RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 KRT23Q9C075 422 aa9.55□□□□□ -0.88
DEPDC4-207ENST00000549249 RNF41Q9H4P4 317 aaPredicted RBP9.55□□□□□ -0.88
DEPDC4-207ENST00000549249 CNNM2Q9H8M5 875 aa9.55□□□□□ -0.88
DEPDC4-207ENST00000549249 MYOZ2Q9NPC6 264 aa9.55□□□□□ -0.88
DEPDC4-207ENST00000549249 ZSWIM5Q9P217 1185 aa9.55□□□□□ -0.88
DEPDC4-207ENST00000549249 ZNF70Q9UC06 446 aaPredicted RBP9.55□□□□□ -0.88
DEPDC4-207ENST00000549249 LIMCH1Q9UPQ0 1083 aa9.55□□□□□ -0.88
DEPDC4-207ENST00000549249 GJA3Q9Y6H8 435 aa9.55□□□□□ -0.88
DEPDC4-207ENST00000549249 CNTNAP1P78357 1384 aa9.54□□□□□ -0.88
DEPDC4-207ENST00000549249 CLRN2A0PK11 232 aa9.54□□□□□ -0.88
DEPDC4-207ENST00000549249 DDTLA6NHG4 134 aaPredicted RBP9.54□□□□□ -0.88
DEPDC4-207ENST00000549249 WNT10BO00744 389 aa9.54□□□□□ -0.88
DEPDC4-207ENST00000549249 SH2B2O14492 632 aaPredicted RBP9.54□□□□□ -0.88
DEPDC4-207ENST00000549249 HRO43593 1189 aa9.54□□□□□ -0.88
DEPDC4-207ENST00000549249 SLURP2P0DP57 97 aa9.54□□□□□ -0.88
DEPDC4-207ENST00000549249 PCP11498 1178 aaKnown RBP9.54□□□□□ -0.88
DEPDC4-207ENST00000549249 APOBRQ0VD83 1088 aa9.54□□□□□ -0.88
DEPDC4-207ENST00000549249 TCP10Q12799 353 aa9.54□□□□□ -0.88
DEPDC4-207ENST00000549249 FSTL1Q12841 308 aa9.54□□□□□ -0.88
DEPDC4-207ENST00000549249 TRDNQ13061 729 aa9.54□□□□□ -0.88
DEPDC4-207ENST00000549249 ANKRD1Q15327 319 aa9.54□□□□□ -0.88
DEPDC4-207ENST00000549249 DMRTA1Q5VZB9 504 aa9.54□□□□□ -0.88
DEPDC4-207ENST00000549249 IGDCC4Q8TDY8 1250 aa9.54□□□□□ -0.88
DEPDC4-207ENST00000549249 SENP2Q9HC62 589 aa9.54□□□□□ -0.88
DEPDC4-207ENST00000549249 NMRK2Q9NPI5 230 aa9.54□□□□□ -0.88
DEPDC4-207ENST00000549249 TOMM22Q9NS69 142 aa9.54□□□□□ -0.88
DEPDC4-207ENST00000549249 CNOT7Q9UIV1 285 aaKnown RBP9.54□□□□□ -0.88
DEPDC4-207ENST00000549249 ATRNL1Q5VV63 1379 aa9.53□□□□□ -0.88
DEPDC4-207ENST00000549249 MYH4Q9Y623 1939 aa9.53□□□□□ -0.88
DEPDC4-207ENST00000549249 ENTPD3O75355 529 aa9.53□□□□□ -0.88
DEPDC4-207ENST00000549249 RASA1P20936 1047 aa9.53□□□□□ -0.88
DEPDC4-207ENST00000549249 DDIT3P35638 169 aa9.53□□□□□ -0.88
DEPDC4-207ENST00000549249 CDK8P49336 464 aa9.53□□□□□ -0.88
DEPDC4-207ENST00000549249 SEC23AQ15436 765 aa9.53□□□□□ -0.88
DEPDC4-207ENST00000549249 NBPF9Q3BBW0 867 aa9.53□□□□□ -0.88
DEPDC4-207ENST00000549249 SAMD7Q7Z3H4 446 aa9.53□□□□□ -0.88
DEPDC4-207ENST00000549249 GPC2Q8N158 579 aa9.53□□□□□ -0.88
DEPDC4-207ENST00000549249 TRPM4Q8TD43 1214 aa9.53□□□□□ -0.88
DEPDC4-207ENST00000549249 TMEM87BQ96K49 555 aa9.53□□□□□ -0.88
DEPDC4-207ENST00000549249 ZKSCAN3Q9BRR0 538 aa9.53□□□□□ -0.88
DEPDC4-207ENST00000549249 DNAJC18Q9H819 358 aa9.53□□□□□ -0.88
DEPDC4-207ENST00000549249 LY9Q9HBG7 655 aa9.53□□□□□ -0.88
DEPDC4-207ENST00000549249 GPRC5DQ9NZD1 345 aa9.53□□□□□ -0.88
DEPDC4-207ENST00000549249 BRPF3Q9ULD4 1205 aa9.53□□□□□ -0.88
DEPDC4-207ENST00000549249 ASTN2O75129 1339 aaPredicted RBP9.53□□□□□ -0.88
DEPDC4-207ENST00000549249 ZC3H4Q9UPT8 1303 aaKnown RBP9.53□□□□□ -0.88
DEPDC4-207ENST00000549249 ATAD5Q96QE3 1844 aa9.52□□□□□ -0.89
DEPDC4-207ENST00000549249 TCP10L2B9ZVM9 353 aa9.52□□□□□ -0.89
DEPDC4-207ENST00000549249 DTNBO60941 627 aa9.52□□□□□ -0.89
DEPDC4-207ENST00000549249 DDNO94850 711 aaPredicted RBP9.52□□□□□ -0.89
DEPDC4-207ENST00000549249 SLC3A2P08195 630 aaKnown RBP9.52□□□□□ -0.89
DEPDC4-207ENST00000549249 MMP14P50281 582 aa9.52□□□□□ -0.89
DEPDC4-207ENST00000549249 EVCP57679 992 aa9.52□□□□□ -0.89
DEPDC4-207ENST00000549249 PDE4BQ07343 736 aa9.52□□□□□ -0.89
DEPDC4-207ENST00000549249 KIF4BQ2VIQ3 1234 aa9.52□□□□□ -0.89
DEPDC4-207ENST00000549249 TBC1D10BQ4KMP7 808 aaPredicted RBP9.52□□□□□ -0.89
DEPDC4-207ENST00000549249 FAM47AQ5JRC9 791 aa9.52□□□□□ -0.89
DEPDC4-207ENST00000549249 TTC6Q86TZ1 520 aa9.52□□□□□ -0.89
DEPDC4-207ENST00000549249 CCDC83Q8IWF9 413 aa9.52□□□□□ -0.89
DEPDC4-207ENST00000549249 AMOTL1Q8IY63 956 aa9.52□□□□□ -0.89
DEPDC4-207ENST00000549249 NECAB1Q8N987 351 aa9.52□□□□□ -0.89
DEPDC4-207ENST00000549249 ESR2Q92731 530 aa9.52□□□□□ -0.89
DEPDC4-207ENST00000549249 ZSCAN31Q96LW9 406 aaPredicted RBP9.52□□□□□ -0.89
DEPDC4-207ENST00000549249 MTA3Q9BTC8 594 aa9.52□□□□□ -0.89
DEPDC4-207ENST00000549249 SLKQ9H2G2 1235 aaPredicted RBP9.52□□□□□ -0.89
DEPDC4-207ENST00000549249 SH2B1Q9NRF2 756 aaPredicted RBP9.52□□□□□ -0.89
DEPDC4-207ENST00000549249 DAXXQ9UER7 740 aaPredicted RBP9.52□□□□□ -0.89
DEPDC4-207ENST00000549249 PGAP2Q9UHJ9 254 aa9.52□□□□□ -0.89
DEPDC4-207ENST00000549249 ANGEL1Q9UNK9 670 aaKnown RBP9.52□□□□□ -0.89
DEPDC4-207ENST00000549249 MYH6P13533 1939 aa9.52□□□□□ -0.89
DEPDC4-207ENST00000549249 PLIN4Q96Q06 1357 aa9.51□□□□□ -0.89
DEPDC4-207ENST00000549249 FAM196BA6NMK8 535 aa9.51□□□□□ -0.89
DEPDC4-207ENST00000549249 IFIT3O14879 490 aaKnown RBP9.51□□□□□ -0.89
DEPDC4-207ENST00000549249 RANBP6O60518 1105 aaKnown RBP9.51□□□□□ -0.89
DEPDC4-207ENST00000549249 NMT2O60551 498 aa9.51□□□□□ -0.89
DEPDC4-207ENST00000549249 PDIA3P30101 505 aaKnown RBP9.51□□□□□ -0.89
DEPDC4-207ENST00000549249 SHMT1P34896 483 aa9.51□□□□□ -0.89
DEPDC4-207ENST00000549249 EPS15P42566 896 aa9.51□□□□□ -0.89
DEPDC4-207ENST00000549249 FOSBP53539 338 aa9.51□□□□□ -0.89
DEPDC4-207ENST00000549249 SCRN1Q12765 414 aa9.51□□□□□ -0.89
DEPDC4-207ENST00000549249 STK3Q13188 491 aa9.51□□□□□ -0.89
DEPDC4-207ENST00000549249 TMEM67Q5HYA8 995 aa9.51□□□□□ -0.89
DEPDC4-207ENST00000549249 RBM26Q5T8P6 1007 aaKnown RBP9.51□□□□□ -0.89
DEPDC4-207ENST00000549249 FKBP1CQ5VVH2 108 aa9.51□□□□□ -0.89
DEPDC4-207ENST00000549249 SGMS1Q86VZ5 419 aa9.51□□□□□ -0.89
DEPDC4-207ENST00000549249 ENAHQ8N8S7 591 aaPredicted RBP9.51□□□□□ -0.89
DEPDC4-207ENST00000549249 FAM151AQ8WW52 585 aa9.51□□□□□ -0.89
DEPDC4-207ENST00000549249 GTF3C6Q969F1 213 aa9.51□□□□□ -0.89
DEPDC4-207ENST00000549249 ZNF274Q96GC6 653 aaPredicted RBP9.51□□□□□ -0.89
DEPDC4-207ENST00000549249 EHD4Q9H223 541 aa9.51□□□□□ -0.89
DEPDC4-207ENST00000549249 RRAGCQ9HB90 399 aa9.51□□□□□ -0.89
DEPDC4-207ENST00000549249 VEZTQ9HBM0 779 aa9.51□□□□□ -0.89
DEPDC4-207ENST00000549249 TMOD2Q9NZR1 351 aa9.51□□□□□ -0.89
DEPDC4-207ENST00000549249 SERPINB13Q9UIV8 391 aa9.51□□□□□ -0.89
DEPDC4-207ENST00000549249 SCAF8Q9UPN6 1271 aaKnown RBP9.51□□□□□ -0.89
DEPDC4-207ENST00000549249 HPS5Q9UPZ3 1129 aa9.51□□□□□ -0.89
DEPDC4-207ENST00000549249 SCN4AP35499 1836 aa9.51□□□□□ -0.89
DEPDC4-207ENST00000549249 TNKSO95271 1327 aa9.51□□□□□ -0.89
DEPDC4-207ENST00000549249 WDR90Q96KV7 1748 aa9.51□□□□□ -0.89
DEPDC4-207ENST00000549249 NID2Q14112 1375 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms