RNA–Protein interactions for RNA: ENST00000536513.5

ABCA4-207, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 1 (best) BASIC

Gene ABCA4, Length 3,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-207ENST00000536513 SLF2Q8IX21 1173 aa9.44□□□□□ -0.9
ABCA4-207ENST00000536513 STAG2Q8N3U4 1231 aa9.44□□□□□ -0.9
ABCA4-207ENST00000536513 CLIC6Q96NY7 704 aa9.44□□□□□ -0.9
ABCA4-207ENST00000536513 NUP88Q99567 741 aaPredicted RBP9.44□□□□□ -0.9
ABCA4-207ENST00000536513 PES1O00541 588 aaKnown RBP9.44□□□□□ -0.9
ABCA4-207ENST00000536513 PFKFB2O60825 505 aa9.44□□□□□ -0.9
ABCA4-207ENST00000536513 KIF20AO95235 890 aa9.44□□□□□ -0.9
ABCA4-207ENST00000536513 CTDNEP1O95476 244 aa9.44□□□□□ -0.9
ABCA4-207ENST00000536513 TAL1P17542 331 aaPredicted RBP9.44□□□□□ -0.9
ABCA4-207ENST00000536513 DIS3L2Q8IYB7 885 aaKnown RBP9.44□□□□□ -0.9
ABCA4-207ENST00000536513 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.44□□□□□ -0.9
ABCA4-207ENST00000536513 PRIMPOLQ96LW4 560 aa9.44□□□□□ -0.9
ABCA4-207ENST00000536513 CSRNP1Q96S65 589 aa9.44□□□□□ -0.9
ABCA4-207ENST00000536513 PPP1R9BQ96SB3 815 aa9.44□□□□□ -0.9
ABCA4-207ENST00000536513 PIM2Q9P1W9 311 aa9.44□□□□□ -0.9
ABCA4-207ENST00000536513 FAM205CA6NFA0 338 aa9.44□□□□□ -0.9
ABCA4-207ENST00000536513 SH2B2O14492 632 aaPredicted RBP9.44□□□□□ -0.9
ABCA4-207ENST00000536513 KINO60870 393 aaKnown RBP9.44□□□□□ -0.9
ABCA4-207ENST00000536513 DALRD3Q5D0E6 543 aaKnown RBP9.44□□□□□ -0.9
ABCA4-207ENST00000536513 DLK2Q6UY11 383 aa9.44□□□□□ -0.9
ABCA4-207ENST00000536513 FAM43BQ6ZT52 329 aaPredicted RBP9.44□□□□□ -0.9
ABCA4-207ENST00000536513 CCAR1Q8IX12 1150 aaKnown RBP9.44□□□□□ -0.9
ABCA4-207ENST00000536513 CLIC4Q9Y696 253 aa9.44□□□□□ -0.9
ABCA4-207ENST00000536513 NUP98P52948 1817 aa9.44□□□□□ -0.9
ABCA4-207ENST00000536513 GOLGA6L19H0YKK7 550 aa9.43□□□□□ -0.9
ABCA4-207ENST00000536513 VEGFAP15692 232 aaPredicted RBP9.43□□□□□ -0.9
ABCA4-207ENST00000536513 XBP1P17861 261 aa9.43□□□□□ -0.9
ABCA4-207ENST00000536513 MCM7P33993 719 aa9.43□□□□□ -0.9
ABCA4-207ENST00000536513 DMTNQ08495 405 aa9.43□□□□□ -0.9
ABCA4-207ENST00000536513 CFAP100Q494V2 611 aa9.43□□□□□ -0.9
ABCA4-207ENST00000536513 LRSAM1Q6UWE0 723 aa9.43□□□□□ -0.9
ABCA4-207ENST00000536513 PIK3AP1Q6ZUJ8 805 aa9.43□□□□□ -0.9
ABCA4-207ENST00000536513 LY9Q9HBG7 655 aa9.43□□□□□ -0.9
ABCA4-207ENST00000536513 BECN2A8MW95 431 aa9.43□□□□□ -0.9
ABCA4-207ENST00000536513 CDK8P49336 464 aa9.43□□□□□ -0.9
ABCA4-207ENST00000536513 TERF1P54274 439 aa9.43□□□□□ -0.9
ABCA4-207ENST00000536513 EXOSC10Q01780 885 aaKnown RBP9.43□□□□□ -0.9
ABCA4-207ENST00000536513 HS1BP3Q53T59 392 aa9.43□□□□□ -0.9
ABCA4-207ENST00000536513 JAKMIP3Q5VZ66 844 aa9.43□□□□□ -0.9
ABCA4-207ENST00000536513 OXER1Q8TDS5 423 aa9.43□□□□□ -0.9
ABCA4-207ENST00000536513 CRAMP1Q96RY5 1269 aa9.43□□□□□ -0.9
ABCA4-207ENST00000536513 COA1Q9GZY4 146 aa9.43□□□□□ -0.9
ABCA4-207ENST00000536513 HOMER2Q9NSB8 354 aa9.43□□□□□ -0.9
ABCA4-207ENST00000536513 PSMD14O00487 310 aa9.43□□□□□ -0.9
ABCA4-207ENST00000536513 TEX35Q5T0J7 233 aa9.43□□□□□ -0.9
ABCA4-207ENST00000536513 CC2D2BQ6DHV5 1058 aa9.43□□□□□ -0.9
ABCA4-207ENST00000536513 NLGN2Q8NFZ4 835 aa9.43□□□□□ -0.9
ABCA4-207ENST00000536513 PRMT6Q96LA8 375 aaPredicted RBP9.43□□□□□ -0.9
ABCA4-207ENST00000536513 USP54Q70EL1 1684 aa9.42□□□□□ -0.9
ABCA4-207ENST00000536513 SSBP05455 408 aaKnown RBP eCLIP9.42□□□□□ -0.9
ABCA4-207ENST00000536513 GPR162Q16538 588 aa9.42□□□□□ -0.9
ABCA4-207ENST00000536513 SKIDA1Q1XH10 827 aa9.42□□□□□ -0.9
ABCA4-207ENST00000536513 TBC1D22AQ8WUA7 517 aa9.42□□□□□ -0.9
ABCA4-207ENST00000536513 TMEM87BQ96K49 555 aa9.42□□□□□ -0.9
ABCA4-207ENST00000536513 ZNF396Q96N95 335 aaPredicted RBP9.42□□□□□ -0.9
ABCA4-207ENST00000536513 NUP62CLQ9H1M0 184 aa9.42□□□□□ -0.9
ABCA4-207ENST00000536513 DDX4Q9NQI0 724 aaKnown RBP9.42□□□□□ -0.9
ABCA4-207ENST00000536513 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.42□□□□□ -0.9
ABCA4-207ENST00000536513 V9GYY5 206 aaPredicted RBP9.42□□□□□ -0.9
ABCA4-207ENST00000536513 CCDC196A0A1B0GTZ2 297 aa9.42□□□□□ -0.9
ABCA4-207ENST00000536513 AKR1B1P15121 316 aa9.42□□□□□ -0.9
ABCA4-207ENST00000536513 MKRN3Q13064 507 aaKnown RBP9.42□□□□□ -0.9
ABCA4-207ENST00000536513 CCDC93Q567U6 631 aa9.42□□□□□ -0.9
ABCA4-207ENST00000536513 SOGA3Q5TF21 947 aa9.42□□□□□ -0.9
ABCA4-207ENST00000536513 CDAN1Q8IWY9 1227 aa9.42□□□□□ -0.9
ABCA4-207ENST00000536513 CPXCR1Q8N123 301 aa9.42□□□□□ -0.9
ABCA4-207ENST00000536513 CEP95Q96GE4 821 aa9.42□□□□□ -0.9
ABCA4-207ENST00000536513 SEC63Q9UGP8 760 aaKnown RBP9.42□□□□□ -0.9
ABCA4-207ENST00000536513 CFAP45Q9UL16 551 aa9.42□□□□□ -0.9
ABCA4-207ENST00000536513 CLEC11AQ9Y240 323 aa9.42□□□□□ -0.9
ABCA4-207ENST00000536513 CTDP1Q9Y5B0 961 aaPredicted RBP9.42□□□□□ -0.9
ABCA4-207ENST00000536513 MROH7-TTC4A0A0A0MT08 1334 aa9.42□□□□□ -0.9
ABCA4-207ENST00000536513 AFMP43652 599 aa9.42□□□□□ -0.9
ABCA4-207ENST00000536513 NAPAP54920 295 aa9.42□□□□□ -0.9
ABCA4-207ENST00000536513 EAPPQ56P03 285 aaPredicted RBP9.42□□□□□ -0.9
ABCA4-207ENST00000536513 WDR78Q5VTH9 848 aa9.42□□□□□ -0.9
ABCA4-207ENST00000536513 KLHL10Q6JEL2 608 aa9.42□□□□□ -0.9
ABCA4-207ENST00000536513 IGDCC4Q8TDY8 1250 aa9.42□□□□□ -0.9
ABCA4-207ENST00000536513 LEO1Q8WVC0 666 aaPredicted RBP9.42□□□□□ -0.9
ABCA4-207ENST00000536513 ATP8A2Q9NTI2 1148 aa9.42□□□□□ -0.9
ABCA4-207ENST00000536513 PKD2L1Q9P0L9 805 aa9.42□□□□□ -0.9
ABCA4-207ENST00000536513 SERPINB13Q9UIV8 391 aa9.42□□□□□ -0.9
ABCA4-207ENST00000536513 CRYBG1Q9Y4K1 1723 aa9.41□□□□□ -0.9
ABCA4-207ENST00000536513 FDPSP14324 419 aaKnown RBP9.41□□□□□ -0.9
ABCA4-207ENST00000536513 GTF2F1P35269 517 aaKnown RBP eCLIP9.41□□□□□ -0.9
ABCA4-207ENST00000536513 CDC42EP5Q6NZY7 148 aa9.41□□□□□ -0.9
ABCA4-207ENST00000536513 COA7Q96BR5 231 aa9.41□□□□□ -0.9
ABCA4-207ENST00000536513 TRAIPQ9BWF2 469 aa9.41□□□□□ -0.9
ABCA4-207ENST00000536513 BRMS1Q9HCU9 246 aa9.41□□□□□ -0.9
ABCA4-207ENST00000536513 ARPP21Q9UBL0 812 aaPredicted RBP9.41□□□□□ -0.9
ABCA4-207ENST00000536513 KIF28PB7ZC32 967 aa9.41□□□□□ -0.9
ABCA4-207ENST00000536513 MYO1BO43795 1136 aa9.41□□□□□ -0.9
ABCA4-207ENST00000536513 NR1I2O75469 434 aa9.41□□□□□ -0.9
ABCA4-207ENST00000536513 PTPN21Q16825 1174 aa9.41□□□□□ -0.9
ABCA4-207ENST00000536513 NOM1Q5C9Z4 860 aaKnown RBP9.41□□□□□ -0.9
ABCA4-207ENST00000536513 NBPF11Q86T75 865 aa9.41□□□□□ -0.9
ABCA4-207ENST00000536513 FCHSD1Q86WN1 690 aa9.41□□□□□ -0.9
ABCA4-207ENST00000536513 MYRIPQ8NFW9 859 aa9.41□□□□□ -0.9
ABCA4-207ENST00000536513 TIGD1Q96MW7 591 aa9.41□□□□□ -0.9
ABCA4-207ENST00000536513 TMEM39BQ9GZU3 492 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms