RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 NOL10Q9BSC4 688 aaKnown RBP8.53□□□□□ -1.04
ATXN3-221ENST00000553498 STK36Q9NRP7 1315 aa8.53□□□□□ -1.04
ATXN3-221ENST00000553498 CCDC69A6NI79 296 aa8.52□□□□□ -1.05
ATXN3-221ENST00000553498 IFIT3O14879 490 aaKnown RBP8.52□□□□□ -1.05
ATXN3-221ENST00000553498 ZBTB43O43298 467 aa8.52□□□□□ -1.05
ATXN3-221ENST00000553498 CTDNEP1O95476 244 aa8.52□□□□□ -1.05
ATXN3-221ENST00000553498 LDHBP07195 334 aaKnown RBP8.52□□□□□ -1.05
ATXN3-221ENST00000553498 CALM1P0DP23 149 aa8.52□□□□□ -1.05
ATXN3-221ENST00000553498 CALM2P0DP24 149 aa8.52□□□□□ -1.05
ATXN3-221ENST00000553498 CALM3P0DP25 149 aa8.52□□□□□ -1.05
ATXN3-221ENST00000553498 METAP2P50579 478 aaKnown RBP eCLIP8.52□□□□□ -1.05
ATXN3-221ENST00000553498 MECOMQ03112 1051 aa8.52□□□□□ -1.05
ATXN3-221ENST00000553498 DDR1Q08345 913 aa8.52□□□□□ -1.05
ATXN3-221ENST00000553498 RESTQ13127 1097 aa8.52□□□□□ -1.05
ATXN3-221ENST00000553498 COL9A3Q14050 684 aaPredicted RBP8.52□□□□□ -1.05
ATXN3-221ENST00000553498 TMEM67Q5HYA8 995 aa8.52□□□□□ -1.05
ATXN3-221ENST00000553498 CCDC183Q5T5S1 534 aa8.52□□□□□ -1.05
ATXN3-221ENST00000553498 CAVIN1Q6NZI2 390 aaKnown RBP8.52□□□□□ -1.05
ATXN3-221ENST00000553498 TRIM67Q6ZTA4 783 aa8.52□□□□□ -1.05
ATXN3-221ENST00000553498 SMIM5Q71RC9 77 aa8.52□□□□□ -1.05
ATXN3-221ENST00000553498 CDC37L1Q7L3B6 337 aa8.52□□□□□ -1.05
ATXN3-221ENST00000553498 BRAPQ7Z569 592 aa8.52□□□□□ -1.05
ATXN3-221ENST00000553498 LRRC2Q9BYS8 371 aa8.52□□□□□ -1.05
ATXN3-221ENST00000553498 FAM117AQ9C073 453 aa8.52□□□□□ -1.05
ATXN3-221ENST00000553498 GRPEL1Q9HAV7 217 aa8.52□□□□□ -1.05
ATXN3-221ENST00000553498 ZNF287Q9HBT7 754 aa8.52□□□□□ -1.05
ATXN3-221ENST00000553498 LIMD1Q9UGP4 676 aa8.52□□□□□ -1.05
ATXN3-221ENST00000553498 ATP6V0A2Q9Y487 856 aa8.52□□□□□ -1.05
ATXN3-221ENST00000553498 SLC12A7Q9Y666 1083 aa8.52□□□□□ -1.05
ATXN3-221ENST00000553498 PARP3Q9Y6F1 533 aa8.52□□□□□ -1.05
ATXN3-221ENST00000553498 COL1A1P02452 1464 aaPredicted RBP8.51□□□□□ -1.05
ATXN3-221ENST00000553498 A0A0G2JLW4 131 aa8.51□□□□□ -1.05
ATXN3-221ENST00000553498 B4E1Z4 1266 aa8.51□□□□□ -1.05
ATXN3-221ENST00000553498 ORC4O43929 436 aa8.51□□□□□ -1.05
ATXN3-221ENST00000553498 JAK2O60674 1132 aa8.51□□□□□ -1.05
ATXN3-221ENST00000553498 JUNDP17535 347 aa8.51□□□□□ -1.05
ATXN3-221ENST00000553498 DNM1Q05193 864 aaKnown RBP8.51□□□□□ -1.05
ATXN3-221ENST00000553498 PDE4BQ07343 736 aa8.51□□□□□ -1.05
ATXN3-221ENST00000553498 WTAPQ15007 396 aa8.51□□□□□ -1.05
ATXN3-221ENST00000553498 FOXD4L5Q5VV16 416 aaPredicted RBP8.51□□□□□ -1.05
ATXN3-221ENST00000553498 APOA5Q6Q788 366 aa8.51□□□□□ -1.05
ATXN3-221ENST00000553498 LRSAM1Q6UWE0 723 aa8.51□□□□□ -1.05
ATXN3-221ENST00000553498 NFXL1Q6ZNB6 911 aa8.51□□□□□ -1.05
ATXN3-221ENST00000553498 CYB5R4Q7L1T6 521 aa8.51□□□□□ -1.05
ATXN3-221ENST00000553498 IQCA1Q86XH1 822 aa8.51□□□□□ -1.05
ATXN3-221ENST00000553498 MIGA1Q8NAN2 632 aa8.51□□□□□ -1.05
ATXN3-221ENST00000553498 FBXO18Q8NFZ0 1043 aa8.51□□□□□ -1.05
ATXN3-221ENST00000553498 FOXD4L4Q8WXT5 416 aaPredicted RBP8.51□□□□□ -1.05
ATXN3-221ENST00000553498 UBAC1Q9BSL1 405 aa8.51□□□□□ -1.05
ATXN3-221ENST00000553498 COA1Q9GZY4 146 aa8.51□□□□□ -1.05
ATXN3-221ENST00000553498 LY9Q9HBG7 655 aa8.51□□□□□ -1.05
ATXN3-221ENST00000553498 CD209Q9NNX6 404 aa8.51□□□□□ -1.05
ATXN3-221ENST00000553498 ZSWIM5Q9P217 1185 aa8.51□□□□□ -1.05
ATXN3-221ENST00000553498 BRPF3Q9ULD4 1205 aa8.51□□□□□ -1.05
ATXN3-221ENST00000553498 NSFL1CQ9UNZ2 370 aaKnown RBP8.51□□□□□ -1.05
ATXN3-221ENST00000553498 CNPY2Q9Y2B0 182 aa8.51□□□□□ -1.05
ATXN3-221ENST00000553498 TIAM2Q8IVF5 1701 aa8.51□□□□□ -1.05
ATXN3-221ENST00000553498 NEDD4P46934 1319 aa8.51□□□□□ -1.05
ATXN3-221ENST00000553498 FAM205AQ6ZU69 1335 aa8.51□□□□□ -1.05
ATXN3-221ENST00000553498 GOLGA6L4A6NEF3 574 aa8.5□□□□□ -1.05
ATXN3-221ENST00000553498 C6orf229H3BNL8 230 aa8.5□□□□□ -1.05
ATXN3-221ENST00000553498 UFL1O94874 794 aa8.5□□□□□ -1.05
ATXN3-221ENST00000553498 SRGNP10124 158 aa8.5□□□□□ -1.05
ATXN3-221ENST00000553498 IFNAR1P17181 557 aa8.5□□□□□ -1.05
ATXN3-221ENST00000553498 RPIAP49247 311 aa8.5□□□□□ -1.05
ATXN3-221ENST00000553498 CCT2P78371 535 aaKnown RBP8.5□□□□□ -1.05
ATXN3-221ENST00000553498 GPSM2P81274 684 aa8.5□□□□□ -1.05
ATXN3-221ENST00000553498 TUSC1Q2TAM9 212 aa8.5□□□□□ -1.05
ATXN3-221ENST00000553498 CHST3Q7LGC8 479 aa8.5□□□□□ -1.05
ATXN3-221ENST00000553498 ADGRA1Q86SQ6 560 aa8.5□□□□□ -1.05
ATXN3-221ENST00000553498 ZNF598Q86UK7 904 aaKnown RBP8.5□□□□□ -1.05
ATXN3-221ENST00000553498 COL23A1Q86Y22 540 aaPredicted RBP8.5□□□□□ -1.05
ATXN3-221ENST00000553498 TRIM22Q8IYM9 498 aa8.5□□□□□ -1.05
ATXN3-221ENST00000553498 TBC1D16Q8TBP0 767 aa8.5□□□□□ -1.05
ATXN3-221ENST00000553498 MASTLQ96GX5 879 aa8.5□□□□□ -1.05
ATXN3-221ENST00000553498 C8orf76Q96K31 380 aa8.5□□□□□ -1.05
ATXN3-221ENST00000553498 SPATA32Q96LK8 384 aa8.5□□□□□ -1.05
ATXN3-221ENST00000553498 EYA3Q99504 573 aa8.5□□□□□ -1.05
ATXN3-221ENST00000553498 DDX19AQ9NUU7 478 aaKnown RBP8.5□□□□□ -1.05
ATXN3-221ENST00000553498 RBM28Q9NW13 759 aaKnown RBP8.5□□□□□ -1.05
ATXN3-221ENST00000553498 ORC3Q9UBD5 711 aaPredicted RBP8.5□□□□□ -1.05
ATXN3-221ENST00000553498 NAP1L2Q9ULW6 460 aaPredicted RBP8.5□□□□□ -1.05
ATXN3-221ENST00000553498 IQSEC3Q9UPP2 1182 aaPredicted RBP8.5□□□□□ -1.05
ATXN3-221ENST00000553498 C4AP0C0L4 1744 aa8.49□□□□□ -1.05
ATXN3-221ENST00000553498 GOLGA8AA7E2F4 631 aa8.49□□□□□ -1.05
ATXN3-221ENST00000553498 FIBPO43427 364 aa8.49□□□□□ -1.05
ATXN3-221ENST00000553498 PRKAB2O43741 272 aa8.49□□□□□ -1.05
ATXN3-221ENST00000553498 DDAH1O94760 285 aa8.49□□□□□ -1.05
ATXN3-221ENST00000553498 XRCC6P12956 609 aaKnown RBP eCLIP8.49□□□□□ -1.05
ATXN3-221ENST00000553498 FDPSP14324 419 aaKnown RBP8.49□□□□□ -1.05
ATXN3-221ENST00000553498 KLRK1P26718 216 aa8.49□□□□□ -1.05
ATXN3-221ENST00000553498 PRDX5P30044 214 aa8.49□□□□□ -1.05
ATXN3-221ENST00000553498 IARSP41252 1262 aaKnown RBP8.49□□□□□ -1.05
ATXN3-221ENST00000553498 CHAF1AQ13111 956 aaPredicted RBP8.49□□□□□ -1.05
ATXN3-221ENST00000553498 MTMR2Q13614 643 aa8.49□□□□□ -1.05
ATXN3-221ENST00000553498 TRIM29Q14134 588 aa8.49□□□□□ -1.05
ATXN3-221ENST00000553498 ZNF827Q17R98 1081 aa8.49□□□□□ -1.05
ATXN3-221ENST00000553498 CC2D2BQ6DHV5 1058 aa8.49□□□□□ -1.05
ATXN3-221ENST00000553498 STYK1Q6J9G0 422 aa8.49□□□□□ -1.05
ATXN3-221ENST00000553498 CTR9Q6PD62 1173 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms