RNA–Protein interactions for RNA: ENST00000549580.1

SNRPF-202, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-202ENST00000549580 FANCCQ00597 558 aa6.61□□□□□ -1.35
SNRPF-202ENST00000549580 PRRT2Q7Z6L0 340 aaPredicted RBP6.61□□□□□ -1.35
SNRPF-202ENST00000549580 MARCH10Q8NA82 808 aaPredicted RBP6.61□□□□□ -1.35
SNRPF-202ENST00000549580 FOXQ1Q9C009 403 aa6.61□□□□□ -1.35
SNRPF-202ENST00000549580 PICK1Q9NRD5 415 aa6.61□□□□□ -1.35
SNRPF-202ENST00000549580 AKAP2Q9Y2D5 859 aa6.61□□□□□ -1.35
SNRPF-202ENST00000549580 SHROOM4Q9ULL8 1493 aa6.6□□□□□ -1.35
SNRPF-202ENST00000549580 FAM155AB1AL88 458 aaPredicted RBP6.6□□□□□ -1.35
SNRPF-202ENST00000549580 RING1Q06587 406 aa6.6□□□□□ -1.35
SNRPF-202ENST00000549580 KRTAP1-1Q07627 177 aa6.6□□□□□ -1.35
SNRPF-202ENST00000549580 ARMCX6Q7L4S7 300 aa6.6□□□□□ -1.35
SNRPF-202ENST00000549580 ABHD4Q8TB40 342 aa6.6□□□□□ -1.35
SNRPF-202ENST00000549580 CACNA2D2Q9NY47 1150 aa6.6□□□□□ -1.35
SNRPF-202ENST00000549580 GIPC1O14908 333 aa6.59□□□□□ -1.35
SNRPF-202ENST00000549580 TRIM13O60858 407 aa6.59□□□□□ -1.35
SNRPF-202ENST00000549580 CTSHP09668 335 aa6.59□□□□□ -1.35
SNRPF-202ENST00000549580 NME2P22392 152 aa6.59□□□□□ -1.35
SNRPF-202ENST00000549580 HNRNPUQ00839 825 aaKnown RBP eCLIP6.59□□□□□ -1.35
SNRPF-202ENST00000549580 NAALADL2Q58DX5 795 aa6.59□□□□□ -1.35
SNRPF-202ENST00000549580 ZBTB37Q5TC79 503 aa6.59□□□□□ -1.35
SNRPF-202ENST00000549580 RASIP1Q5U651 963 aa6.59□□□□□ -1.35
SNRPF-202ENST00000549580 C9orf131Q5VYM1 1079 aa6.59□□□□□ -1.35
SNRPF-202ENST00000549580 NT5DC4Q86YG4 428 aa6.59□□□□□ -1.35
SNRPF-202ENST00000549580 RIN3Q8TB24 985 aa6.59□□□□□ -1.35
SNRPF-202ENST00000549580 SREK1Q8WXA9 508 aaKnown RBP6.59□□□□□ -1.35
SNRPF-202ENST00000549580 RNF34Q969K3 372 aa6.59□□□□□ -1.35
SNRPF-202ENST00000549580 SLAMF8Q9P0V8 285 aa6.59□□□□□ -1.35
SNRPF-202ENST00000549580 SPG7Q9UQ90 795 aa6.59□□□□□ -1.35
SNRPF-202ENST00000549580 DNAJC25-GNG10A0A024R161 153 aa6.58□□□□□ -1.36
SNRPF-202ENST00000549580 PSPNO60542 156 aa6.58□□□□□ -1.36
SNRPF-202ENST00000549580 PAGE1O75459 146 aa6.58□□□□□ -1.36
SNRPF-202ENST00000549580 ZNF76P36508 570 aa6.58□□□□□ -1.36
SNRPF-202ENST00000549580 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.58□□□□□ -1.36
SNRPF-202ENST00000549580 RALGPS1Q5JS13 557 aa6.58□□□□□ -1.36
SNRPF-202ENST00000549580 TTC6Q86TZ1 520 aa6.58□□□□□ -1.36
SNRPF-202ENST00000549580 BAHD1Q8TBE0 780 aaPredicted RBP6.58□□□□□ -1.36
SNRPF-202ENST00000549580 CCDC120Q96HB5 630 aa6.58□□□□□ -1.36
SNRPF-202ENST00000549580 CRELD1Q96HD1 420 aa6.58□□□□□ -1.36
SNRPF-202ENST00000549580 DRC1Q96MC2 740 aa6.58□□□□□ -1.36
SNRPF-202ENST00000549580 ALPK1Q96QP1 1244 aa6.58□□□□□ -1.36
SNRPF-202ENST00000549580 BCO2Q9BYV7 579 aa6.58□□□□□ -1.36
SNRPF-202ENST00000549580 MAPK8IP1Q9UQF2 711 aa6.58□□□□□ -1.36
SNRPF-202ENST00000549580 ST14Q9Y5Y6 855 aa6.58□□□□□ -1.36
SNRPF-202ENST00000549580 WASH4PA8MWX3 477 aa6.57□□□□□ -1.36
SNRPF-202ENST00000549580 ADRB1P08588 477 aa6.57□□□□□ -1.36
SNRPF-202ENST00000549580 BMP6P22004 513 aa6.57□□□□□ -1.36
SNRPF-202ENST00000549580 EIF4BP23588 611 aaKnown RBP6.57□□□□□ -1.36
SNRPF-202ENST00000549580 TRHRP34981 398 aaPredicted RBP6.57□□□□□ -1.36
SNRPF-202ENST00000549580 CDC37L1Q7L3B6 337 aa6.57□□□□□ -1.36
SNRPF-202ENST00000549580 UBE2FQ969M7 185 aa6.57□□□□□ -1.36
SNRPF-202ENST00000549580 OSBPL7Q9BZF2 842 aa6.57□□□□□ -1.36
SNRPF-202ENST00000549580 TGIF2Q9GZN2 237 aa6.57□□□□□ -1.36
SNRPF-202ENST00000549580 XYLT2Q9H1B5 865 aa6.57□□□□□ -1.36
SNRPF-202ENST00000549580 FBRSQ9HAH7 460 aa6.57□□□□□ -1.36
SNRPF-202ENST00000549580 TPX2Q9ULW0 747 aaKnown RBP6.57□□□□□ -1.36
SNRPF-202ENST00000549580 HK2P52789 917 aa6.56□□□□□ -1.36
SNRPF-202ENST00000549580 NXPE4Q6UWF7 544 aa6.56□□□□□ -1.36
SNRPF-202ENST00000549580 MFSD4AQ8N468 514 aa6.56□□□□□ -1.36
SNRPF-202ENST00000549580 BORCS6Q96GS4 357 aa6.56□□□□□ -1.36
SNRPF-202ENST00000549580 C12orf49Q9H741 205 aa6.56□□□□□ -1.36
SNRPF-202ENST00000549580 ZSWIM5Q9P217 1185 aa6.56□□□□□ -1.36
SNRPF-202ENST00000549580 CAPN6Q9Y6Q1 641 aa6.56□□□□□ -1.36
SNRPF-202ENST00000549580 FANCGO15287 622 aa6.55□□□□□ -1.36
SNRPF-202ENST00000549580 CBX7O95931 251 aa6.55□□□□□ -1.36
SNRPF-202ENST00000549580 INPP5AQ14642 412 aa6.55□□□□□ -1.36
SNRPF-202ENST00000549580 SFRP5Q5T4F7 317 aa6.55□□□□□ -1.36
SNRPF-202ENST00000549580 MIPEPQ99797 713 aa6.55□□□□□ -1.36
SNRPF-202ENST00000549580 EMILIN2Q9BXX0 1053 aa6.55□□□□□ -1.36
SNRPF-202ENST00000549580 MCOLN1Q9GZU1 580 aa6.55□□□□□ -1.36
SNRPF-202ENST00000549580 PCDHA4Q9UN74 947 aa6.55□□□□□ -1.36
SNRPF-202ENST00000549580 USP31Q70CQ4 1352 aa6.55□□□□□ -1.36
SNRPF-202ENST00000549580 FBXO24O75426 580 aa6.54□□□□□ -1.36
SNRPF-202ENST00000549580 LRIG2O94898 1065 aa6.54□□□□□ -1.36
SNRPF-202ENST00000549580 RAC2P15153 192 aa6.54□□□□□ -1.36
SNRPF-202ENST00000549580 DLG4P78352 724 aa6.54□□□□□ -1.36
SNRPF-202ENST00000549580 SLBPQ14493 270 aaKnown RBP eCLIP6.54□□□□□ -1.36
SNRPF-202ENST00000549580 NKG7Q16617 165 aa6.54□□□□□ -1.36
SNRPF-202ENST00000549580 TPTE2Q6XPS3 522 aa6.54□□□□□ -1.36
SNRPF-202ENST00000549580 C22orf34Q6ZV56 151 aa6.54□□□□□ -1.36
SNRPF-202ENST00000549580 SLC43A3Q8NBI5 491 aa6.54□□□□□ -1.36
SNRPF-202ENST00000549580 NECAB3Q96P71 396 aaPredicted RBP6.54□□□□□ -1.36
SNRPF-202ENST00000549580 TINF2Q9BSI4 451 aa6.54□□□□□ -1.36
SNRPF-202ENST00000549580 SRCIN1Q9C0H9 1055 aa6.54□□□□□ -1.36
SNRPF-202ENST00000549580 NLRP2Q9NX02 1062 aa6.54□□□□□ -1.36
SNRPF-202ENST00000549580 PRAMEF27A3QJZ7 478 aa6.53□□□□□ -1.36
SNRPF-202ENST00000549580 ENC1O14682 589 aa6.53□□□□□ -1.36
SNRPF-202ENST00000549580 HPXP02790 462 aa6.53□□□□□ -1.36
SNRPF-202ENST00000549580 PTPN11Q06124 597 aaPredicted RBP6.53□□□□□ -1.36
SNRPF-202ENST00000549580 SF3A1Q15459 793 aaKnown RBP6.53□□□□□ -1.36
SNRPF-202ENST00000549580 TCERG1LQ5VWI1 586 aa6.53□□□□□ -1.36
SNRPF-202ENST00000549580 MYLIPQ8WY64 445 aa6.53□□□□□ -1.36
SNRPF-202ENST00000549580 ADAMTS10Q9H324 1103 aa6.53□□□□□ -1.36
SNRPF-202ENST00000549580 PPP4R2Q9NY27 417 aa6.53□□□□□ -1.36
SNRPF-202ENST00000549580 FAM8A1Q9UBU6 413 aa6.53□□□□□ -1.36
SNRPF-202ENST00000549580 MYOCOSA0A1B0GUC4 107 aa6.52□□□□□ -1.37
SNRPF-202ENST00000549580 ESR1P03372 595 aa6.52□□□□□ -1.37
SNRPF-202ENST00000549580 CELA3BP08861 270 aa6.52□□□□□ -1.37
SNRPF-202ENST00000549580 ST13P50502 369 aaKnown RBP6.52□□□□□ -1.37
SNRPF-202ENST00000549580 LRFN4Q6PJG9 635 aa6.52□□□□□ -1.37
SNRPF-202ENST00000549580 C3orf58Q8NDZ4 430 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms