RNA–Protein interactions for RNA: ENST00000554040.5

ATXN3-224, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-224ENST00000554040 COA1Q9GZY4 146 aa8.91□□□□□ -0.98
ATXN3-224ENST00000554040 ZFYVE28Q9HCC9 887 aa8.91□□□□□ -0.98
ATXN3-224ENST00000554040 CHPF2Q9P2E5 772 aa8.91□□□□□ -0.98
ATXN3-224ENST00000554040 PPP2R3BQ9Y5P8 575 aa8.91□□□□□ -0.98
ATXN3-224ENST00000554040 COL4A1P02462 1669 aa8.91□□□□□ -0.98
ATXN3-224ENST00000554040 APBB1O00213 710 aa8.9□□□□□ -0.98
ATXN3-224ENST00000554040 USP2O75604 605 aaPredicted RBP8.9□□□□□ -0.98
ATXN3-224ENST00000554040 IREB2P48200 963 aaKnown RBP8.9□□□□□ -0.98
ATXN3-224ENST00000554040 CENPCQ03188 943 aa8.9□□□□□ -0.98
ATXN3-224ENST00000554040 KIAA0825Q8IV33 1275 aa8.9□□□□□ -0.98
ATXN3-224ENST00000554040 HTATIP2Q9BUP3 242 aa8.9□□□□□ -0.98
ATXN3-224ENST00000554040 NR2E3Q9Y5X4 410 aa8.9□□□□□ -0.98
ATXN3-224ENST00000554040 KDM3BQ7LBC6 1761 aa8.9□□□□□ -0.98
ATXN3-224ENST00000554040 RBBP6Q7Z6E9 1792 aaKnown RBP8.9□□□□□ -0.98
ATXN3-224ENST00000554040 VCANP13611 3396 aa8.9□□□□□ -0.99
ATXN3-224ENST00000554040 MED23Q9ULK4 1368 aa8.89□□□□□ -0.99
ATXN3-224ENST00000554040 SOX1O00570 391 aaPredicted RBP8.89□□□□□ -0.99
ATXN3-224ENST00000554040 ZBTB7BO15156 539 aaPredicted RBP8.89□□□□□ -0.99
ATXN3-224ENST00000554040 PDE8AO60658 829 aa8.89□□□□□ -0.99
ATXN3-224ENST00000554040 IRS1P35568 1242 aa8.89□□□□□ -0.99
ATXN3-224ENST00000554040 DLGAP5Q15398 846 aa8.89□□□□□ -0.99
ATXN3-224ENST00000554040 TAF1CQ15572 869 aaPredicted RBP8.89□□□□□ -0.99
ATXN3-224ENST00000554040 NBPF12Q5TAG4 269 aaPredicted RBP8.89□□□□□ -0.99
ATXN3-224ENST00000554040 TAS1R3Q7RTX0 852 aa8.89□□□□□ -0.99
ATXN3-224ENST00000554040 UBE2Q1Q7Z7E8 422 aa8.89□□□□□ -0.99
ATXN3-224ENST00000554040 ANKRD13AQ8IZ07 590 aa8.89□□□□□ -0.99
ATXN3-224ENST00000554040 SHISA4Q96DD7 197 aa8.89□□□□□ -0.99
ATXN3-224ENST00000554040 XAGE2Q96GT9 111 aa8.89□□□□□ -0.99
ATXN3-224ENST00000554040 PNNQ9H307 717 aaKnown RBP8.89□□□□□ -0.99
ATXN3-224ENST00000554040 TIMMDC1Q9NPL8 285 aa8.89□□□□□ -0.99
ATXN3-224ENST00000554040 MINPP1Q9UNW1 487 aa8.89□□□□□ -0.99
ATXN3-224ENST00000554040 UNC80Q8N2C7 3258 aa8.88□□□□□ -0.99
ATXN3-224ENST00000554040 LOC100996750A0A140TA64 210 aa8.88□□□□□ -0.99
ATXN3-224ENST00000554040 STAU1O95793 577 aaKnown RBP8.88□□□□□ -0.99
ATXN3-224ENST00000554040 CCT4P50991 539 aaKnown RBP8.88□□□□□ -0.99
ATXN3-224ENST00000554040 PRMT2P55345 433 aa8.88□□□□□ -0.99
ATXN3-224ENST00000554040 RIPK4P57078 832 aa8.88□□□□□ -0.99
ATXN3-224ENST00000554040 MTFR1Q15390 333 aa8.88□□□□□ -0.99
ATXN3-224ENST00000554040 KRT24Q2M2I5 525 aa8.88□□□□□ -0.99
ATXN3-224ENST00000554040 TXNRD3Q86VQ6 643 aa8.88□□□□□ -0.99
ATXN3-224ENST00000554040 BRI3BPQ8WY22 251 aa8.88□□□□□ -0.99
ATXN3-224ENST00000554040 ACDQ96AP0 544 aa8.88□□□□□ -0.99
ATXN3-224ENST00000554040 OPTNQ96CV9 577 aa8.88□□□□□ -0.99
ATXN3-224ENST00000554040 KRTAP4-6Q9BYQ5 205 aa8.88□□□□□ -0.99
ATXN3-224ENST00000554040 BSDC1Q9NW68 430 aaPredicted RBP8.88□□□□□ -0.99
ATXN3-224ENST00000554040 HYPKQ9NX55 129 aa8.88□□□□□ -0.99
ATXN3-224ENST00000554040 DBF4Q9UBU7 674 aaPredicted RBP8.88□□□□□ -0.99
ATXN3-224ENST00000554040 COL1A1P02452 1464 aaPredicted RBP8.88□□□□□ -0.99
ATXN3-224ENST00000554040 DDX60Q8IY21 1712 aaKnown RBP8.88□□□□□ -0.99
ATXN3-224ENST00000554040 ZNF804BA4D1E1 1349 aa8.87□□□□□ -0.99
ATXN3-224ENST00000554040 MAPK8IP3Q9UPT6 1336 aa8.87□□□□□ -0.99
ATXN3-224ENST00000554040 H7C1W4 665 aa8.87□□□□□ -0.99
ATXN3-224ENST00000554040 TLR2O60603 784 aa8.87□□□□□ -0.99
ATXN3-224ENST00000554040 F11P03951 625 aa8.87□□□□□ -0.99
ATXN3-224ENST00000554040 PCCAP05165 728 aaPredicted RBP8.87□□□□□ -0.99
ATXN3-224ENST00000554040 GJB1P08034 283 aa8.87□□□□□ -0.99
ATXN3-224ENST00000554040 GJA8P48165 433 aa8.87□□□□□ -0.99
ATXN3-224ENST00000554040 GTF2A2P52657 109 aa8.87□□□□□ -0.99
ATXN3-224ENST00000554040 GTF2IP78347 998 aa8.87□□□□□ -0.99
ATXN3-224ENST00000554040 LACTBP83111 547 aaPredicted RBP8.87□□□□□ -0.99
ATXN3-224ENST00000554040 UBAP2LQ14157 1087 aaKnown RBP8.87□□□□□ -0.99
ATXN3-224ENST00000554040 KIF22Q14807 665 aa8.87□□□□□ -0.99
ATXN3-224ENST00000554040 HDGFL1Q5TGJ6 251 aa8.87□□□□□ -0.99
ATXN3-224ENST00000554040 CCDC191Q8NCU4 936 aa8.87□□□□□ -0.99
ATXN3-224ENST00000554040 CDC5LQ99459 802 aaKnown RBP8.87□□□□□ -0.99
ATXN3-224ENST00000554040 PCGF6Q9BYE7 350 aa8.87□□□□□ -0.99
ATXN3-224ENST00000554040 ARHGAP39Q9C0H5 1083 aa8.87□□□□□ -0.99
ATXN3-224ENST00000554040 ELP3Q9H9T3 547 aa8.87□□□□□ -0.99
ATXN3-224ENST00000554040 LEMD3Q9Y2U8 911 aa8.87□□□□□ -0.99
ATXN3-224ENST00000554040 SSC5DA1L4H1 1573 aa8.86□□□□□ -0.99
ATXN3-224ENST00000554040 CCL15-CCL14A0A0B4J2E2 113 aa8.86□□□□□ -0.99
ATXN3-224ENST00000554040 CHL1O00533 1208 aa8.86□□□□□ -0.99
ATXN3-224ENST00000554040 MYO1BO43795 1136 aa8.86□□□□□ -0.99
ATXN3-224ENST00000554040 WDHD1O75717 1129 aaPredicted RBP8.86□□□□□ -0.99
ATXN3-224ENST00000554040 HOXB7P09629 217 aa8.86□□□□□ -0.99
ATXN3-224ENST00000554040 TRIM26Q12899 539 aaPredicted RBP8.86□□□□□ -0.99
ATXN3-224ENST00000554040 CCL15Q16663 113 aa8.86□□□□□ -0.99
ATXN3-224ENST00000554040 FAM43AQ8N2R8 423 aa8.86□□□□□ -0.99
ATXN3-224ENST00000554040 JARID2Q92833 1246 aaPredicted RBP8.86□□□□□ -0.99
ATXN3-224ENST00000554040 PRMT6Q96LA8 375 aaPredicted RBP8.86□□□□□ -0.99
ATXN3-224ENST00000554040 NUCKS1Q9H1E3 243 aaKnown RBP8.86□□□□□ -0.99
ATXN3-224ENST00000554040 STAP2Q9UGK3 403 aa8.86□□□□□ -0.99
ATXN3-224ENST00000554040 PCDHAC2Q9Y5I4 1007 aa8.86□□□□□ -0.99
ATXN3-224ENST00000554040 CLRN2A0PK11 232 aa8.85□□□□□ -0.99
ATXN3-224ENST00000554040 MARSP56192 900 aaKnown RBP8.85□□□□□ -0.99
ATXN3-224ENST00000554040 RASA3Q14644 834 aa8.85□□□□□ -0.99
ATXN3-224ENST00000554040 CFAP100Q494V2 611 aa8.85□□□□□ -0.99
ATXN3-224ENST00000554040 FOXR1Q6PIV2 292 aa8.85□□□□□ -0.99
ATXN3-224ENST00000554040 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.85□□□□□ -0.99
ATXN3-224ENST00000554040 MYD88Q99836 296 aa8.85□□□□□ -0.99
ATXN3-224ENST00000554040 VEZTQ9HBM0 779 aa8.85□□□□□ -0.99
ATXN3-224ENST00000554040 ETNK1Q9HBU6 452 aa8.85□□□□□ -0.99
ATXN3-224ENST00000554040 STXBP5LQ9Y2K9 1186 aa8.85□□□□□ -0.99
ATXN3-224ENST00000554040 CCL5P13501 91 aa8.84□□□□□ -0.99
ATXN3-224ENST00000554040 KLRK1P26718 216 aa8.84□□□□□ -0.99
ATXN3-224ENST00000554040 HOXD10P28358 340 aa8.84□□□□□ -0.99
ATXN3-224ENST00000554040 GRK4P32298 578 aa8.84□□□□□ -0.99
ATXN3-224ENST00000554040 PHKA2P46019 1235 aa8.84□□□□□ -0.99
ATXN3-224ENST00000554040 MAP3K10Q02779 954 aa8.84□□□□□ -0.99
ATXN3-224ENST00000554040 LMOD3Q0VAK6 560 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms