RNA–Protein interactions for RNA: ENST00000551301.1

SLC48A1-208, Transcript of solute carrier family 48 member 1, humanhuman

TSL 2

Gene SLC48A1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-208ENST00000551301 INHAP05111 366 aa24.43■■□□□ 1.5
SLC48A1-208ENST00000551301 GJA8P48165 433 aa24.43■■□□□ 1.5
SLC48A1-208ENST00000551301 GABPAQ06546 454 aa24.43■■□□□ 1.5
SLC48A1-208ENST00000551301 GCC1Q96CN9 775 aa24.43■■□□□ 1.5
SLC48A1-208ENST00000551301 MAPK4P31152 587 aa24.42■■□□□ 1.5
SLC48A1-208ENST00000551301 PAGR1Q9BTK6 254 aa24.42■■□□□ 1.5
SLC48A1-208ENST00000551301 SLC4A4Q9Y6R1 1079 aa24.42■■□□□ 1.5
SLC48A1-208ENST00000551301 DDX60LQ5H9U9 1706 aaKnown RBP24.41■■□□□ 1.5
SLC48A1-208ENST00000551301 RRP1P56182 461 aaKnown RBP24.41■■□□□ 1.5
SLC48A1-208ENST00000551301 CCNA1P78396 465 aa24.41■■□□□ 1.5
SLC48A1-208ENST00000551301 SEPT2Q15019 361 aa24.41■■□□□ 1.5
SLC48A1-208ENST00000551301 TMEM179Q6ZVK1 233 aa24.41■■□□□ 1.5
SLC48A1-208ENST00000551301 SOCS4Q8WXH5 440 aa24.41■■□□□ 1.5
SLC48A1-208ENST00000551301 UNC93B1Q9H1C4 597 aa24.41■■□□□ 1.5
SLC48A1-208ENST00000551301 MYH7P12883 1935 aa24.41■■□□□ 1.5
SLC48A1-208ENST00000551301 ERC2O15083 957 aa24.4■■□□□ 1.5
SLC48A1-208ENST00000551301 PRKAB2O43741 272 aa24.4■■□□□ 1.5
SLC48A1-208ENST00000551301 ZFYP08048 801 aaPredicted RBP24.4■■□□□ 1.5
SLC48A1-208ENST00000551301 ERVK-9P63128 1117 aa24.4■■□□□ 1.5
SLC48A1-208ENST00000551301 ERVK-24P63145 666 aa24.4■■□□□ 1.5
SLC48A1-208ENST00000551301 ACER1Q8TDN7 264 aa24.4■■□□□ 1.5
SLC48A1-208ENST00000551301 CCDC17Q96LX7 622 aa24.4■■□□□ 1.5
SLC48A1-208ENST00000551301 NUDT12Q9BQG2 462 aa24.4■■□□□ 1.5
SLC48A1-208ENST00000551301 SH2D4AQ9H788 454 aa24.4■■□□□ 1.5
SLC48A1-208ENST00000551301 RBPJLQ9UBG7 517 aa24.4■■□□□ 1.5
SLC48A1-208ENST00000551301 DOCK3Q8IZD9 2030 aa24.4■■□□□ 1.5
SLC48A1-208ENST00000551301 GLRX3O76003 335 aaKnown RBP24.39■■□□□ 1.49
SLC48A1-208ENST00000551301 HMGCRP04035 888 aa24.39■■□□□ 1.49
SLC48A1-208ENST00000551301 CYP2D6P10635 497 aa24.39■■□□□ 1.49
SLC48A1-208ENST00000551301 VCAM1P19320 739 aa24.39■■□□□ 1.49
SLC48A1-208ENST00000551301 KBTBD3Q8NAB2 608 aa24.39■■□□□ 1.49
SLC48A1-208ENST00000551301 U2AF1L4Q8WU68 220 aaKnown RBP24.39■■□□□ 1.49
SLC48A1-208ENST00000551301 ARHGEF10LQ9HCE6 1279 aa24.39■■□□□ 1.49
SLC48A1-208ENST00000551301 RABGAP1Q9Y3P9 1069 aa24.39■■□□□ 1.49
SLC48A1-208ENST00000551301 USP17L12C9JPN9 530 aa24.38■■□□□ 1.49
SLC48A1-208ENST00000551301 USP17L21D6R901 530 aa24.38■■□□□ 1.49
SLC48A1-208ENST00000551301 SLFNL1Q499Z3 407 aa24.38■■□□□ 1.49
SLC48A1-208ENST00000551301 C12orf60Q5U649 245 aa24.38■■□□□ 1.49
SLC48A1-208ENST00000551301 CATSPERGQ6ZRH7 1159 aa24.38■■□□□ 1.49
SLC48A1-208ENST00000551301 TRMT44Q8IYL2 757 aaKnown RBP24.38■■□□□ 1.49
SLC48A1-208ENST00000551301 TXNRD2Q9NNW7 524 aa24.38■■□□□ 1.49
SLC48A1-208ENST00000551301 TTC41PQ6P2S7 1318 aa24.37■■□□□ 1.49
SLC48A1-208ENST00000551301 SGPL1O95470 568 aa24.37■■□□□ 1.49
SLC48A1-208ENST00000551301 TFRCP02786 760 aaKnown RBP24.37■■□□□ 1.49
SLC48A1-208ENST00000551301 DYNLL2Q96FJ2 89 aa24.37■■□□□ 1.49
SLC48A1-208ENST00000551301 HTATIP2Q9BUP3 242 aa24.37■■□□□ 1.49
SLC48A1-208ENST00000551301 PUS7LQ9H0K6 701 aaKnown RBP24.37■■□□□ 1.49
SLC48A1-208ENST00000551301 RPAP3Q9H6T3 665 aaPredicted RBP24.37■■□□□ 1.49
SLC48A1-208ENST00000551301 ARPP21Q9UBL0 812 aaPredicted RBP24.37■■□□□ 1.49
SLC48A1-208ENST00000551301 GJD2Q9UKL4 321 aa24.37■■□□□ 1.49
SLC48A1-208ENST00000551301 PCDHB15Q9Y5E8 787 aa24.37■■□□□ 1.49
SLC48A1-208ENST00000551301 CEP290O15078 2479 aa24.36■■□□□ 1.49
SLC48A1-208ENST00000551301 RNF113AO15541 343 aaKnown RBP24.36■■□□□ 1.49
SLC48A1-208ENST00000551301 GUCY1A2P33402 732 aa24.36■■□□□ 1.49
SLC48A1-208ENST00000551301 SLC44A5Q8NCS7 719 aa24.36■■□□□ 1.49
SLC48A1-208ENST00000551301 APPBP2Q92624 585 aa24.36■■□□□ 1.49
SLC48A1-208ENST00000551301 SHISA4Q96DD7 197 aa24.36■■□□□ 1.49
SLC48A1-208ENST00000551301 YTHDC1Q96MU7 727 aaKnown RBP24.36■■□□□ 1.49
SLC48A1-208ENST00000551301 DEFB118Q96PH6 123 aa24.36■■□□□ 1.49
SLC48A1-208ENST00000551301 MYH8P13535 1937 aa24.35■■□□□ 1.49
SLC48A1-208ENST00000551301 XRCC5P13010 732 aaKnown RBP24.35■■□□□ 1.49
SLC48A1-208ENST00000551301 CYP2B6P20813 491 aa24.35■■□□□ 1.49
SLC48A1-208ENST00000551301 CDK8P49336 464 aa24.35■■□□□ 1.49
SLC48A1-208ENST00000551301 PLEKHH3Q7Z736 793 aa24.35■■□□□ 1.49
SLC48A1-208ENST00000551301 TANGO6Q9C0B7 1094 aa24.35■■□□□ 1.49
SLC48A1-208ENST00000551301 HOXC10Q9NYD6 342 aa24.35■■□□□ 1.49
SLC48A1-208ENST00000551301 BAZ2AQ9UIF9 1905 aaKnown RBP24.35■■□□□ 1.49
SLC48A1-208ENST00000551301 FARP2O94887 1054 aaPredicted RBP24.34■■□□□ 1.49
SLC48A1-208ENST00000551301 GNAT2P19087 354 aa24.34■■□□□ 1.49
SLC48A1-208ENST00000551301 RGS2P41220 211 aa24.34■■□□□ 1.49
SLC48A1-208ENST00000551301 EVX2Q03828 476 aa24.34■■□□□ 1.49
SLC48A1-208ENST00000551301 ICA1Q05084 483 aa24.34■■□□□ 1.49
SLC48A1-208ENST00000551301 WDR78Q5VTH9 848 aa24.34■■□□□ 1.49
SLC48A1-208ENST00000551301 TSHZ3Q63HK5 1081 aa24.34■■□□□ 1.49
SLC48A1-208ENST00000551301 GIMAP6Q6P9H5 292 aa24.34■■□□□ 1.49
SLC48A1-208ENST00000551301 C16orf86Q6ZW13 317 aa24.34■■□□□ 1.49
SLC48A1-208ENST00000551301 LPAR1Q92633 364 aa24.34■■□□□ 1.49
SLC48A1-208ENST00000551301 DPF3Q92784 378 aa24.34■■□□□ 1.49
SLC48A1-208ENST00000551301 STRBPQ96SI9 672 aaKnown RBP24.34■■□□□ 1.49
SLC48A1-208ENST00000551301 HMX1Q9NP08 348 aaPredicted RBP24.34■■□□□ 1.49
SLC48A1-208ENST00000551301 BRCA2P51587 3418 aa24.33■■□□□ 1.49
SLC48A1-208ENST00000551301 COG2Q14746 738 aa24.33■■□□□ 1.49
SLC48A1-208ENST00000551301 Q3C1V9 767 aa24.33■■□□□ 1.49
SLC48A1-208ENST00000551301 CTR9Q6PD62 1173 aa24.33■■□□□ 1.49
SLC48A1-208ENST00000551301 LBX2Q6XYB7 198 aa24.33■■□□□ 1.49
SLC48A1-208ENST00000551301 GPR142Q7Z601 462 aa24.33■■□□□ 1.49
SLC48A1-208ENST00000551301 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.33■■□□□ 1.49
SLC48A1-208ENST00000551301 PAK6Q9NQU5 681 aaPredicted RBP24.33■■□□□ 1.49
SLC48A1-208ENST00000551301 IVNS1ABPQ9Y6Y0 642 aa24.33■■□□□ 1.49
SLC48A1-208ENST00000551301 RPTORQ8N122 1335 aa24.33■■□□□ 1.48
SLC48A1-208ENST00000551301 CYP2D7A0A087X1C5 515 aa24.32■■□□□ 1.48
SLC48A1-208ENST00000551301 PEX10O60683 326 aa24.32■■□□□ 1.48
SLC48A1-208ENST00000551301 CHGBP05060 677 aa24.32■■□□□ 1.48
SLC48A1-208ENST00000551301 AKR1B1P15121 316 aa24.32■■□□□ 1.48
SLC48A1-208ENST00000551301 ZKSCAN1P17029 563 aaPredicted RBP24.32■■□□□ 1.48
SLC48A1-208ENST00000551301 PORCNQ9H237 461 aa24.32■■□□□ 1.48
SLC48A1-208ENST00000551301 KANSL2Q9H9L4 492 aa24.32■■□□□ 1.48
SLC48A1-208ENST00000551301 ZNF287Q9HBT7 754 aa24.32■■□□□ 1.48
SLC48A1-208ENST00000551301 MKI67P46013 3256 aaKnown RBP24.31■■□□□ 1.48
SLC48A1-208ENST00000551301 A0A1W2PRG0 241 aa24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms