RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 SPP2Q13103 211 aa20.56■□□□□ 0.88
HDAC7-227ENST00000548080 SEPT2Q15019 361 aa20.56■□□□□ 0.88
HDAC7-227ENST00000548080 IFNL1Q8IU54 200 aa20.56■□□□□ 0.88
HDAC7-227ENST00000548080 GADL1Q6ZQY3 521 aa20.55■□□□□ 0.88
HDAC7-227ENST00000548080 HSCBQ8IWL3 235 aa20.55■□□□□ 0.88
HDAC7-227ENST00000548080 TM6SF1Q9BZW5 370 aa20.55■□□□□ 0.88
HDAC7-227ENST00000548080 ST18O60284 1047 aa20.54■□□□□ 0.88
HDAC7-227ENST00000548080 CETPP11597 493 aa20.54■□□□□ 0.88
HDAC7-227ENST00000548080 RASA1P20936 1047 aa20.54■□□□□ 0.88
HDAC7-227ENST00000548080 NEK4P51957 841 aa20.54■□□□□ 0.88
HDAC7-227ENST00000548080 MOGSQ13724 837 aa20.54■□□□□ 0.88
HDAC7-227ENST00000548080 ALX1Q15699 326 aa20.54■□□□□ 0.88
HDAC7-227ENST00000548080 ZYXQ15942 572 aaKnown RBP20.54■□□□□ 0.88
HDAC7-227ENST00000548080 FAM43AQ8N2R8 423 aa20.54■□□□□ 0.88
HDAC7-227ENST00000548080 R3HDMLQ9H3Y0 253 aa20.54■□□□□ 0.88
HDAC7-227ENST00000548080 MKNK2Q9HBH9 465 aa20.54■□□□□ 0.88
HDAC7-227ENST00000548080 CABP5Q9NP86 173 aa20.54■□□□□ 0.88
HDAC7-227ENST00000548080 BTBD19C9JJ37 291 aa20.53■□□□□ 0.88
HDAC7-227ENST00000548080 TBC1D8O95759 1140 aa20.53■□□□□ 0.88
HDAC7-227ENST00000548080 PSMA5P28066 241 aa20.53■□□□□ 0.88
HDAC7-227ENST00000548080 SLC4A3P48751 1232 aa20.53■□□□□ 0.88
HDAC7-227ENST00000548080 HMGCS2P54868 508 aa20.53■□□□□ 0.88
HDAC7-227ENST00000548080 KRT32Q14532 448 aa20.53■□□□□ 0.88
HDAC7-227ENST00000548080 ZNF280CQ8ND82 737 aa20.53■□□□□ 0.88
HDAC7-227ENST00000548080 TESPA1A2RU30 521 aaPredicted RBP20.52■□□□□ 0.88
HDAC7-227ENST00000548080 CXCL11O14625 94 aa20.52■□□□□ 0.88
HDAC7-227ENST00000548080 CYP21A2P08686 494 aa20.52■□□□□ 0.88
HDAC7-227ENST00000548080 MTMR2Q13614 643 aa20.52■□□□□ 0.88
HDAC7-227ENST00000548080 ACER1Q8TDN7 264 aa20.52■□□□□ 0.88
HDAC7-227ENST00000548080 JAKMIP1Q96N16 626 aaKnown RBP20.52■□□□□ 0.88
HDAC7-227ENST00000548080 A0A0G2JLL6 359 aaPredicted RBP20.51■□□□□ 0.87
HDAC7-227ENST00000548080 CD2BP2O95400 341 aaKnown RBP20.51■□□□□ 0.87
HDAC7-227ENST00000548080 HSPA8P11142 646 aaKnown RBP20.51■□□□□ 0.87
HDAC7-227ENST00000548080 INHBEP58166 350 aa20.51■□□□□ 0.87
HDAC7-227ENST00000548080 ADCK5Q3MIX3 580 aa20.51■□□□□ 0.87
HDAC7-227ENST00000548080 PRRT2Q7Z6L0 340 aaPredicted RBP20.51■□□□□ 0.87
HDAC7-227ENST00000548080 REM2Q8IYK8 340 aaPredicted RBP20.51■□□□□ 0.87
HDAC7-227ENST00000548080 NBPF3Q9H094 633 aa20.51■□□□□ 0.87
HDAC7-227ENST00000548080 AS3MTQ9HBK9 375 aa20.51■□□□□ 0.87
HDAC7-227ENST00000548080 LAMA4Q16363 1823 aa20.51■□□□□ 0.87
HDAC7-227ENST00000548080 CASTP20810 708 aaKnown RBP20.5■□□□□ 0.87
HDAC7-227ENST00000548080 LBX1P52954 281 aa20.5■□□□□ 0.87
HDAC7-227ENST00000548080 IMMTQ16891 758 aaKnown RBP20.5■□□□□ 0.87
HDAC7-227ENST00000548080 FAM47AQ5JRC9 791 aa20.5■□□□□ 0.87
HDAC7-227ENST00000548080 UPF3BQ9BZI7 483 aaKnown RBP20.5■□□□□ 0.87
HDAC7-227ENST00000548080 ZSWIM6Q9HCJ5 1215 aa20.5■□□□□ 0.87
HDAC7-227ENST00000548080 TAF6LQ9Y6J9 622 aa20.5■□□□□ 0.87
HDAC7-227ENST00000548080 ZMYM6O95789 1325 aa20.5■□□□□ 0.87
HDAC7-227ENST00000548080 LOC285556D6RIA3 1793 aa20.5■□□□□ 0.87
HDAC7-227ENST00000548080 ATP2B2Q01814 1243 aa20.5■□□□□ 0.87
HDAC7-227ENST00000548080 TREML2Q5T2D2 321 aa20.5■□□□□ 0.87
HDAC7-227ENST00000548080 GPAT2Q6NUI2 795 aa20.5■□□□□ 0.87
HDAC7-227ENST00000548080 TMEM179Q6ZVK1 233 aa20.5■□□□□ 0.87
HDAC7-227ENST00000548080 TBC1D10CQ8IV04 446 aa20.5■□□□□ 0.87
HDAC7-227ENST00000548080 WDR18Q9BV38 432 aa20.5■□□□□ 0.87
HDAC7-227ENST00000548080 TOMM22Q9NS69 142 aa20.5■□□□□ 0.87
HDAC7-227ENST00000548080 GINM1Q9NU53 330 aa20.5■□□□□ 0.87
HDAC7-227ENST00000548080 CYP46A1Q9Y6A2 500 aa20.5■□□□□ 0.87
HDAC7-227ENST00000548080 GREB1LQ9C091 1923 aaPredicted RBP20.49■□□□□ 0.87
HDAC7-227ENST00000548080 SLC3A2P08195 630 aaKnown RBP20.49■□□□□ 0.87
HDAC7-227ENST00000548080 PDE4BQ07343 736 aa20.49■□□□□ 0.87
HDAC7-227ENST00000548080 TAF1CQ15572 869 aaPredicted RBP20.49■□□□□ 0.87
HDAC7-227ENST00000548080 RRP12Q5JTH9 1297 aaKnown RBP20.49■□□□□ 0.87
HDAC7-227ENST00000548080 CCDC17Q96LX7 622 aa20.49■□□□□ 0.87
HDAC7-227ENST00000548080 FEZ1Q99689 392 aa20.49■□□□□ 0.87
HDAC7-227ENST00000548080 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.49■□□□□ 0.87
HDAC7-227ENST00000548080 ANAPC4Q9UJX5 808 aa20.49■□□□□ 0.87
HDAC7-227ENST00000548080 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.49■□□□□ 0.87
HDAC7-227ENST00000548080 CASP8AP2Q9UKL3 1982 aa20.48■□□□□ 0.87
HDAC7-227ENST00000548080 A0A1W2PRG0 241 aa20.48■□□□□ 0.87
HDAC7-227ENST00000548080 USP17L10C9JJH3 530 aa20.48■□□□□ 0.87
HDAC7-227ENST00000548080 K7ELQ4 463 aaPredicted RBP20.48■□□□□ 0.87
HDAC7-227ENST00000548080 PDHXO00330 501 aa20.48■□□□□ 0.87
HDAC7-227ENST00000548080 CTCFP49711 727 aaPredicted RBP20.48■□□□□ 0.87
HDAC7-227ENST00000548080 MCM2P49736 904 aa20.48■□□□□ 0.87
HDAC7-227ENST00000548080 BACE1P56817 501 aa20.48■□□□□ 0.87
HDAC7-227ENST00000548080 ICA1Q05084 483 aa20.48■□□□□ 0.87
HDAC7-227ENST00000548080 CRHR2Q13324 411 aa20.48■□□□□ 0.87
HDAC7-227ENST00000548080 OTUD7BQ6GQQ9 843 aa20.48■□□□□ 0.87
HDAC7-227ENST00000548080 RUFY3Q7L099 469 aa20.48■□□□□ 0.87
HDAC7-227ENST00000548080 ZNF444Q8N0Y2 327 aaPredicted RBP20.48■□□□□ 0.87
HDAC7-227ENST00000548080 NKX2-3Q8TAU0 364 aa20.48■□□□□ 0.87
HDAC7-227ENST00000548080 ZNF213O14771 459 aa20.47■□□□□ 0.87
HDAC7-227ENST00000548080 BLOC1S2Q6QNY1 142 aa20.47■□□□□ 0.87
HDAC7-227ENST00000548080 SIAH1Q8IUQ4 282 aa20.47■□□□□ 0.87
HDAC7-227ENST00000548080 TTC14Q96N46 770 aa20.47■□□□□ 0.87
HDAC7-227ENST00000548080 NEK1Q96PY6 1258 aa20.47■□□□□ 0.87
HDAC7-227ENST00000548080 SAGE1Q9NXZ1 904 aa20.47■□□□□ 0.87
HDAC7-227ENST00000548080 E7EWF7 191 aa20.46■□□□□ 0.87
HDAC7-227ENST00000548080 CA12O43570 354 aa20.46■□□□□ 0.87
HDAC7-227ENST00000548080 TFAP4Q01664 338 aa20.46■□□□□ 0.87
HDAC7-227ENST00000548080 STOX1Q6ZVD7 989 aa20.46■□□□□ 0.87
HDAC7-227ENST00000548080 FASTKD5Q7L8L6 764 aaKnown RBP20.46■□□□□ 0.87
HDAC7-227ENST00000548080 ANKRD23Q86SG2 305 aa20.46■□□□□ 0.87
HDAC7-227ENST00000548080 EMILIN3Q9NT22 766 aa20.46■□□□□ 0.87
HDAC7-227ENST00000548080 PDRG1Q9NUG6 133 aa20.46■□□□□ 0.87
HDAC7-227ENST00000548080 TAOK2Q9UL54 1235 aa20.46■□□□□ 0.87
HDAC7-227ENST00000548080 NEDD4P46934 1319 aa20.45■□□□□ 0.86
HDAC7-227ENST00000548080 RANBP6O60518 1105 aaKnown RBP20.45■□□□□ 0.86
HDAC7-227ENST00000548080 ALDH1A1P00352 501 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms