RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 SMIM22K7EJ46 135 aa18.29■□□□□ 0.52
CHMP1A-202ENST00000535997 DDAH1O94760 285 aa18.29■□□□□ 0.52
CHMP1A-202ENST00000535997 CTR9Q6PD62 1173 aa18.29■□□□□ 0.52
CHMP1A-202ENST00000535997 GRAMD1CQ8IYS0 662 aa18.29■□□□□ 0.52
CHMP1A-202ENST00000535997 SRRTQ9BXP5 876 aaKnown RBP18.29■□□□□ 0.52
CHMP1A-202ENST00000535997 BCL11BQ9C0K0 894 aaPredicted RBP18.29■□□□□ 0.52
CHMP1A-202ENST00000535997 DNAI1Q9UI46 699 aa18.29■□□□□ 0.52
CHMP1A-202ENST00000535997 DYNLL1P63167 89 aaKnown RBP18.28■□□□□ 0.52
CHMP1A-202ENST00000535997 NR1I3Q14994 352 aa18.28■□□□□ 0.52
CHMP1A-202ENST00000535997 SH3RF1Q7Z6J0 888 aa18.28■□□□□ 0.52
CHMP1A-202ENST00000535997 PKNOX2Q96KN3 472 aa18.28■□□□□ 0.52
CHMP1A-202ENST00000535997 MED15Q96RN5 788 aa18.28■□□□□ 0.52
CHMP1A-202ENST00000535997 PRDM4Q9UKN5 801 aa18.28■□□□□ 0.52
CHMP1A-202ENST00000535997 CACNA1SQ13698 1873 aa18.28■□□□□ 0.52
CHMP1A-202ENST00000535997 CICQ96RK0 1608 aaPredicted RBP18.28■□□□□ 0.52
CHMP1A-202ENST00000535997 WTIPA6NIX2 430 aaPredicted RBP18.28■□□□□ 0.52
CHMP1A-202ENST00000535997 ZNF827Q17R98 1081 aa18.28■□□□□ 0.52
CHMP1A-202ENST00000535997 HSP90AA4PQ58FG1 418 aa18.28■□□□□ 0.52
CHMP1A-202ENST00000535997 SLC10A5Q5PT55 438 aa18.28■□□□□ 0.52
CHMP1A-202ENST00000535997 FBXO33Q7Z6M2 555 aa18.28■□□□□ 0.52
CHMP1A-202ENST00000535997 EPSTI1Q96J88 318 aa18.28■□□□□ 0.52
CHMP1A-202ENST00000535997 GSDMAQ96QA5 445 aa18.28■□□□□ 0.52
CHMP1A-202ENST00000535997 CYP2D7A0A087X1C5 515 aa18.27■□□□□ 0.52
CHMP1A-202ENST00000535997 USP17L12C9JPN9 530 aa18.27■□□□□ 0.52
CHMP1A-202ENST00000535997 USP17L21D6R901 530 aa18.27■□□□□ 0.52
CHMP1A-202ENST00000535997 PLEKHA8P1O95397 391 aa18.27■□□□□ 0.52
CHMP1A-202ENST00000535997 EARS2Q5JPH6 523 aaKnown RBP18.27■□□□□ 0.52
CHMP1A-202ENST00000535997 FBXO38Q6PIJ6 1188 aa18.27■□□□□ 0.52
CHMP1A-202ENST00000535997 TC2NQ8N9U0 490 aa18.27■□□□□ 0.52
CHMP1A-202ENST00000535997 ZNF384Q8TF68 577 aa18.27■□□□□ 0.52
CHMP1A-202ENST00000535997 DHX58Q96C10 678 aa18.27■□□□□ 0.52
CHMP1A-202ENST00000535997 PPP2R2CQ9Y2T4 447 aa18.27■□□□□ 0.52
CHMP1A-202ENST00000535997 COL1A1P02452 1464 aaPredicted RBP18.27■□□□□ 0.52
CHMP1A-202ENST00000535997 FAM205CA6NFA0 338 aa18.26■□□□□ 0.51
CHMP1A-202ENST00000535997 RGL2O15211 777 aa18.26■□□□□ 0.51
CHMP1A-202ENST00000535997 ORC4O43929 436 aa18.26■□□□□ 0.51
CHMP1A-202ENST00000535997 PRDM1O75626 825 aa18.26■□□□□ 0.51
CHMP1A-202ENST00000535997 C3orf67Q6ZVT6 689 aa18.26■□□□□ 0.51
CHMP1A-202ENST00000535997 TMTC3Q6ZXV5 915 aa18.26■□□□□ 0.51
CHMP1A-202ENST00000535997 NSUN4Q96CB9 384 aaKnown RBP18.26■□□□□ 0.51
CHMP1A-202ENST00000535997 PAGE5Q96GU1 130 aa18.26■□□□□ 0.51
CHMP1A-202ENST00000535997 SAMSN1Q9NSI8 373 aaKnown RBP18.26■□□□□ 0.51
CHMP1A-202ENST00000535997 DUOX1Q9NRD9 1551 aa18.26■□□□□ 0.51
CHMP1A-202ENST00000535997 A0A1B0GTH6 734 aa18.26■□□□□ 0.51
CHMP1A-202ENST00000535997 GOLGA8FQ08AF8 430 aa18.26■□□□□ 0.51
CHMP1A-202ENST00000535997 GOLGA8DPQ0D2H9 430 aa18.26■□□□□ 0.51
CHMP1A-202ENST00000535997 ERCC6LQ2NKX8 1250 aa18.26■□□□□ 0.51
CHMP1A-202ENST00000535997 SPATA1Q5VX52 437 aa18.26■□□□□ 0.51
CHMP1A-202ENST00000535997 TMED8Q6PL24 325 aaPredicted RBP18.26■□□□□ 0.51
CHMP1A-202ENST00000535997 TRMT44Q8IYL2 757 aaKnown RBP18.26■□□□□ 0.51
CHMP1A-202ENST00000535997 TNFRSF25Q93038 417 aa18.26■□□□□ 0.51
CHMP1A-202ENST00000535997 BAZ2AQ9UIF9 1905 aaKnown RBP18.26■□□□□ 0.51
CHMP1A-202ENST00000535997 PDS5AQ29RF7 1337 aaKnown RBP18.26■□□□□ 0.51
CHMP1A-202ENST00000535997 A0A087X0B3 334 aa18.25■□□□□ 0.51
CHMP1A-202ENST00000535997 PTPN21Q16825 1174 aa18.25■□□□□ 0.51
CHMP1A-202ENST00000535997 CTCFLQ8NI51 663 aaPredicted RBP18.25■□□□□ 0.51
CHMP1A-202ENST00000535997 SYMPKQ92797 1274 aaKnown RBP18.25■□□□□ 0.51
CHMP1A-202ENST00000535997 ATP8A2Q9NTI2 1148 aa18.25■□□□□ 0.51
CHMP1A-202ENST00000535997 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.25■□□□□ 0.51
CHMP1A-202ENST00000535997 COL4A1P02462 1669 aa18.25■□□□□ 0.51
CHMP1A-202ENST00000535997 hCG_1642624A0A1W2PR95 340 aa18.25■□□□□ 0.51
CHMP1A-202ENST00000535997 NPY5RQ15761 445 aa18.25■□□□□ 0.51
CHMP1A-202ENST00000535997 KDM4FA0A1W2PPD8 638 aa18.24■□□□□ 0.51
CHMP1A-202ENST00000535997 VWA3AA6NCI4 1184 aa18.24■□□□□ 0.51
CHMP1A-202ENST00000535997 H2AFXP16104 143 aaPredicted RBP18.24■□□□□ 0.51
CHMP1A-202ENST00000535997 GTF2E1P29083 439 aaPredicted RBP18.24■□□□□ 0.51
CHMP1A-202ENST00000535997 TRAPPC10P48553 1259 aa18.24■□□□□ 0.51
CHMP1A-202ENST00000535997 DPYDQ12882 1025 aa18.24■□□□□ 0.51
CHMP1A-202ENST00000535997 FAM53CQ9NYF3 392 aa18.24■□□□□ 0.51
CHMP1A-202ENST00000535997 ADAMTS2O95450 1211 aa18.24■□□□□ 0.51
CHMP1A-202ENST00000535997 AFMP43652 599 aa18.24■□□□□ 0.51
CHMP1A-202ENST00000535997 ADKP55263 362 aaKnown RBP18.24■□□□□ 0.51
CHMP1A-202ENST00000535997 ATP2C1P98194 919 aaPredicted RBP18.24■□□□□ 0.51
CHMP1A-202ENST00000535997 MECOMQ03112 1051 aa18.24■□□□□ 0.51
CHMP1A-202ENST00000535997 CUL4BQ13620 913 aa18.24■□□□□ 0.51
CHMP1A-202ENST00000535997 TTC38Q5R3I4 469 aa18.24■□□□□ 0.51
CHMP1A-202ENST00000535997 CELF1Q92879 486 aaKnown RBP18.24■□□□□ 0.51
CHMP1A-202ENST00000535997 CTAGE1Q96RT6 745 aa18.24■□□□□ 0.51
CHMP1A-202ENST00000535997 PYM1Q9BRP8 204 aaKnown RBP18.24■□□□□ 0.51
CHMP1A-202ENST00000535997 CRNKL1Q9BZJ0 848 aaKnown RBP18.24■□□□□ 0.51
CHMP1A-202ENST00000535997 DCP1AQ9NPI6 582 aaPredicted RBP18.24■□□□□ 0.51
CHMP1A-202ENST00000535997 NPHP1O15259 732 aa18.23■□□□□ 0.51
CHMP1A-202ENST00000535997 RPS8P62241 208 aaKnown RBP18.23■□□□□ 0.51
CHMP1A-202ENST00000535997 PTGDRQ13258 359 aa18.23■□□□□ 0.51
CHMP1A-202ENST00000535997 ZNF174Q15697 407 aa18.23■□□□□ 0.51
CHMP1A-202ENST00000535997 BARGINQ6ZT62 677 aa18.23■□□□□ 0.51
CHMP1A-202ENST00000535997 SRBD1Q8N5C6 995 aaKnown RBP18.23■□□□□ 0.51
CHMP1A-202ENST00000535997 SPATA31A5Q5VU36 1347 aa18.23■□□□□ 0.51
CHMP1A-202ENST00000535997 SPATA31A7Q8IWB4 1347 aa18.23■□□□□ 0.51
CHMP1A-202ENST00000535997 AHDC1Q5TGY3 1603 aaPredicted RBP18.23■□□□□ 0.51
CHMP1A-202ENST00000535997 SBK1Q52WX2 424 aa18.23■□□□□ 0.51
CHMP1A-202ENST00000535997 APTXQ7Z2E3 356 aaKnown RBP18.23■□□□□ 0.51
CHMP1A-202ENST00000535997 KRT222Q8N1A0 295 aa18.23■□□□□ 0.51
CHMP1A-202ENST00000535997 IQUBQ8NA54 791 aa18.23■□□□□ 0.51
CHMP1A-202ENST00000535997 UBXN4Q92575 508 aa18.23■□□□□ 0.51
CHMP1A-202ENST00000535997 PANX2Q96RD6 677 aa18.23■□□□□ 0.51
CHMP1A-202ENST00000535997 CNTNAP5Q8WYK1 1306 aa18.22■□□□□ 0.51
CHMP1A-202ENST00000535997 ROBO1Q9Y6N7 1651 aa18.22■□□□□ 0.51
CHMP1A-202ENST00000535997 URI1O94763 535 aaPredicted RBP18.22■□□□□ 0.51
CHMP1A-202ENST00000535997 HIBADHP31937 336 aaKnown RBP18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms