RNA–Protein interactions for RNA: ENST00000539469.6

PDZRN4-203, Transcript of PDZ domain containing ring finger 4, humanhuman

TSL 1 (best) BASIC

Gene PDZRN4, Length 3,041 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN4-203ENST00000539469 MAP4K1Q92918 833 aa7.13□□□□□ -1.27
PDZRN4-203ENST00000539469 ZC3H12CQ9C0D7 883 aaKnown RBP7.13□□□□□ -1.27
PDZRN4-203ENST00000539469 LMBRD1Q9NUN5 540 aa7.13□□□□□ -1.27
PDZRN4-203ENST00000539469 RBM8AQ9Y5S9 174 aaKnown RBP7.13□□□□□ -1.27
PDZRN4-203ENST00000539469 YDJCA8MPS7 323 aa7.13□□□□□ -1.27
PDZRN4-203ENST00000539469 GPAA1O43292 621 aa7.13□□□□□ -1.27
PDZRN4-203ENST00000539469 ZNF500O60304 480 aaPredicted RBP7.13□□□□□ -1.27
PDZRN4-203ENST00000539469 ECE2O60344 883 aa7.13□□□□□ -1.27
PDZRN4-203ENST00000539469 HSPD1P10809 573 aaKnown RBP7.13□□□□□ -1.27
PDZRN4-203ENST00000539469 PRELPP51888 382 aa7.13□□□□□ -1.27
PDZRN4-203ENST00000539469 GTF2IP78347 998 aa7.13□□□□□ -1.27
PDZRN4-203ENST00000539469 MAP3K12Q12852 859 aa7.13□□□□□ -1.27
PDZRN4-203ENST00000539469 METTL16Q86W50 562 aaKnown RBP7.13□□□□□ -1.27
PDZRN4-203ENST00000539469 CCDC94Q9BW85 323 aaPredicted RBP7.13□□□□□ -1.27
PDZRN4-203ENST00000539469 FHDC1Q9C0D6 1143 aaPredicted RBP7.13□□□□□ -1.27
PDZRN4-203ENST00000539469 COA1Q9GZY4 146 aa7.13□□□□□ -1.27
PDZRN4-203ENST00000539469 ZNF277Q9NRM2 450 aaPredicted RBP7.13□□□□□ -1.27
PDZRN4-203ENST00000539469 NFKBIEO00221 500 aa7.12□□□□□ -1.27
PDZRN4-203ENST00000539469 PRMT3O60678 531 aa7.12□□□□□ -1.27
PDZRN4-203ENST00000539469 MBD4O95243 580 aa7.12□□□□□ -1.27
PDZRN4-203ENST00000539469 DMTNQ08495 405 aa7.12□□□□□ -1.27
PDZRN4-203ENST00000539469 KIAA2012Q0VF49 1180 aa7.12□□□□□ -1.27
PDZRN4-203ENST00000539469 NECTIN1Q15223 517 aa7.12□□□□□ -1.27
PDZRN4-203ENST00000539469 DIXDC1Q155Q3 683 aa7.12□□□□□ -1.27
PDZRN4-203ENST00000539469 DALRD3Q5D0E6 543 aaKnown RBP7.12□□□□□ -1.27
PDZRN4-203ENST00000539469 ZSCAN25Q6NSZ9 544 aa7.12□□□□□ -1.27
PDZRN4-203ENST00000539469 EYA3Q99504 573 aa7.12□□□□□ -1.27
PDZRN4-203ENST00000539469 TTC12Q9H892 705 aaPredicted RBP7.12□□□□□ -1.27
PDZRN4-203ENST00000539469 ARMT1Q9H993 441 aa7.12□□□□□ -1.27
PDZRN4-203ENST00000539469 SNX14Q9Y5W7 946 aa7.12□□□□□ -1.27
PDZRN4-203ENST00000539469 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.12□□□□□ -1.27
PDZRN4-203ENST00000539469 FAM205AQ6ZU69 1335 aa7.12□□□□□ -1.27
PDZRN4-203ENST00000539469 PRKAB2O43741 272 aa7.12□□□□□ -1.27
PDZRN4-203ENST00000539469 DTNBO60941 627 aa7.12□□□□□ -1.27
PDZRN4-203ENST00000539469 CYP7A1P22680 504 aa7.12□□□□□ -1.27
PDZRN4-203ENST00000539469 DYNLL1P63167 89 aaKnown RBP7.12□□□□□ -1.27
PDZRN4-203ENST00000539469 ADCK5Q3MIX3 580 aa7.12□□□□□ -1.27
PDZRN4-203ENST00000539469 TTLL5Q6EMB2 1281 aa7.12□□□□□ -1.27
PDZRN4-203ENST00000539469 FAM43BQ6ZT52 329 aaPredicted RBP7.12□□□□□ -1.27
PDZRN4-203ENST00000539469 RIOK1Q9BRS2 568 aaKnown RBP7.12□□□□□ -1.27
PDZRN4-203ENST00000539469 TMX4Q9H1E5 349 aaPredicted RBP7.12□□□□□ -1.27
PDZRN4-203ENST00000539469 EPB41L4AQ9HCS5 686 aaPredicted RBP7.12□□□□□ -1.27
PDZRN4-203ENST00000539469 MYH1P12882 1939 aa7.12□□□□□ -1.27
PDZRN4-203ENST00000539469 SLC27A2O14975 620 aa7.11□□□□□ -1.27
PDZRN4-203ENST00000539469 PPIP5K2O43314 1243 aa7.11□□□□□ -1.27
PDZRN4-203ENST00000539469 SETQ01105 290 aaPredicted RBP7.11□□□□□ -1.27
PDZRN4-203ENST00000539469 RASSF7Q02833 373 aa7.11□□□□□ -1.27
PDZRN4-203ENST00000539469 EAPPQ56P03 285 aaPredicted RBP7.11□□□□□ -1.27
PDZRN4-203ENST00000539469 MFSD14BQ5SR56 506 aa7.11□□□□□ -1.27
PDZRN4-203ENST00000539469 CREB3L3Q68CJ9 461 aa7.11□□□□□ -1.27
PDZRN4-203ENST00000539469 GLYCTKQ8IVS8 523 aa7.11□□□□□ -1.27
PDZRN4-203ENST00000539469 STRBPQ96SI9 672 aaKnown RBP7.11□□□□□ -1.27
PDZRN4-203ENST00000539469 CCSER2Q9H7U1 834 aa7.11□□□□□ -1.27
PDZRN4-203ENST00000539469 BCS1LQ9Y276 419 aa7.11□□□□□ -1.27
PDZRN4-203ENST00000539469 C2orf72A6NCS6 295 aa7.11□□□□□ -1.27
PDZRN4-203ENST00000539469 USP17L3A6NCW0 530 aa7.11□□□□□ -1.27
PDZRN4-203ENST00000539469 USP17L4A6NCW7 530 aa7.11□□□□□ -1.27
PDZRN4-203ENST00000539469 CPA1P15085 419 aa7.11□□□□□ -1.27
PDZRN4-203ENST00000539469 NAA16Q6N069 864 aaPredicted RBP7.11□□□□□ -1.27
PDZRN4-203ENST00000539469 USP17L2Q6R6M4 530 aa7.11□□□□□ -1.27
PDZRN4-203ENST00000539469 USP17L1Q7RTZ2 530 aa7.11□□□□□ -1.27
PDZRN4-203ENST00000539469 RTKN2Q8IZC4 609 aa7.11□□□□□ -1.27
PDZRN4-203ENST00000539469 WDR66Q8TBY9 1149 aa7.11□□□□□ -1.27
PDZRN4-203ENST00000539469 STAG1Q8WVM7 1258 aa7.11□□□□□ -1.27
PDZRN4-203ENST00000539469 IL17RAQ96F46 866 aa7.11□□□□□ -1.27
PDZRN4-203ENST00000539469 DSCC1Q9BVC3 393 aa7.11□□□□□ -1.27
PDZRN4-203ENST00000539469 RPAP1Q9BWH6 1393 aaPredicted RBP7.11□□□□□ -1.27
PDZRN4-203ENST00000539469 SIPA1L1O43166 1804 aa7.11□□□□□ -1.27
PDZRN4-203ENST00000539469 SPTLC1O15269 473 aa7.11□□□□□ -1.27
PDZRN4-203ENST00000539469 EPB41L2O43491 1005 aaKnown RBP7.11□□□□□ -1.27
PDZRN4-203ENST00000539469 LDHBP07195 334 aaKnown RBP7.11□□□□□ -1.27
PDZRN4-203ENST00000539469 CYP21A2P08686 494 aa7.11□□□□□ -1.27
PDZRN4-203ENST00000539469 ZNF445P59923 1031 aa7.11□□□□□ -1.27
PDZRN4-203ENST00000539469 LRRFIP1Q32MZ4 808 aaKnown RBP7.11□□□□□ -1.27
PDZRN4-203ENST00000539469 ZFYVE27Q5T4F4 411 aa7.11□□□□□ -1.27
PDZRN4-203ENST00000539469 STOX1Q6ZVD7 989 aa7.11□□□□□ -1.27
PDZRN4-203ENST00000539469 FMNL3Q8IVF7 1028 aa7.11□□□□□ -1.27
PDZRN4-203ENST00000539469 AIDAQ96BJ3 306 aa7.11□□□□□ -1.27
PDZRN4-203ENST00000539469 NBPF3Q9H094 633 aa7.11□□□□□ -1.27
PDZRN4-203ENST00000539469 CUEDC1Q9NWM3 386 aaPredicted RBP7.11□□□□□ -1.27
PDZRN4-203ENST00000539469 PCDHGB7Q9Y5F8 929 aa7.11□□□□□ -1.27
PDZRN4-203ENST00000539469 F8W031 263 aaPredicted RBP7.1□□□□□ -1.27
PDZRN4-203ENST00000539469 SMIM22K7EJ46 135 aa7.1□□□□□ -1.27
PDZRN4-203ENST00000539469 HOXA2O43364 376 aa7.1□□□□□ -1.27
PDZRN4-203ENST00000539469 U2AF2P26368 475 aaKnown RBP eCLIP7.1□□□□□ -1.27
PDZRN4-203ENST00000539469 EVX2Q03828 476 aa7.1□□□□□ -1.27
PDZRN4-203ENST00000539469 MRPL58Q14197 206 aaKnown RBP7.1□□□□□ -1.27
PDZRN4-203ENST00000539469 DACT2Q5SW24 774 aa7.1□□□□□ -1.27
PDZRN4-203ENST00000539469 DZIP1Q86YF9 867 aaKnown RBP7.1□□□□□ -1.27
PDZRN4-203ENST00000539469 RPUSD2Q8IZ73 545 aaKnown RBP7.1□□□□□ -1.27
PDZRN4-203ENST00000539469 NKX2-3Q8TAU0 364 aa7.1□□□□□ -1.27
PDZRN4-203ENST00000539469 PXYLP1Q8TE99 480 aa7.1□□□□□ -1.27
PDZRN4-203ENST00000539469 SDR42E1Q8WUS8 393 aa7.1□□□□□ -1.27
PDZRN4-203ENST00000539469 AATFQ9NY61 560 aaKnown RBP eCLIP7.1□□□□□ -1.27
PDZRN4-203ENST00000539469 CGNQ9P2M7 1197 aaKnown RBP7.1□□□□□ -1.27
PDZRN4-203ENST00000539469 CCDC39Q9UFE4 941 aa7.1□□□□□ -1.27
PDZRN4-203ENST00000539469 PCDHAC2Q9Y5I4 1007 aa7.1□□□□□ -1.27
PDZRN4-203ENST00000539469 MAGEB6P1A0A0J9YX57 407 aa7.1□□□□□ -1.27
PDZRN4-203ENST00000539469 GSG1L2A8MUP6 293 aa7.1□□□□□ -1.27
PDZRN4-203ENST00000539469 USP17L15C9J2P7 530 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms