RNA–Protein interactions for RNA: ENST00000547310.1

LGR5-204, Transcript of leucine rich repeat containing G protein-coupled receptor 5, human

TSL 3

Gene LGR5, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LGR5-204	ENST00000547310	SLC23A3	Q6PIS1	610 aa		7.49	□□□□□ -1.21
LGR5-204	ENST00000547310	ZNF507	Q8TCN5	953 aa		7.49	□□□□□ -1.21
LGR5-204	ENST00000547310	JARID2	Q92833	1246 aa	Predicted RBP	7.49	□□□□□ -1.21
LGR5-204	ENST00000547310	DDX41	Q9UJV9	622 aa	Known RBP	7.49	□□□□□ -1.21
LGR5-204	ENST00000547310	HOXA5	P20719	270 aa		7.48	□□□□□ -1.21
LGR5-204	ENST00000547310	USP48	Q86UV5	1035 aa		7.48	□□□□□ -1.21
LGR5-204	ENST00000547310	ZNF296	Q8WUU4	475 aa	Predicted RBP	7.48	□□□□□ -1.21
LGR5-204	ENST00000547310	NT5C1A	Q9BXI3	368 aa		7.48	□□□□□ -1.21
LGR5-204	ENST00000547310	DAGLA	Q9Y4D2	1042 aa		7.48	□□□□□ -1.21
LGR5-204	ENST00000547310	CSAD	Q9Y600	493 aa		7.48	□□□□□ -1.21
LGR5-204	ENST00000547310	NFIB	O00712	420 aa		7.47	□□□□□ -1.21
LGR5-204	ENST00000547310	DYNC1LI2	O43237	492 aa	Predicted RBP	7.47	□□□□□ -1.21
LGR5-204	ENST00000547310	RNGTT	O60942	597 aa	Known RBP	7.47	□□□□□ -1.21
LGR5-204	ENST00000547310	BPNT1	O95861	308 aa		7.47	□□□□□ -1.21
LGR5-204	ENST00000547310	RBM25	P49756	843 aa	Known RBP	7.47	□□□□□ -1.21
LGR5-204	ENST00000547310	FAM160A1	Q05DH4	1040 aa		7.47	□□□□□ -1.21
LGR5-204	ENST00000547310	ADAM30	Q9UKF2	790 aa		7.47	□□□□□ -1.21
LGR5-204	ENST00000547310	RACK1	P63244	317 aa	Known RBP	7.46	□□□□□ -1.22
LGR5-204	ENST00000547310	PDE4B	Q07343	736 aa		7.46	□□□□□ -1.22
LGR5-204	ENST00000547310	CDC37L1	Q7L3B6	337 aa		7.46	□□□□□ -1.22
LGR5-204	ENST00000547310	REC114	Q7Z4M0	266 aa		7.46	□□□□□ -1.22
LGR5-204	ENST00000547310	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	7.46	□□□□□ -1.22
LGR5-204	ENST00000547310	PLD6	Q8N2A8	252 aa	Known RBP	7.46	□□□□□ -1.22
LGR5-204	ENST00000547310	LIN37	Q96GY3	246 aa	Predicted RBP	7.46	□□□□□ -1.22
LGR5-204	ENST00000547310	PICK1	Q9NRD5	415 aa		7.46	□□□□□ -1.22
LGR5-204	ENST00000547310	IGSF5	Q9NSI5	407 aa		7.46	□□□□□ -1.22
LGR5-204	ENST00000547310	PRAMEF27	A3QJZ7	478 aa		7.45	□□□□□ -1.22
LGR5-204	ENST00000547310		E9PSI1	815 aa		7.45	□□□□□ -1.22
LGR5-204	ENST00000547310	GRK4	P32298	578 aa		7.45	□□□□□ -1.22
LGR5-204	ENST00000547310	SLBP	Q14493	270 aa	Known RBP eCLIP	7.45	□□□□□ -1.22
LGR5-204	ENST00000547310	ZNF394	Q53GI3	561 aa		7.45	□□□□□ -1.22
LGR5-204	ENST00000547310	TMEM201	Q5SNT2	666 aa		7.45	□□□□□ -1.22
LGR5-204	ENST00000547310	NT5DC4	Q86YG4	428 aa		7.45	□□□□□ -1.22
LGR5-204	ENST00000547310	KIAA0825	Q8IV33	1275 aa		7.45	□□□□□ -1.22
LGR5-204	ENST00000547310	HID1	Q8IV36	788 aa		7.45	□□□□□ -1.22
LGR5-204	ENST00000547310	ZNF654	Q8IZM8	581 aa		7.45	□□□□□ -1.22
LGR5-204	ENST00000547310	SPON2	Q9BUD6	331 aa		7.45	□□□□□ -1.22
LGR5-204	ENST00000547310	LRIG2	O94898	1065 aa		7.44	□□□□□ -1.22
LGR5-204	ENST00000547310	ATE1	O95260	518 aa		7.44	□□□□□ -1.22
LGR5-204	ENST00000547310	TCF3	P15923	654 aa		7.44	□□□□□ -1.22
LGR5-204	ENST00000547310	ETF1	P62495	437 aa	Known RBP	7.44	□□□□□ -1.22
LGR5-204	ENST00000547310	CWF19L2	Q2TBE0	894 aa	Known RBP	7.44	□□□□□ -1.22
LGR5-204	ENST00000547310	SLITRK4	Q8IW52	837 aa		7.44	□□□□□ -1.22
LGR5-204	ENST00000547310	MRPL41	Q8IXM3	137 aa	Known RBP	7.44	□□□□□ -1.22
LGR5-204	ENST00000547310	REXO1	Q8N1G1	1221 aa	Known RBP	7.44	□□□□□ -1.22
LGR5-204	ENST00000547310	TGIF2	Q9GZN2	237 aa		7.44	□□□□□ -1.22
LGR5-204	ENST00000547310	MKNK2	Q9HBH9	465 aa		7.44	□□□□□ -1.22
LGR5-204	ENST00000547310	SSU72	Q9NP77	194 aa	Known RBP	7.44	□□□□□ -1.22
LGR5-204	ENST00000547310	CRK	P46108	304 aa		7.43	□□□□□ -1.22
LGR5-204	ENST00000547310	RAD51AP2	Q09MP3	1159 aa		7.43	□□□□□ -1.22
LGR5-204	ENST00000547310	UBE3D	Q7Z6J8	389 aa		7.43	□□□□□ -1.22
LGR5-204	ENST00000547310	FBXO27	Q8NI29	283 aa		7.43	□□□□□ -1.22
LGR5-204	ENST00000547310	EAF1	Q96JC9	268 aa	Predicted RBP	7.43	□□□□□ -1.22
LGR5-204	ENST00000547310	EHMT1	Q9H9B1	1298 aa		7.43	□□□□□ -1.22
LGR5-204	ENST00000547310	FBRS	Q9HAH7	460 aa		7.43	□□□□□ -1.22
LGR5-204	ENST00000547310	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	7.43	□□□□□ -1.22
LGR5-204	ENST00000547310	PCDHGB7	Q9Y5F8	929 aa		7.43	□□□□□ -1.22
LGR5-204	ENST00000547310	PGR	P06401	933 aa		7.42	□□□□□ -1.22
LGR5-204	ENST00000547310	CD96	P40200	585 aa		7.42	□□□□□ -1.22
LGR5-204	ENST00000547310	ANGEL2	Q5VTE6	544 aa	Known RBP	7.42	□□□□□ -1.22
LGR5-204	ENST00000547310	SLC6A19	Q695T7	634 aa		7.42	□□□□□ -1.22
LGR5-204	ENST00000547310	PRR23B	Q6ZRT6	265 aa		7.42	□□□□□ -1.22
LGR5-204	ENST00000547310	ARMCX6	Q7L4S7	300 aa		7.42	□□□□□ -1.22
LGR5-204	ENST00000547310	MCAT	Q8IVS2	390 aa	Known RBP	7.42	□□□□□ -1.22
LGR5-204	ENST00000547310	MFSD2A	Q8NA29	543 aa		7.42	□□□□□ -1.22
LGR5-204	ENST00000547310	SPATA32	Q96LK8	384 aa		7.42	□□□□□ -1.22
LGR5-204	ENST00000547310	DUSP23	Q9BVJ7	150 aa		7.42	□□□□□ -1.22
LGR5-204	ENST00000547310	FOXQ1	Q9C009	403 aa		7.42	□□□□□ -1.22
LGR5-204	ENST00000547310	UBP1	Q9NZI7	540 aa		7.42	□□□□□ -1.22
LGR5-204	ENST00000547310	TJP2	Q9UDY2	1190 aa		7.42	□□□□□ -1.22
LGR5-204	ENST00000547310	NPIPB6	E9PJ23	425 aa		7.41	□□□□□ -1.22
LGR5-204	ENST00000547310	CST3	P01034	146 aa	Predicted RBP	7.41	□□□□□ -1.22
LGR5-204	ENST00000547310	APOBR	Q0VD83	1088 aa		7.41	□□□□□ -1.22
LGR5-204	ENST00000547310	CDK5R2	Q13319	367 aa		7.41	□□□□□ -1.22
LGR5-204	ENST00000547310	NKG7	Q16617	165 aa		7.41	□□□□□ -1.22
LGR5-204	ENST00000547310	IFI16	Q16666	785 aa	Known RBP	7.41	□□□□□ -1.22
LGR5-204	ENST00000547310	AOC3	Q16853	763 aa		7.41	□□□□□ -1.22
LGR5-204	ENST00000547310	PRDM10	Q9NQV6	1147 aa		7.41	□□□□□ -1.22
LGR5-204	ENST00000547310	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	7.41	□□□□□ -1.22
LGR5-204	ENST00000547310	FOXD2	O60548	495 aa	Predicted RBP	7.4	□□□□□ -1.22
LGR5-204	ENST00000547310	HTR3B	O95264	441 aa		7.4	□□□□□ -1.22
LGR5-204	ENST00000547310	GLI1	P08151	1106 aa		7.4	□□□□□ -1.22
LGR5-204	ENST00000547310	AFM	P43652	599 aa		7.4	□□□□□ -1.22
LGR5-204	ENST00000547310	GJA8	P48165	433 aa		7.4	□□□□□ -1.22
LGR5-204	ENST00000547310	FBXO15	Q8NCQ5	510 aa	Predicted RBP	7.4	□□□□□ -1.22
LGR5-204	ENST00000547310	RASGRP4	Q8TDF6	673 aa		7.4	□□□□□ -1.22
LGR5-204	ENST00000547310	ACSF2	Q96CM8	615 aa	Predicted RBP	7.4	□□□□□ -1.22
LGR5-204	ENST00000547310	TMEM87B	Q96K49	555 aa		7.4	□□□□□ -1.22
LGR5-204	ENST00000547310	HRASLS5	Q96KN8	279 aa		7.4	□□□□□ -1.22
LGR5-204	ENST00000547310	LGR6	Q9HBX8	967 aa		7.4	□□□□□ -1.22
LGR5-204	ENST00000547310	CD320	Q9NPF0	282 aa		7.4	□□□□□ -1.22
LGR5-204	ENST00000547310	CORIN	Q9Y5Q5	1042 aa		7.4	□□□□□ -1.22
LGR5-204	ENST00000547310	PSPN	O60542	156 aa		7.39	□□□□□ -1.23
LGR5-204	ENST00000547310	FAM87A	P0C7U9	286 aa		7.39	□□□□□ -1.23
LGR5-204	ENST00000547310	PLCG1	P19174	1290 aa		7.39	□□□□□ -1.23
LGR5-204	ENST00000547310	ZNF165	P49910	485 aa		7.39	□□□□□ -1.23
LGR5-204	ENST00000547310	COL9A2	Q14055	689 aa	Predicted RBP	7.39	□□□□□ -1.23
LGR5-204	ENST00000547310	KCNA10	Q16322	511 aa		7.39	□□□□□ -1.23
LGR5-204	ENST00000547310	C9orf131	Q5VYM1	1079 aa		7.39	□□□□□ -1.23
LGR5-204	ENST00000547310	CIAPIN1	Q6FI81	312 aa		7.39	□□□□□ -1.23

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