RNA–Protein interactions for RNA: ENST00000554026.5

IFT43-206, Transcript of intraflagellar transport 43, humanhuman

TSL 2

Gene IFT43, Length 1,102 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-206ENST00000554026 CCDC178Q5BJE1 867 aa13.35□□□□□ -0.27
IFT43-206ENST00000554026 SH3D19Q5HYK7 790 aa13.35□□□□□ -0.27
IFT43-206ENST00000554026 AKNAD1Q5T1N1 836 aa13.35□□□□□ -0.27
IFT43-206ENST00000554026 IFNL1Q8IU54 200 aa13.35□□□□□ -0.27
IFT43-206ENST00000554026 PROCA1Q8NCQ7 364 aaPredicted RBP13.35□□□□□ -0.27
IFT43-206ENST00000554026 FEZ1Q99689 392 aa13.35□□□□□ -0.27
IFT43-206ENST00000554026 ANO2Q9NQ90 1003 aa13.35□□□□□ -0.27
IFT43-206ENST00000554026 TMOD4Q9NZQ9 345 aa13.35□□□□□ -0.27
IFT43-206ENST00000554026 SYNPO2Q9UMS6 1093 aa13.35□□□□□ -0.27
IFT43-206ENST00000554026 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.35□□□□□ -0.27
IFT43-206ENST00000554026 SLC45A1Q9Y2W3 748 aa13.35□□□□□ -0.27
IFT43-206ENST00000554026 TRIM75PA6NK02 468 aa13.34□□□□□ -0.27
IFT43-206ENST00000554026 TSPY2A6NKD2 308 aa13.34□□□□□ -0.27
IFT43-206ENST00000554026 CCDC85CA6NKD9 419 aa13.34□□□□□ -0.27
IFT43-206ENST00000554026 AKR1B1P15121 316 aa13.34□□□□□ -0.27
IFT43-206ENST00000554026 ICA1Q05084 483 aa13.34□□□□□ -0.27
IFT43-206ENST00000554026 CTDSPL2Q05D32 466 aa13.34□□□□□ -0.27
IFT43-206ENST00000554026 TRDNQ13061 729 aa13.34□□□□□ -0.27
IFT43-206ENST00000554026 SEPT2Q15019 361 aa13.34□□□□□ -0.27
IFT43-206ENST00000554026 RNF20Q5VTR2 975 aa13.34□□□□□ -0.27
IFT43-206ENST00000554026 USP17L2Q6R6M4 530 aa13.34□□□□□ -0.27
IFT43-206ENST00000554026 ANKRD23Q86SG2 305 aa13.34□□□□□ -0.27
IFT43-206ENST00000554026 NEDD1Q8NHV4 660 aa13.34□□□□□ -0.27
IFT43-206ENST00000554026 ESR2Q92731 530 aa13.34□□□□□ -0.27
IFT43-206ENST00000554026 CFHR5Q9BXR6 569 aa13.34□□□□□ -0.27
IFT43-206ENST00000554026 KRT23Q9C075 422 aa13.34□□□□□ -0.27
IFT43-206ENST00000554026 KIAA1683Q9H0B3 1180 aa13.34□□□□□ -0.27
IFT43-206ENST00000554026 TOMM22Q9NS69 142 aa13.34□□□□□ -0.27
IFT43-206ENST00000554026 LAMA4Q16363 1823 aa13.34□□□□□ -0.27
IFT43-206ENST00000554026 PLIN4Q96Q06 1357 aa13.33□□□□□ -0.27
IFT43-206ENST00000554026 RANBP6O60518 1105 aaKnown RBP13.33□□□□□ -0.28
IFT43-206ENST00000554026 HAND2P61296 217 aa13.33□□□□□ -0.28
IFT43-206ENST00000554026 PTH1RQ03431 593 aa13.33□□□□□ -0.28
IFT43-206ENST00000554026 EVX2Q03828 476 aa13.33□□□□□ -0.28
IFT43-206ENST00000554026 STK11IPQ8N1F8 1099 aa13.33□□□□□ -0.28
IFT43-206ENST00000554026 BRI3BPQ8WY22 251 aa13.33□□□□□ -0.28
IFT43-206ENST00000554026 IL25Q9H293 177 aa13.33□□□□□ -0.28
IFT43-206ENST00000554026 NYAP2Q9P242 653 aa13.33□□□□□ -0.28
IFT43-206ENST00000554026 PNMA3Q9UL41 463 aa13.33□□□□□ -0.28
IFT43-206ENST00000554026 GTF3C3Q9Y5Q9 886 aa13.33□□□□□ -0.28
IFT43-206ENST00000554026 PHIPQ8WWQ0 1821 aa13.33□□□□□ -0.28
IFT43-206ENST00000554026 GUCY1A2P33402 732 aa13.32□□□□□ -0.28
IFT43-206ENST00000554026 JAG1P78504 1218 aa13.32□□□□□ -0.28
IFT43-206ENST00000554026 TFAP4Q01664 338 aa13.32□□□□□ -0.28
IFT43-206ENST00000554026 MTMR2Q13614 643 aa13.32□□□□□ -0.28
IFT43-206ENST00000554026 GADL1Q6ZQY3 521 aa13.32□□□□□ -0.28
IFT43-206ENST00000554026 LPAR1Q92633 364 aa13.32□□□□□ -0.28
IFT43-206ENST00000554026 C12orf42Q96LP6 360 aa13.32□□□□□ -0.28
IFT43-206ENST00000554026 ZIC5Q96T25 663 aa13.32□□□□□ -0.28
IFT43-206ENST00000554026 LSG1Q9H089 658 aaKnown RBP13.32□□□□□ -0.28
IFT43-206ENST00000554026 GOPCQ9HD26 462 aa13.32□□□□□ -0.28
IFT43-206ENST00000554026 TCP11L1Q9NUJ3 509 aa13.32□□□□□ -0.28
IFT43-206ENST00000554026 RNF186Q9NXI6 227 aa13.32□□□□□ -0.28
IFT43-206ENST00000554026 AGTPBP1Q9UPW5 1226 aa13.32□□□□□ -0.28
IFT43-206ENST00000554026 TMX2Q9Y320 296 aa13.32□□□□□ -0.28
IFT43-206ENST00000554026 RBM8AQ9Y5S9 174 aaKnown RBP13.32□□□□□ -0.28
IFT43-206ENST00000554026 SMIM22K7EJ46 135 aa13.31□□□□□ -0.28
IFT43-206ENST00000554026 PRDM1O75626 825 aa13.31□□□□□ -0.28
IFT43-206ENST00000554026 TTLL1O95922 423 aa13.31□□□□□ -0.28
IFT43-206ENST00000554026 ZKSCAN1P17029 563 aaPredicted RBP13.31□□□□□ -0.28
IFT43-206ENST00000554026 HMGCS2P54868 508 aa13.31□□□□□ -0.28
IFT43-206ENST00000554026 NOM1Q5C9Z4 860 aaKnown RBP13.31□□□□□ -0.28
IFT43-206ENST00000554026 RRP12Q5JTH9 1297 aaKnown RBP13.31□□□□□ -0.28
IFT43-206ENST00000554026 RALYLQ86SE5 291 aaKnown RBP13.31□□□□□ -0.28
IFT43-206ENST00000554026 IQCA1Q86XH1 822 aa13.31□□□□□ -0.28
IFT43-206ENST00000554026 TTC14Q96N46 770 aa13.31□□□□□ -0.28
IFT43-206ENST00000554026 PARK7Q99497 189 aaKnown RBP13.31□□□□□ -0.28
IFT43-206ENST00000554026 ZFYVE28Q9HCC9 887 aa13.31□□□□□ -0.28
IFT43-206ENST00000554026 MTMR4Q9NYA4 1195 aa13.31□□□□□ -0.28
IFT43-206ENST00000554026 IGKV6D-41A0A0C4DH26 115 aa13.3□□□□□ -0.28
IFT43-206ENST00000554026 BTBD19C9JJ37 291 aa13.3□□□□□ -0.28
IFT43-206ENST00000554026 PDHXO00330 501 aa13.3□□□□□ -0.28
IFT43-206ENST00000554026 IGF2BP3O00425 579 aaKnown RBP eCLIP13.3□□□□□ -0.28
IFT43-206ENST00000554026 TRPA1O75762 1119 aa13.3□□□□□ -0.28
IFT43-206ENST00000554026 CYP21A2P08686 494 aa13.3□□□□□ -0.28
IFT43-206ENST00000554026 EEF2P13639 858 aaKnown RBP13.3□□□□□ -0.28
IFT43-206ENST00000554026 OSBPP22059 807 aa13.3□□□□□ -0.28
IFT43-206ENST00000554026 MLLT1Q03111 559 aaPredicted RBP13.3□□□□□ -0.28
IFT43-206ENST00000554026 TAF1CQ15572 869 aaPredicted RBP13.3□□□□□ -0.28
IFT43-206ENST00000554026 CCDC84Q86UT8 332 aaPredicted RBP13.3□□□□□ -0.28
IFT43-206ENST00000554026 TBC1D10CQ8IV04 446 aa13.3□□□□□ -0.28
IFT43-206ENST00000554026 NCOA7Q8NI08 942 aa13.3□□□□□ -0.28
IFT43-206ENST00000554026 MKL1Q969V6 931 aa13.3□□□□□ -0.28
IFT43-206ENST00000554026 PTPN18Q99952 460 aa13.3□□□□□ -0.28
IFT43-206ENST00000554026 MCOLN1Q9GZU1 580 aa13.3□□□□□ -0.28
IFT43-206ENST00000554026 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.3□□□□□ -0.28
IFT43-206ENST00000554026 PTPRFP10586 1907 aa13.3□□□□□ -0.28
IFT43-206ENST00000554026 GREB1LQ9C091 1923 aaPredicted RBP13.3□□□□□ -0.28
IFT43-206ENST00000554026 MCCP23508 829 aa13.29□□□□□ -0.28
IFT43-206ENST00000554026 HOXA7P31268 230 aaPredicted RBP13.29□□□□□ -0.28
IFT43-206ENST00000554026 ATP2B2Q01814 1243 aa13.29□□□□□ -0.28
IFT43-206ENST00000554026 MOGSQ13724 837 aa13.29□□□□□ -0.28
IFT43-206ENST00000554026 KRT32Q14532 448 aa13.29□□□□□ -0.28
IFT43-206ENST00000554026 SART3Q15020 963 aaKnown RBP13.29□□□□□ -0.28
IFT43-206ENST00000554026 NECTIN1Q15223 517 aa13.29□□□□□ -0.28
IFT43-206ENST00000554026 SHROOM1Q2M3G4 852 aaPredicted RBP13.29□□□□□ -0.28
IFT43-206ENST00000554026 FAM47AQ5JRC9 791 aa13.29□□□□□ -0.28
IFT43-206ENST00000554026 FAM43AQ8N2R8 423 aa13.29□□□□□ -0.28
IFT43-206ENST00000554026 GTF3C2Q8WUA4 911 aaPredicted RBP13.29□□□□□ -0.28
IFT43-206ENST00000554026 CEP95Q96GE4 821 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms