RNA–Protein interactions for RNA: ENST00000545807.6

NECAP1-208, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,113 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-208ENST00000545807 ABCF2Q9UG63 623 aa7.57□□□□□ -1.2
NECAP1-208ENST00000545807 NARFQ9UHQ1 456 aa7.57□□□□□ -1.2
NECAP1-208ENST00000545807 NUP98P52948 1817 aa7.57□□□□□ -1.2
NECAP1-208ENST00000545807 TAF1P21675 1872 aa7.57□□□□□ -1.2
NECAP1-208ENST00000545807 PDE8BO95263 885 aa7.57□□□□□ -1.2
NECAP1-208ENST00000545807 ZNF24P17028 368 aa7.57□□□□□ -1.2
NECAP1-208ENST00000545807 DEUP1Q05D60 604 aa7.57□□□□□ -1.2
NECAP1-208ENST00000545807 NFIXQ14938 502 aa7.57□□□□□ -1.2
NECAP1-208ENST00000545807 TXNRD1Q16881 649 aa7.57□□□□□ -1.2
NECAP1-208ENST00000545807 PARP10Q53GL7 1025 aa7.57□□□□□ -1.2
NECAP1-208ENST00000545807 CHST3Q7LGC8 479 aa7.57□□□□□ -1.2
NECAP1-208ENST00000545807 OGFOD1Q8N543 542 aa7.57□□□□□ -1.2
NECAP1-208ENST00000545807 MAGEC3Q8TD91 643 aa7.57□□□□□ -1.2
NECAP1-208ENST00000545807 TRIM7Q9C029 511 aa7.57□□□□□ -1.2
NECAP1-208ENST00000545807 CD248Q9HCU0 757 aa7.57□□□□□ -1.2
NECAP1-208ENST00000545807 BATF3Q9NR55 127 aa7.57□□□□□ -1.2
NECAP1-208ENST00000545807 SNX14Q9Y5W7 946 aa7.57□□□□□ -1.2
NECAP1-208ENST00000545807 PDLIM1O00151 329 aa7.56□□□□□ -1.2
NECAP1-208ENST00000545807 RXRBP28702 533 aa7.56□□□□□ -1.2
NECAP1-208ENST00000545807 CHRNDQ07001 517 aa7.56□□□□□ -1.2
NECAP1-208ENST00000545807 IFT88Q13099 833 aa7.56□□□□□ -1.2
NECAP1-208ENST00000545807 STK3Q13188 491 aa7.56□□□□□ -1.2
NECAP1-208ENST00000545807 VPS37DQ86XT2 251 aa7.56□□□□□ -1.2
NECAP1-208ENST00000545807 FAM81AQ8TBF8 368 aa7.56□□□□□ -1.2
NECAP1-208ENST00000545807 HAUS7Q99871 368 aa7.56□□□□□ -1.2
NECAP1-208ENST00000545807 ATP6V0A4Q9HBG4 840 aa7.56□□□□□ -1.2
NECAP1-208ENST00000545807 UTP6Q9NYH9 597 aaKnown RBP7.56□□□□□ -1.2
NECAP1-208ENST00000545807 RGL1Q9NZL6 768 aa7.56□□□□□ -1.2
NECAP1-208ENST00000545807 ABCC12Q96J65 1359 aa7.56□□□□□ -1.2
NECAP1-208ENST00000545807 PAPPAQ13219 1627 aa7.56□□□□□ -1.2
NECAP1-208ENST00000545807 SPDYE3A6NKU9 549 aa7.56□□□□□ -1.2
NECAP1-208ENST00000545807 FSBPO95073 299 aa7.56□□□□□ -1.2
NECAP1-208ENST00000545807 KLRK1P26718 216 aa7.56□□□□□ -1.2
NECAP1-208ENST00000545807 MCAMP43121 646 aa7.56□□□□□ -1.2
NECAP1-208ENST00000545807 CCDC102BQ68D86 513 aa7.56□□□□□ -1.2
NECAP1-208ENST00000545807 TPTE2Q6XPS3 522 aa7.56□□□□□ -1.2
NECAP1-208ENST00000545807 CCAR2Q8N163 923 aaKnown RBP7.56□□□□□ -1.2
NECAP1-208ENST00000545807 PROM2Q8N271 834 aa7.56□□□□□ -1.2
NECAP1-208ENST00000545807 PHC3Q8NDX5 983 aa7.56□□□□□ -1.2
NECAP1-208ENST00000545807 UBXN4Q92575 508 aa7.56□□□□□ -1.2
NECAP1-208ENST00000545807 NLRP3Q96P20 1036 aa7.56□□□□□ -1.2
NECAP1-208ENST00000545807 TSGA10Q9BZW7 698 aa7.56□□□□□ -1.2
NECAP1-208ENST00000545807 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.56□□□□□ -1.2
NECAP1-208ENST00000545807 BIN2Q9UBW5 565 aaPredicted RBP7.56□□□□□ -1.2
NECAP1-208ENST00000545807 CDHR2Q9BYE9 1310 aa7.56□□□□□ -1.2
NECAP1-208ENST00000545807 NWD2Q9ULI1 1742 aa7.56□□□□□ -1.2
NECAP1-208ENST00000545807 EFCAB8A8MWE9 144 aa7.56□□□□□ -1.2
NECAP1-208ENST00000545807 OPA1O60313 960 aa7.56□□□□□ -1.2
NECAP1-208ENST00000545807 RHBDL3P58872 404 aa7.56□□□□□ -1.2
NECAP1-208ENST00000545807 APOBRQ0VD83 1088 aa7.56□□□□□ -1.2
NECAP1-208ENST00000545807 SLC4A8Q2Y0W8 1093 aa7.56□□□□□ -1.2
NECAP1-208ENST00000545807 SFMBT2Q5VUG0 894 aa7.56□□□□□ -1.2
NECAP1-208ENST00000545807 KCNN1Q92952 543 aa7.56□□□□□ -1.2
NECAP1-208ENST00000545807 PICK1Q9NRD5 415 aa7.56□□□□□ -1.2
NECAP1-208ENST00000545807 USP42Q9H9J4 1324 aaKnown RBP7.55□□□□□ -1.2
NECAP1-208ENST00000545807 GADD45BO75293 160 aaPredicted RBP7.55□□□□□ -1.2
NECAP1-208ENST00000545807 CIAO1O76071 339 aa7.55□□□□□ -1.2
NECAP1-208ENST00000545807 HSPA4P34932 840 aa7.55□□□□□ -1.2
NECAP1-208ENST00000545807 ZNF75DP51815 510 aa7.55□□□□□ -1.2
NECAP1-208ENST00000545807 FOSBP53539 338 aa7.55□□□□□ -1.2
NECAP1-208ENST00000545807 SLC9C2Q5TAH2 1124 aa7.55□□□□□ -1.2
NECAP1-208ENST00000545807 CREB3L3Q68CJ9 461 aa7.55□□□□□ -1.2
NECAP1-208ENST00000545807 CWF19L1Q69YN2 538 aaKnown RBP7.55□□□□□ -1.2
NECAP1-208ENST00000545807 POTEAQ6S8J7 498 aa7.55□□□□□ -1.2
NECAP1-208ENST00000545807 ILDR1Q86SU0 546 aaPredicted RBP7.55□□□□□ -1.2
NECAP1-208ENST00000545807 RAB11FIP4Q86YS3 637 aa7.55□□□□□ -1.2
NECAP1-208ENST00000545807 NECAB1Q8N987 351 aa7.55□□□□□ -1.2
NECAP1-208ENST00000545807 KBTBD3Q8NAB2 608 aa7.55□□□□□ -1.2
NECAP1-208ENST00000545807 PLA2G12BQ9BX93 195 aa7.55□□□□□ -1.2
NECAP1-208ENST00000545807 ARFGAP3Q9NP61 516 aa7.55□□□□□ -1.2
NECAP1-208ENST00000545807 RTEL1Q9NZ71 1219 aa7.55□□□□□ -1.2
NECAP1-208ENST00000545807 VPS18Q9P253 973 aa7.55□□□□□ -1.2
NECAP1-208ENST00000545807 NRBP1Q9UHY1 535 aa7.55□□□□□ -1.2
NECAP1-208ENST00000545807 TJP1Q07157 1748 aa7.55□□□□□ -1.2
NECAP1-208ENST00000545807 ZKSCAN1P17029 563 aaPredicted RBP7.55□□□□□ -1.2
NECAP1-208ENST00000545807 CNBD1Q8NA66 436 aa7.55□□□□□ -1.2
NECAP1-208ENST00000545807 MIGA1Q8NAN2 632 aa7.55□□□□□ -1.2
NECAP1-208ENST00000545807 LMBR1Q8WVP7 490 aa7.55□□□□□ -1.2
NECAP1-208ENST00000545807 EPAS1Q99814 870 aa7.55□□□□□ -1.2
NECAP1-208ENST00000545807 MMADHCQ9H3L0 296 aaPredicted RBP7.55□□□□□ -1.2
NECAP1-208ENST00000545807 PIH1D3Q9NQM4 214 aaKnown RBP7.55□□□□□ -1.2
NECAP1-208ENST00000545807 MYO6Q9UM54 1294 aa7.55□□□□□ -1.2
NECAP1-208ENST00000545807 FAM169AQ9Y6X4 670 aa7.55□□□□□ -1.2
NECAP1-208ENST00000545807 NUP188Q5SRE5 1749 aa7.55□□□□□ -1.2
NECAP1-208ENST00000545807 M0R2C6 588 aa7.54□□□□□ -1.2
NECAP1-208ENST00000545807 IPO5O00410 1097 aaKnown RBP7.54□□□□□ -1.2
NECAP1-208ENST00000545807 USP4Q13107 963 aa7.54□□□□□ -1.2
NECAP1-208ENST00000545807 KCNB1Q14721 858 aa7.54□□□□□ -1.2
NECAP1-208ENST00000545807 LRRC8AQ8IWT6 810 aa7.54□□□□□ -1.2
NECAP1-208ENST00000545807 GPR161Q8N6U8 529 aaKnown RBP7.54□□□□□ -1.2
NECAP1-208ENST00000545807 OSBP2Q969R2 916 aa7.54□□□□□ -1.2
NECAP1-208ENST00000545807 TMOD4Q9NZQ9 345 aa7.54□□□□□ -1.2
NECAP1-208ENST00000545807 ANKIB1Q9P2G1 1089 aa7.54□□□□□ -1.2
NECAP1-208ENST00000545807 G3BP2Q9UN86 482 aaKnown RBP7.54□□□□□ -1.2
NECAP1-208ENST00000545807 CNTNAP4Q9C0A0 1308 aa7.54□□□□□ -1.2
NECAP1-208ENST00000545807 LRRC10BA6NIK2 292 aa7.54□□□□□ -1.2
NECAP1-208ENST00000545807 ONECUT3O60422 494 aaPredicted RBP7.54□□□□□ -1.2
NECAP1-208ENST00000545807 SKAP2O75563 359 aaPredicted RBP7.54□□□□□ -1.2
NECAP1-208ENST00000545807 SLC5A1P13866 664 aa7.54□□□□□ -1.2
NECAP1-208ENST00000545807 GCLCP48506 637 aaPredicted RBP7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms