RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 KLHL6Q8WZ60 621 aa6.21□□□□□ -1.42
PTCH1-216ENST00000548379 DEPDC7Q96QD5 511 aa6.21□□□□□ -1.42
PTCH1-216ENST00000548379 KIF2CQ99661 725 aa6.21□□□□□ -1.42
PTCH1-216ENST00000548379 DPH2Q9BQC3 489 aaPredicted RBP6.21□□□□□ -1.42
PTCH1-216ENST00000548379 YIPF2Q9BWQ6 316 aa6.21□□□□□ -1.42
PTCH1-216ENST00000548379 C1GALT1Q9NS00 363 aa6.21□□□□□ -1.42
PTCH1-216ENST00000548379 STK17AQ9UEE5 414 aa6.21□□□□□ -1.42
PTCH1-216ENST00000548379 MAPK8IP1Q9UQF2 711 aa6.21□□□□□ -1.42
PTCH1-216ENST00000548379 TLDC2A0PJX2 215 aa6.2□□□□□ -1.42
PTCH1-216ENST00000548379 C1QTNF9BB2RNN3 333 aa6.2□□□□□ -1.42
PTCH1-216ENST00000548379 BMP3P12645 472 aa6.2□□□□□ -1.42
PTCH1-216ENST00000548379 RAB6AP20340 208 aa6.2□□□□□ -1.42
PTCH1-216ENST00000548379 MAP4P27816 1152 aaKnown RBP6.2□□□□□ -1.42
PTCH1-216ENST00000548379 PMS1P54277 932 aaKnown RBP6.2□□□□□ -1.42
PTCH1-216ENST00000548379 LARP1BQ659C4 914 aaKnown RBP6.2□□□□□ -1.42
PTCH1-216ENST00000548379 MRM1Q6IN84 353 aaKnown RBP6.2□□□□□ -1.42
PTCH1-216ENST00000548379 C6orf15Q6UXA7 325 aaPredicted RBP6.2□□□□□ -1.42
PTCH1-216ENST00000548379 FAM178BQ8IXR5 827 aa6.2□□□□□ -1.42
PTCH1-216ENST00000548379 UTP4Q969X6 686 aaKnown RBP6.2□□□□□ -1.42
PTCH1-216ENST00000548379 VWCEQ96DN2 955 aa6.2□□□□□ -1.42
PTCH1-216ENST00000548379 B2RBV5 119 aa6.19□□□□□ -1.42
PTCH1-216ENST00000548379 KCNMA1Q12791 1236 aa6.19□□□□□ -1.42
PTCH1-216ENST00000548379 MAP7Q14244 749 aa6.19□□□□□ -1.42
PTCH1-216ENST00000548379 NCAPHQ15003 741 aa6.19□□□□□ -1.42
PTCH1-216ENST00000548379 PHACTR4Q8IZ21 702 aa6.19□□□□□ -1.42
PTCH1-216ENST00000548379 GATA6Q92908 595 aa6.19□□□□□ -1.42
PTCH1-216ENST00000548379 MRFAP1L1Q96HT8 127 aa6.19□□□□□ -1.42
PTCH1-216ENST00000548379 DHRS1Q96LJ7 313 aa6.19□□□□□ -1.42
PTCH1-216ENST00000548379 SRPK1Q96SB4 655 aaKnown RBP6.19□□□□□ -1.42
PTCH1-216ENST00000548379 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.19□□□□□ -1.42
PTCH1-216ENST00000548379 SSU72Q9NP77 194 aaKnown RBP6.19□□□□□ -1.42
PTCH1-216ENST00000548379 ST7Q9NRC1 585 aa6.19□□□□□ -1.42
PTCH1-216ENST00000548379 SUCOQ9UBS9 1254 aaKnown RBP6.19□□□□□ -1.42
PTCH1-216ENST00000548379 CEP131Q9UPN4 1083 aa6.19□□□□□ -1.42
PTCH1-216ENST00000548379 DAGLAQ9Y4D2 1042 aa6.19□□□□□ -1.42
PTCH1-216ENST00000548379 PDPK1O15530 556 aa6.18□□□□□ -1.42
PTCH1-216ENST00000548379 SLITRK5O94991 958 aa6.18□□□□□ -1.42
PTCH1-216ENST00000548379 JAZF1Q86VZ6 243 aa6.18□□□□□ -1.42
PTCH1-216ENST00000548379 PPFIBP1Q86W92 1011 aa6.18□□□□□ -1.42
PTCH1-216ENST00000548379 CLEC10AQ8IUN9 316 aa6.18□□□□□ -1.42
PTCH1-216ENST00000548379 NLGN1Q8N2Q7 840 aa6.18□□□□□ -1.42
PTCH1-216ENST00000548379 JMYQ8N9B5 988 aa6.18□□□□□ -1.42
PTCH1-216ENST00000548379 ZNF669Q96BR6 464 aaPredicted RBP6.18□□□□□ -1.42
PTCH1-216ENST00000548379 SLC6A18Q96N87 628 aa6.18□□□□□ -1.42
PTCH1-216ENST00000548379 PRDM10Q9NQV6 1147 aa6.18□□□□□ -1.42
PTCH1-216ENST00000548379 FAM95CA0A1B0GW59 222 aa6.17□□□□□ -1.42
PTCH1-216ENST00000548379 DHX15O43143 795 aaKnown RBP6.17□□□□□ -1.42
PTCH1-216ENST00000548379 SMARCA5O60264 1052 aaPredicted RBP6.17□□□□□ -1.42
PTCH1-216ENST00000548379 DDAH1O94760 285 aa6.17□□□□□ -1.42
PTCH1-216ENST00000548379 ITGB2P05107 769 aa6.17□□□□□ -1.42
PTCH1-216ENST00000548379 BBS9Q3SYG4 887 aa6.17□□□□□ -1.42
PTCH1-216ENST00000548379 LETMD1Q6P1Q0 360 aa6.17□□□□□ -1.42
PTCH1-216ENST00000548379 VHLLQ6RSH7 139 aa6.17□□□□□ -1.42
PTCH1-216ENST00000548379 BEND4Q6ZU67 534 aa6.17□□□□□ -1.42
PTCH1-216ENST00000548379 FAM214BQ7L5A3 538 aa6.17□□□□□ -1.42
PTCH1-216ENST00000548379 ST13P5Q8NFI4 369 aaPredicted RBP6.17□□□□□ -1.42
PTCH1-216ENST00000548379 RIN3Q8TB24 985 aa6.17□□□□□ -1.42
PTCH1-216ENST00000548379 FAM83CQ9BQN1 747 aa6.17□□□□□ -1.42
PTCH1-216ENST00000548379 SUSD2Q9UGT4 822 aa6.17□□□□□ -1.42
PTCH1-216ENST00000548379 PCDHB10Q9UN67 800 aa6.17□□□□□ -1.42
PTCH1-216ENST00000548379 C9IYK1 514 aa6.16□□□□□ -1.42
PTCH1-216ENST00000548379 CLEC3AO75596 197 aa6.16□□□□□ -1.42
PTCH1-216ENST00000548379 EOMESO95936 686 aa6.16□□□□□ -1.42
PTCH1-216ENST00000548379 GBP1P32455 592 aa6.16□□□□□ -1.42
PTCH1-216ENST00000548379 SLC7A5Q01650 507 aa6.16□□□□□ -1.42
PTCH1-216ENST00000548379 ANKRD39Q53RE8 183 aa6.16□□□□□ -1.42
PTCH1-216ENST00000548379 NBPF12Q5TAG4 269 aaPredicted RBP6.16□□□□□ -1.42
PTCH1-216ENST00000548379 XAGE3Q8WTP9 111 aa6.16□□□□□ -1.42
PTCH1-216ENST00000548379 SMARCC1Q92922 1105 aaPredicted RBP6.16□□□□□ -1.42
PTCH1-216ENST00000548379 MIPEPQ99797 713 aa6.16□□□□□ -1.42
PTCH1-216ENST00000548379 TMA7Q9Y2S6 64 aaKnown RBP6.16□□□□□ -1.42
PTCH1-216ENST00000548379 FAM86C2PA6NEL3 165 aa6.15□□□□□ -1.42
PTCH1-216ENST00000548379 RXRBP28702 533 aa6.15□□□□□ -1.42
PTCH1-216ENST00000548379 ZNF143P52747 638 aaPredicted RBP6.15□□□□□ -1.42
PTCH1-216ENST00000548379 CDK5R2Q13319 367 aa6.15□□□□□ -1.42
PTCH1-216ENST00000548379 GNPTABQ3T906 1256 aa6.15□□□□□ -1.42
PTCH1-216ENST00000548379 KIAA1211LQ6NV74 962 aa6.15□□□□□ -1.42
PTCH1-216ENST00000548379 PAOXQ6QHF9 649 aa6.15□□□□□ -1.42
PTCH1-216ENST00000548379 FAM177A1Q8N128 213 aaPredicted RBP6.15□□□□□ -1.42
PTCH1-216ENST00000548379 LILRB2Q8N423 598 aa6.15□□□□□ -1.42
PTCH1-216ENST00000548379 ZNF513Q8N8E2 541 aaPredicted RBP6.15□□□□□ -1.42
PTCH1-216ENST00000548379 RNF141Q8WVD5 230 aa6.15□□□□□ -1.42
PTCH1-216ENST00000548379 RNPC3Q96LT9 517 aaKnown RBP6.15□□□□□ -1.42
PTCH1-216ENST00000548379 FBXL18Q96ME1 805 aa6.15□□□□□ -1.42
PTCH1-216ENST00000548379 KREMEN1Q96MU8 473 aa6.15□□□□□ -1.42
PTCH1-216ENST00000548379 DNAJC7Q99615 494 aa6.15□□□□□ -1.42
PTCH1-216ENST00000548379 DUSP23Q9BVJ7 150 aa6.15□□□□□ -1.42
PTCH1-216ENST00000548379 EPN3Q9H201 632 aa6.15□□□□□ -1.42
PTCH1-216ENST00000548379 LGR6Q9HBX8 967 aa6.15□□□□□ -1.42
PTCH1-216ENST00000548379 SHOXO15266 292 aa6.14□□□□□ -1.43
PTCH1-216ENST00000548379 SUSD5O60279 629 aa6.14□□□□□ -1.43
PTCH1-216ENST00000548379 ETV3P41162 512 aa6.14□□□□□ -1.43
PTCH1-216ENST00000548379 GATA4P43694 442 aa6.14□□□□□ -1.43
PTCH1-216ENST00000548379 RASSF7Q02833 373 aa6.14□□□□□ -1.43
PTCH1-216ENST00000548379 NFKBIBQ15653 356 aa6.14□□□□□ -1.43
PTCH1-216ENST00000548379 SLC10A6Q3KNW5 377 aa6.14□□□□□ -1.43
PTCH1-216ENST00000548379 AXDND1Q5T1B0 1012 aaPredicted RBP6.14□□□□□ -1.43
PTCH1-216ENST00000548379 EEPD1Q7L9B9 569 aa6.14□□□□□ -1.43
PTCH1-216ENST00000548379 CDH24Q86UP0 819 aa6.14□□□□□ -1.43
PTCH1-216ENST00000548379 TOP6BLQ8N6T0 577 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms