RNA–Protein interactions for RNA: ENST00000541990.5

THBS3-211, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 2,928 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-211ENST00000541990 C8orf76Q96K31 380 aa10.44□□□□□ -0.74
THBS3-211ENST00000541990 PLEKHA4Q9H4M7 779 aa10.44□□□□□ -0.74
THBS3-211ENST00000541990 PUF60Q9UHX1 559 aaKnown RBP10.44□□□□□ -0.74
THBS3-211ENST00000541990 MBD4O95243 580 aa10.43□□□□□ -0.74
THBS3-211ENST00000541990 FGAP02671 866 aa10.43□□□□□ -0.74
THBS3-211ENST00000541990 NOP2P46087 812 aaKnown RBP10.43□□□□□ -0.74
THBS3-211ENST00000541990 GRAPQ13588 217 aa10.43□□□□□ -0.74
THBS3-211ENST00000541990 SHC4Q6S5L8 630 aa10.43□□□□□ -0.74
THBS3-211ENST00000541990 LCORLQ8N3X6 602 aa10.43□□□□□ -0.74
THBS3-211ENST00000541990 GPR161Q8N6U8 529 aaKnown RBP10.43□□□□□ -0.74
THBS3-211ENST00000541990 GRAPLQ8TC17 118 aaPredicted RBP10.43□□□□□ -0.74
THBS3-211ENST00000541990 KCNG4Q8TDN1 519 aa10.43□□□□□ -0.74
THBS3-211ENST00000541990 PNKPQ96T60 521 aa10.43□□□□□ -0.74
THBS3-211ENST00000541990 SRRTQ9BXP5 876 aaKnown RBP10.43□□□□□ -0.74
THBS3-211ENST00000541990 VPS18Q9P253 973 aa10.43□□□□□ -0.74
THBS3-211ENST00000541990 RRP15Q9Y3B9 282 aaKnown RBP10.43□□□□□ -0.74
THBS3-211ENST00000541990 TAF1LQ8IZX4 1826 aa10.43□□□□□ -0.74
THBS3-211ENST00000541990 COL1A1P02452 1464 aaPredicted RBP10.43□□□□□ -0.74
THBS3-211ENST00000541990 DDX60Q8IY21 1712 aaKnown RBP10.43□□□□□ -0.74
THBS3-211ENST00000541990 MYL5Q02045 173 aa10.43□□□□□ -0.74
THBS3-211ENST00000541990 SPECC1Q5M775 1068 aa10.43□□□□□ -0.74
THBS3-211ENST00000541990 ATL3Q6DD88 541 aa10.43□□□□□ -0.74
THBS3-211ENST00000541990 TRMT44Q8IYL2 757 aaKnown RBP10.43□□□□□ -0.74
THBS3-211ENST00000541990 FBXO18Q8NFZ0 1043 aa10.43□□□□□ -0.74
THBS3-211ENST00000541990 POLR3EQ9NVU0 708 aa10.43□□□□□ -0.74
THBS3-211ENST00000541990 ANKRD36CQ5JPF3 1778 aa10.42□□□□□ -0.74
THBS3-211ENST00000541990 IKBKBO14920 756 aa10.42□□□□□ -0.74
THBS3-211ENST00000541990 DHX16O60231 1041 aaKnown RBP10.42□□□□□ -0.74
THBS3-211ENST00000541990 SLURP2P0DP57 97 aa10.42□□□□□ -0.74
THBS3-211ENST00000541990 ADRA2BP18089 450 aa10.42□□□□□ -0.74
THBS3-211ENST00000541990 TNNT3P45378 269 aaPredicted RBP10.42□□□□□ -0.74
THBS3-211ENST00000541990 CTDSPL2Q05D32 466 aa10.42□□□□□ -0.74
THBS3-211ENST00000541990 ANO1Q5XXA6 986 aa10.42□□□□□ -0.74
THBS3-211ENST00000541990 METTL16Q86W50 562 aaKnown RBP10.42□□□□□ -0.74
THBS3-211ENST00000541990 TC2NQ8N9U0 490 aa10.42□□□□□ -0.74
THBS3-211ENST00000541990 BAG1Q99933 345 aaPredicted RBP10.42□□□□□ -0.74
THBS3-211ENST00000541990 TSPYL1Q9H0U9 437 aa10.42□□□□□ -0.74
THBS3-211ENST00000541990 HPS5Q9UPZ3 1129 aa10.42□□□□□ -0.74
THBS3-211ENST00000541990 TNRC6CQ9HCJ0 1690 aaKnown RBP10.42□□□□□ -0.74
THBS3-211ENST00000541990 UBE2Q2LH0YL09 131 aa10.42□□□□□ -0.74
THBS3-211ENST00000541990 RXRAP19793 462 aa10.42□□□□□ -0.74
THBS3-211ENST00000541990 CYP7A1P22680 504 aa10.42□□□□□ -0.74
THBS3-211ENST00000541990 HIBADHP31937 336 aaKnown RBP10.42□□□□□ -0.74
THBS3-211ENST00000541990 ADD2P35612 726 aa10.42□□□□□ -0.74
THBS3-211ENST00000541990 FMR1Q06787 632 aaKnown RBP eCLIP10.42□□□□□ -0.74
THBS3-211ENST00000541990 CAVIN4Q5BKX8 364 aa10.42□□□□□ -0.74
THBS3-211ENST00000541990 ANKZF1Q9H8Y5 726 aa10.42□□□□□ -0.74
THBS3-211ENST00000541990 LY75O60449 1722 aa10.42□□□□□ -0.74
THBS3-211ENST00000541990 ARHGAP6O43182 974 aa10.41□□□□□ -0.74
THBS3-211ENST00000541990 ATP8B1O43520 1251 aa10.41□□□□□ -0.74
THBS3-211ENST00000541990 YEATS4O95619 227 aa10.41□□□□□ -0.74
THBS3-211ENST00000541990 ARID4AP29374 1257 aaPredicted RBP10.41□□□□□ -0.74
THBS3-211ENST00000541990 SYKP43405 635 aa10.41□□□□□ -0.74
THBS3-211ENST00000541990 KIF23Q02241 960 aaPredicted RBP10.41□□□□□ -0.74
THBS3-211ENST00000541990 NLGN1Q8N2Q7 840 aa10.41□□□□□ -0.74
THBS3-211ENST00000541990 CCDC12Q8WUD4 166 aaPredicted RBP10.41□□□□□ -0.74
THBS3-211ENST00000541990 LZTFL1Q9NQ48 299 aa10.41□□□□□ -0.74
THBS3-211ENST00000541990 STK32BQ9NY57 414 aa10.41□□□□□ -0.74
THBS3-211ENST00000541990 TUBE1Q9UJT0 475 aa10.41□□□□□ -0.74
THBS3-211ENST00000541990 TACC3Q9Y6A5 838 aa10.41□□□□□ -0.74
THBS3-211ENST00000541990 MYO5AQ9Y4I1 1855 aaKnown RBP10.41□□□□□ -0.74
THBS3-211ENST00000541990 C4AP0C0L4 1744 aa10.41□□□□□ -0.74
THBS3-211ENST00000541990 KLF18A0A0U1RQI7 1052 aa10.41□□□□□ -0.74
THBS3-211ENST00000541990 SOWAHDA6NJG2 315 aa10.41□□□□□ -0.74
THBS3-211ENST00000541990 GOLGA8BA8MQT2 603 aa10.41□□□□□ -0.74
THBS3-211ENST00000541990 MAP2K7O14733 419 aa10.41□□□□□ -0.74
THBS3-211ENST00000541990 PHACTR2O75167 634 aa10.41□□□□□ -0.74
THBS3-211ENST00000541990 GPS2Q13227 327 aa10.41□□□□□ -0.74
THBS3-211ENST00000541990 R3HDM1Q15032 1099 aaKnown RBP10.41□□□□□ -0.74
THBS3-211ENST00000541990 LONRF3Q496Y0 759 aa10.41□□□□□ -0.74
THBS3-211ENST00000541990 RRP12Q5JTH9 1297 aaKnown RBP10.41□□□□□ -0.74
THBS3-211ENST00000541990 GOLGA5Q8TBA6 731 aa10.41□□□□□ -0.74
THBS3-211ENST00000541990 AIDAQ96BJ3 306 aa10.41□□□□□ -0.74
THBS3-211ENST00000541990 ZNF274Q96GC6 653 aaPredicted RBP10.41□□□□□ -0.74
THBS3-211ENST00000541990 ZKSCAN3Q9BRR0 538 aa10.41□□□□□ -0.74
THBS3-211ENST00000541990 TOMM22Q9NS69 142 aa10.41□□□□□ -0.74
THBS3-211ENST00000541990 AATFQ9NY61 560 aaKnown RBP eCLIP10.41□□□□□ -0.74
THBS3-211ENST00000541990 FBXO3Q9UK99 471 aa10.41□□□□□ -0.74
THBS3-211ENST00000541990 FAN1Q9Y2M0 1017 aa10.41□□□□□ -0.74
THBS3-211ENST00000541990 CCP110O43303 1012 aa10.4□□□□□ -0.74
THBS3-211ENST00000541990 ZSCAN12O43309 604 aa10.4□□□□□ -0.74
THBS3-211ENST00000541990 PRDM1O75626 825 aa10.4□□□□□ -0.74
THBS3-211ENST00000541990 ABL1P00519 1130 aa10.4□□□□□ -0.74
THBS3-211ENST00000541990 TUBB4AP04350 444 aa10.4□□□□□ -0.74
THBS3-211ENST00000541990 CMA1P23946 247 aa10.4□□□□□ -0.74
THBS3-211ENST00000541990 ACTN2P35609 894 aa10.4□□□□□ -0.74
THBS3-211ENST00000541990 TBX2Q13207 712 aaPredicted RBP10.4□□□□□ -0.74
THBS3-211ENST00000541990 RABGGTAQ92696 567 aa10.4□□□□□ -0.74
THBS3-211ENST00000541990 GOLGA1Q92805 767 aa10.4□□□□□ -0.74
THBS3-211ENST00000541990 EXOC4Q96A65 974 aa10.4□□□□□ -0.74
THBS3-211ENST00000541990 MED15Q96RN5 788 aa10.4□□□□□ -0.74
THBS3-211ENST00000541990 DBNDD1Q9H9R9 158 aa10.4□□□□□ -0.74
THBS3-211ENST00000541990 SENP2Q9HC62 589 aa10.4□□□□□ -0.74
THBS3-211ENST00000541990 PCDHAC2Q9Y5I4 1007 aa10.4□□□□□ -0.74
THBS3-211ENST00000541990 HMGB1P09429 215 aaKnown RBP10.4□□□□□ -0.74
THBS3-211ENST00000541990 SRGNP10124 158 aa10.4□□□□□ -0.74
THBS3-211ENST00000541990 TXLNAP40222 546 aa10.4□□□□□ -0.74
THBS3-211ENST00000541990 BEND6Q5SZJ8 279 aaPredicted RBP10.4□□□□□ -0.74
THBS3-211ENST00000541990 PACS2Q86VP3 889 aa10.4□□□□□ -0.74
THBS3-211ENST00000541990 C2CD5Q86YS7 1000 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms