RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 EXOC1Q9NV70 894 aa9.7□□□□□ -0.86
CLIP1-218ENST00000545889 MCAMP43121 646 aa9.7□□□□□ -0.86
CLIP1-218ENST00000545889 MAP3K11Q16584 847 aa9.7□□□□□ -0.86
CLIP1-218ENST00000545889 SUPT20HL1Q3ZLR7 823 aa9.7□□□□□ -0.86
CLIP1-218ENST00000545889 AKNAD1Q5T1N1 836 aa9.7□□□□□ -0.86
CLIP1-218ENST00000545889 ZNF589Q86UQ0 364 aaPredicted RBP9.7□□□□□ -0.86
CLIP1-218ENST00000545889 HOMEZQ8IX15 550 aa9.7□□□□□ -0.86
CLIP1-218ENST00000545889 SDR42E1Q8WUS8 393 aa9.7□□□□□ -0.86
CLIP1-218ENST00000545889 TMX3Q96JJ7 454 aa9.7□□□□□ -0.86
CLIP1-218ENST00000545889 ALG1Q9BT22 464 aa9.7□□□□□ -0.86
CLIP1-218ENST00000545889 RIPOR2Q9Y4F9 1068 aa9.7□□□□□ -0.86
CLIP1-218ENST00000545889 RFX5P48382 616 aaPredicted RBP9.7□□□□□ -0.86
CLIP1-218ENST00000545889 LEKR1Q6ZMV7 388 aa9.7□□□□□ -0.86
CLIP1-218ENST00000545889 Q6ZUG5 572 aa9.7□□□□□ -0.86
CLIP1-218ENST00000545889 C3orf67Q6ZVT6 689 aa9.7□□□□□ -0.86
CLIP1-218ENST00000545889 SPON1Q9HCB6 807 aa9.7□□□□□ -0.86
CLIP1-218ENST00000545889 LTBP4Q8N2S1 1624 aa9.7□□□□□ -0.86
CLIP1-218ENST00000545889 RXRAP19793 462 aa9.7□□□□□ -0.86
CLIP1-218ENST00000545889 DNA2P51530 1060 aa9.7□□□□□ -0.86
CLIP1-218ENST00000545889 MRPS9P82933 396 aaKnown RBP9.7□□□□□ -0.86
CLIP1-218ENST00000545889 ARMC9Q7Z3E5 817 aa9.7□□□□□ -0.86
CLIP1-218ENST00000545889 USP40Q9NVE5 1235 aa9.7□□□□□ -0.86
CLIP1-218ENST00000545889 SLC27A2O14975 620 aa9.69□□□□□ -0.86
CLIP1-218ENST00000545889 CSF1RP07333 972 aa9.69□□□□□ -0.86
CLIP1-218ENST00000545889 NACA2Q9H009 215 aa9.69□□□□□ -0.86
CLIP1-218ENST00000545889 SLIT2O94813 1529 aa9.69□□□□□ -0.86
CLIP1-218ENST00000545889 DKC1O60832 514 aaKnown RBP eCLIP9.69□□□□□ -0.86
CLIP1-218ENST00000545889 CCDC172P0C7W6 258 aa9.69□□□□□ -0.86
CLIP1-218ENST00000545889 NPR1P16066 1061 aa9.69□□□□□ -0.86
CLIP1-218ENST00000545889 CCNA1P78396 465 aa9.69□□□□□ -0.86
CLIP1-218ENST00000545889 KRBA2Q6ZNG9 492 aa9.69□□□□□ -0.86
CLIP1-218ENST00000545889 MAPKAPK5Q8IW41 473 aa9.69□□□□□ -0.86
CLIP1-218ENST00000545889 HACE1Q8IYU2 909 aa9.69□□□□□ -0.86
CLIP1-218ENST00000545889 SNX14Q9Y5W7 946 aa9.69□□□□□ -0.86
CLIP1-218ENST00000545889 RAD50Q92878 1312 aa9.69□□□□□ -0.86
CLIP1-218ENST00000545889 A0A0G2JLW4 131 aa9.69□□□□□ -0.86
CLIP1-218ENST00000545889 B4E1Z4 1266 aa9.69□□□□□ -0.86
CLIP1-218ENST00000545889 TCP10L2B9ZVM9 353 aa9.69□□□□□ -0.86
CLIP1-218ENST00000545889 AK2P54819 239 aa9.69□□□□□ -0.86
CLIP1-218ENST00000545889 SLC8A3P57103 927 aa9.69□□□□□ -0.86
CLIP1-218ENST00000545889 CTDSPL2Q05D32 466 aa9.69□□□□□ -0.86
CLIP1-218ENST00000545889 FSIP1Q8NA03 581 aa9.69□□□□□ -0.86
CLIP1-218ENST00000545889 RNF169Q8NCN4 708 aa9.69□□□□□ -0.86
CLIP1-218ENST00000545889 PIH1D3Q9NQM4 214 aaKnown RBP9.69□□□□□ -0.86
CLIP1-218ENST00000545889 DNM2P50570 870 aa9.68□□□□□ -0.86
CLIP1-218ENST00000545889 CAMK4Q16566 473 aa9.68□□□□□ -0.86
CLIP1-218ENST00000545889 IQCEQ6IPM2 695 aa9.68□□□□□ -0.86
CLIP1-218ENST00000545889 DPP9Q86TI2 863 aa9.68□□□□□ -0.86
CLIP1-218ENST00000545889 GLG1Q92896 1179 aa9.68□□□□□ -0.86
CLIP1-218ENST00000545889 MASTLQ96GX5 879 aa9.68□□□□□ -0.86
CLIP1-218ENST00000545889 ANO10Q9NW15 660 aa9.68□□□□□ -0.86
CLIP1-218ENST00000545889 TFIP11Q9UBB9 837 aaKnown RBP9.68□□□□□ -0.86
CLIP1-218ENST00000545889 COL14A1Q05707 1796 aaKnown RBP9.68□□□□□ -0.86
CLIP1-218ENST00000545889 UTYO14607 1347 aa9.68□□□□□ -0.86
CLIP1-218ENST00000545889 PLA2G12BQ9BX93 195 aa9.68□□□□□ -0.86
CLIP1-218ENST00000545889 LEMD3Q9Y2U8 911 aa9.68□□□□□ -0.86
CLIP1-218ENST00000545889 LMAN1P49257 510 aa9.68□□□□□ -0.86
CLIP1-218ENST00000545889 HNRNPH2P55795 449 aaKnown RBP9.68□□□□□ -0.86
CLIP1-218ENST00000545889 APOBRQ0VD83 1088 aa9.68□□□□□ -0.86
CLIP1-218ENST00000545889 DIXDC1Q155Q3 683 aa9.68□□□□□ -0.86
CLIP1-218ENST00000545889 ZNF827Q17R98 1081 aa9.68□□□□□ -0.86
CLIP1-218ENST00000545889 CTR9Q6PD62 1173 aa9.68□□□□□ -0.86
CLIP1-218ENST00000545889 FAM114A1Q8IWE2 563 aa9.68□□□□□ -0.86
CLIP1-218ENST00000545889 TRIM47Q96LD4 638 aa9.68□□□□□ -0.86
CLIP1-218ENST00000545889 STAT6P42226 847 aa9.68□□□□□ -0.86
CLIP1-218ENST00000545889 ASIC1P78348 528 aa9.68□□□□□ -0.86
CLIP1-218ENST00000545889 TERF2Q15554 542 aa9.68□□□□□ -0.86
CLIP1-218ENST00000545889 KANK3Q6NY19 840 aa9.68□□□□□ -0.86
CLIP1-218ENST00000545889 TGFBRAP1Q8WUH2 860 aa9.68□□□□□ -0.86
CLIP1-218ENST00000545889 OSBP2Q969R2 916 aa9.68□□□□□ -0.86
CLIP1-218ENST00000545889 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.68□□□□□ -0.86
CLIP1-218ENST00000545889 RTL9Q8NET4 1388 aa9.68□□□□□ -0.86
CLIP1-218ENST00000545889 SF3B3Q15393 1217 aaKnown RBP9.67□□□□□ -0.86
CLIP1-218ENST00000545889 E2F4Q16254 413 aa9.67□□□□□ -0.86
CLIP1-218ENST00000545889 CCDC93Q567U6 631 aa9.67□□□□□ -0.86
CLIP1-218ENST00000545889 CHURC1Q8WUH1 139 aa9.67□□□□□ -0.86
CLIP1-218ENST00000545889 BRIP1Q9BX63 1249 aa9.67□□□□□ -0.86
CLIP1-218ENST00000545889 PUS7LQ9H0K6 701 aaKnown RBP9.67□□□□□ -0.86
CLIP1-218ENST00000545889 TMCO5BA8MYB1 307 aa9.67□□□□□ -0.86
CLIP1-218ENST00000545889 USO1O60763 962 aaKnown RBP9.67□□□□□ -0.86
CLIP1-218ENST00000545889 RAD17O75943 681 aa9.67□□□□□ -0.86
CLIP1-218ENST00000545889 HSPD1P10809 573 aaKnown RBP9.67□□□□□ -0.86
CLIP1-218ENST00000545889 CASP7P55210 303 aa9.67□□□□□ -0.86
CLIP1-218ENST00000545889 DYNLL1P63167 89 aaKnown RBP9.67□□□□□ -0.86
CLIP1-218ENST00000545889 RASEFQ8IZ41 740 aa9.67□□□□□ -0.86
CLIP1-218ENST00000545889 TTLL6Q8N841 843 aa9.67□□□□□ -0.86
CLIP1-218ENST00000545889 CEP83Q9Y592 693 aa9.67□□□□□ -0.86
CLIP1-218ENST00000545889 TRPM3Q9HCF6 1732 aaPredicted RBP9.67□□□□□ -0.86
CLIP1-218ENST00000545889 ALS2Q96Q42 1657 aa9.67□□□□□ -0.86
CLIP1-218ENST00000545889 TRIM75PA6NK02 468 aa9.67□□□□□ -0.86
CLIP1-218ENST00000545889 PRKAB2O43741 272 aa9.67□□□□□ -0.86
CLIP1-218ENST00000545889 CFBP00751 764 aa9.67□□□□□ -0.86
CLIP1-218ENST00000545889 ANKRD35Q8N283 1001 aa9.67□□□□□ -0.86
CLIP1-218ENST00000545889 NEK11Q8NG66 645 aa9.67□□□□□ -0.86
CLIP1-218ENST00000545889 TBC1D5Q92609 795 aa9.67□□□□□ -0.86
CLIP1-218ENST00000545889 EFCC1Q9HA90 598 aa9.67□□□□□ -0.86
CLIP1-218ENST00000545889 GOPCQ9HD26 462 aa9.67□□□□□ -0.86
CLIP1-218ENST00000545889 MRVI1Q9Y6F6 885 aa9.67□□□□□ -0.86
CLIP1-218ENST00000545889 PXDNLA1KZ92 1463 aa9.67□□□□□ -0.86
CLIP1-218ENST00000545889 CYP2E1P05181 493 aaPredicted RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms