RNA–Protein interactions for RNA: ENST00000550075.5

CPSF6-205, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-205ENST00000550075 PDE4BQ07343 736 aa30.91■■■□□ 2.54
CPSF6-205ENST00000550075 TREML2Q5T2D2 321 aa30.91■■■□□ 2.54
CPSF6-205ENST00000550075 CWC27Q6UX04 472 aaKnown RBP30.91■■■□□ 2.54
CPSF6-205ENST00000550075 KIAA1683Q9H0B3 1180 aa30.91■■■□□ 2.54
CPSF6-205ENST00000550075 ZMYM6O95789 1325 aa30.91■■■□□ 2.54
CPSF6-205ENST00000550075 GUCY1A2P33402 732 aa30.9■■■□□ 2.54
CPSF6-205ENST00000550075 PPARAQ07869 468 aa30.9■■■□□ 2.54
CPSF6-205ENST00000550075 DGKZQ13574 1117 aa30.9■■■□□ 2.54
CPSF6-205ENST00000550075 ALX1Q15699 326 aa30.9■■■□□ 2.54
CPSF6-205ENST00000550075 VPS53Q5VIR6 699 aa30.9■■■□□ 2.54
CPSF6-205ENST00000550075 ZNF589Q86UQ0 364 aaPredicted RBP30.9■■■□□ 2.54
CPSF6-205ENST00000550075 SMCR8Q8TEV9 937 aaPredicted RBP30.9■■■□□ 2.54
CPSF6-205ENST00000550075 SH2D4AQ9H788 454 aa30.9■■■□□ 2.54
CPSF6-205ENST00000550075 ARHGEF10LQ9HCE6 1279 aa30.9■■■□□ 2.54
CPSF6-205ENST00000550075 FOXP2O15409 715 aa30.89■■■□□ 2.54
CPSF6-205ENST00000550075 OSBPP22059 807 aa30.89■■■□□ 2.54
CPSF6-205ENST00000550075 ICA1Q05084 483 aa30.89■■■□□ 2.54
CPSF6-205ENST00000550075 ARHGEF6Q15052 776 aa30.89■■■□□ 2.54
CPSF6-205ENST00000550075 STK11IPQ8N1F8 1099 aa30.89■■■□□ 2.54
CPSF6-205ENST00000550075 CYP2C8P10632 490 aa30.88■■■□□ 2.53
CPSF6-205ENST00000550075 ERICH6BQ5W0A0 696 aa30.88■■■□□ 2.53
CPSF6-205ENST00000550075 C12orf42Q96LP6 360 aa30.88■■■□□ 2.53
CPSF6-205ENST00000550075 ADGRA2Q96PE1 1338 aa30.88■■■□□ 2.53
CPSF6-205ENST00000550075 HSPD1P10809 573 aaKnown RBP30.87■■■□□ 2.53
CPSF6-205ENST00000550075 RASA1P20936 1047 aa30.87■■■□□ 2.53
CPSF6-205ENST00000550075 IRX3P78415 501 aaPredicted RBP30.87■■■□□ 2.53
CPSF6-205ENST00000550075 KIF22Q14807 665 aa30.87■■■□□ 2.53
CPSF6-205ENST00000550075 ZYXQ15942 572 aaKnown RBP30.87■■■□□ 2.53
CPSF6-205ENST00000550075 CPA4Q9UI42 421 aa30.87■■■□□ 2.53
CPSF6-205ENST00000550075 RAD50Q92878 1312 aa30.87■■■□□ 2.53
CPSF6-205ENST00000550075 C17orf99Q6UX52 265 aa30.86■■■□□ 2.53
CPSF6-205ENST00000550075 ZNF444Q8N0Y2 327 aaPredicted RBP30.86■■■□□ 2.53
CPSF6-205ENST00000550075 CD99L2Q8TCZ2 262 aa30.86■■■□□ 2.53
CPSF6-205ENST00000550075 ACER1Q8TDN7 264 aa30.86■■■□□ 2.53
CPSF6-205ENST00000550075 RUFY2Q8WXA3 655 aa30.86■■■□□ 2.53
CPSF6-205ENST00000550075 KANSL2Q9H9L4 492 aa30.86■■■□□ 2.53
CPSF6-205ENST00000550075 GREB1LQ9C091 1923 aaPredicted RBP30.86■■■□□ 2.53
CPSF6-205ENST00000550075 PKN2Q16513 984 aaKnown RBP30.85■■■□□ 2.53
CPSF6-205ENST00000550075 MCOLN1Q9GZU1 580 aa30.85■■■□□ 2.53
CPSF6-205ENST00000550075 EMILIN3Q9NT22 766 aa30.85■■■□□ 2.53
CPSF6-205ENST00000550075 ANAPC4Q9UJX5 808 aa30.85■■■□□ 2.53
CPSF6-205ENST00000550075 HOXA7P31268 230 aaPredicted RBP30.84■■■□□ 2.53
CPSF6-205ENST00000550075 FGAP02671 866 aa30.83■■■□□ 2.53
CPSF6-205ENST00000550075 GCLCP48506 637 aaPredicted RBP30.83■■■□□ 2.53
CPSF6-205ENST00000550075 ASCC2Q9H1I8 757 aaPredicted RBP30.83■■■□□ 2.53
CPSF6-205ENST00000550075 PRDM1O75626 825 aa30.82■■■□□ 2.52
CPSF6-205ENST00000550075 EFCC1Q9HA90 598 aa30.82■■■□□ 2.52
CPSF6-205ENST00000550075 TRIM17Q9Y577 477 aa30.82■■■□□ 2.52
CPSF6-205ENST00000550075 BCRP11274 1271 aa30.81■■■□□ 2.52
CPSF6-205ENST00000550075 VCAM1P19320 739 aa30.81■■■□□ 2.52
CPSF6-205ENST00000550075 LACTBP83111 547 aaPredicted RBP30.81■■■□□ 2.52
CPSF6-205ENST00000550075 ATP2B2Q01814 1243 aa30.81■■■□□ 2.52
CPSF6-205ENST00000550075 CLEC10AQ8IUN9 316 aa30.81■■■□□ 2.52
CPSF6-205ENST00000550075 TMX2Q9Y320 296 aa30.81■■■□□ 2.52
CPSF6-205ENST00000550075 PLIN4Q96Q06 1357 aa30.8■■■□□ 2.52
CPSF6-205ENST00000550075 LAMA4Q16363 1823 aa30.8■■■□□ 2.52
CPSF6-205ENST00000550075 USP17L15C9J2P7 530 aa30.8■■■□□ 2.52
CPSF6-205ENST00000550075 USP17L13C9JLJ4 530 aa30.8■■■□□ 2.52
CPSF6-205ENST00000550075 USP17L11C9JVI0 530 aa30.8■■■□□ 2.52
CPSF6-205ENST00000550075 USP17L18D6R9N7 530 aa30.8■■■□□ 2.52
CPSF6-205ENST00000550075 USP17L22D6RA61 530 aa30.8■■■□□ 2.52
CPSF6-205ENST00000550075 USP17L17D6RBQ6 530 aa30.8■■■□□ 2.52
CPSF6-205ENST00000550075 USP17L19D6RCP7 530 aa30.8■■■□□ 2.52
CPSF6-205ENST00000550075 USP17L20D6RJB6 530 aa30.8■■■□□ 2.52
CPSF6-205ENST00000550075 TSPY3P0CV98 308 aa30.8■■■□□ 2.52
CPSF6-205ENST00000550075 TSPY8P0CW00 308 aa30.8■■■□□ 2.52
CPSF6-205ENST00000550075 CHMLP26374 656 aa30.8■■■□□ 2.52
CPSF6-205ENST00000550075 CTDSPL2Q05D32 466 aa30.8■■■□□ 2.52
CPSF6-205ENST00000550075 USP17L24Q0WX57 530 aa30.8■■■□□ 2.52
CPSF6-205ENST00000550075 OTOP1Q7RTM1 612 aa30.8■■■□□ 2.52
CPSF6-205ENST00000550075 GTF3C2Q8WUA4 911 aaPredicted RBP30.8■■■□□ 2.52
CPSF6-205ENST00000550075 LPAR1Q92633 364 aa30.8■■■□□ 2.52
CPSF6-205ENST00000550075 DSCC1Q9BVC3 393 aa30.8■■■□□ 2.52
CPSF6-205ENST00000550075 A0A1W2PRG0 241 aa30.79■■■□□ 2.52
CPSF6-205ENST00000550075 EEF2P13639 858 aaKnown RBP30.79■■■□□ 2.52
CPSF6-205ENST00000550075 DDX52Q9Y2R4 599 aaKnown RBP eCLIP30.79■■■□□ 2.52
CPSF6-205ENST00000550075 FAM110CQ1W6H9 321 aa30.78■■■□□ 2.52
CPSF6-205ENST00000550075 PPP4R3BQ5MIZ7 849 aa30.78■■■□□ 2.52
CPSF6-205ENST00000550075 VCPKMTQ9H867 229 aa30.78■■■□□ 2.52
CPSF6-205ENST00000550075 GOPCQ9HD26 462 aa30.78■■■□□ 2.52
CPSF6-205ENST00000550075 PPP4R2Q9NY27 417 aa30.78■■■□□ 2.52
CPSF6-205ENST00000550075 GNRH1P01148 92 aa30.77■■■□□ 2.52
CPSF6-205ENST00000550075 PCP11498 1178 aaKnown RBP30.77■■■□□ 2.52
CPSF6-205ENST00000550075 HERVK_113P62684 666 aa30.77■■■□□ 2.52
CPSF6-205ENST00000550075 BMP2KLQ5H9B9 411 aa30.77■■■□□ 2.52
CPSF6-205ENST00000550075 FBXO46Q6PJ61 603 aaPredicted RBP30.77■■■□□ 2.52
CPSF6-205ENST00000550075 NEDD1Q8NHV4 660 aa30.77■■■□□ 2.52
CPSF6-205ENST00000550075 GNL3Q9BVP2 549 aaKnown RBP eCLIP30.77■■■□□ 2.52
CPSF6-205ENST00000550075 NYAP2Q9P242 653 aa30.77■■■□□ 2.52
CPSF6-205ENST00000550075 CTNNA3Q9UI47 895 aa30.77■■■□□ 2.52
CPSF6-205ENST00000550075 ORC4O43929 436 aa30.76■■■□□ 2.51
CPSF6-205ENST00000550075 ABHD8Q96I13 439 aa30.76■■■□□ 2.51
CPSF6-205ENST00000550075 RNF41Q9H4P4 317 aaPredicted RBP30.76■■■□□ 2.51
CPSF6-205ENST00000550075 RPAP3Q9H6T3 665 aaPredicted RBP30.76■■■□□ 2.51
CPSF6-205ENST00000550075 TOMM22Q9NS69 142 aa30.76■■■□□ 2.51
CPSF6-205ENST00000550075 MYH4Q9Y623 1939 aa30.75■■■□□ 2.51
CPSF6-205ENST00000550075 TSPY2A6NKD2 308 aa30.75■■■□□ 2.51
CPSF6-205ENST00000550075 TFAP4Q01664 338 aa30.75■■■□□ 2.51
CPSF6-205ENST00000550075 SIAH1Q8IUQ4 282 aa30.75■■■□□ 2.51
CPSF6-205ENST00000550075 ANKRD13CQ8N6S4 541 aa30.75■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms