9NYA4 1195 aa18.29■□□□□ 0.52
TUBB3-206ENST00000554444 DDTLA6NHG4 134 aaPredicted RBP18.28■□□□□ 0.52
TUBB3-206ENST00000554444 TOP1P11387 765 aaKnown RBP18.28■□□□□ 0.52
TUBB3-206ENST00000554444 AKR1B1P15121 316 aa18.28■□□□□ 0.52
TUBB3-206ENST00000554444 GNAQP50148 359 aa18.28■□□□□ 0.52
TUBB3-206ENST00000554444 METTL16Q86W50 562 aaKnown RBP18.28■□□□□ 0.52
TUBB3-206ENST00000554444 NOSTRINQ8IVI9 506 aa18.28■□□□□ 0.52
TUBB3-206ENST00000554444 DIS3L2Q8IYB7 885 aaKnown RBP18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms