RNA–Protein interactions for RNA: ENST00000535788.1

UBB-204, Transcript of ubiquitin B, humanhuman

TSL 2 BASIC

Gene UBB, Length 704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBB-204ENST00000535788 SF3A1Q15459 793 aaKnown RBP11.14□□□□□ -0.63
UBB-204ENST00000535788 TAF1CQ15572 869 aaPredicted RBP11.14□□□□□ -0.63
UBB-204ENST00000535788 NOL9Q5SY16 702 aaKnown RBP11.14□□□□□ -0.63
UBB-204ENST00000535788 MIGA1Q8NAN2 632 aa11.14□□□□□ -0.63
UBB-204ENST00000535788 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.14□□□□□ -0.63
UBB-204ENST00000535788 BRI3BPQ8WY22 251 aa11.14□□□□□ -0.63
UBB-204ENST00000535788 ARHGAP39Q9C0H5 1083 aa11.14□□□□□ -0.63
UBB-204ENST00000535788 DCTPP1Q9H773 170 aa11.14□□□□□ -0.63
UBB-204ENST00000535788 ZFYVE28Q9HCC9 887 aa11.14□□□□□ -0.63
UBB-204ENST00000535788 PLSCR2Q9NRY7 297 aa11.14□□□□□ -0.63
UBB-204ENST00000535788 PCDHB15Q9Y5E8 787 aa11.14□□□□□ -0.63
UBB-204ENST00000535788 DOCK1Q14185 1865 aa11.14□□□□□ -0.63
UBB-204ENST00000535788 FAM196BA6NMK8 535 aa11.13□□□□□ -0.63
UBB-204ENST00000535788 PHF20L1A8MW92 1017 aa11.13□□□□□ -0.63
UBB-204ENST00000535788 IRF6O14896 467 aa11.13□□□□□ -0.63
UBB-204ENST00000535788 TRIM66O15016 1216 aa11.13□□□□□ -0.63
UBB-204ENST00000535788 SH3BP5O60239 455 aa11.13□□□□□ -0.63
UBB-204ENST00000535788 DYNLL1P63167 89 aaKnown RBP11.13□□□□□ -0.63
UBB-204ENST00000535788 PPATQ06203 517 aa11.13□□□□□ -0.63
UBB-204ENST00000535788 SNAPC2Q13487 334 aa11.13□□□□□ -0.63
UBB-204ENST00000535788 MCM6Q14566 821 aa11.13□□□□□ -0.63
UBB-204ENST00000535788 TTF1Q15361 905 aaPredicted RBP11.13□□□□□ -0.63
UBB-204ENST00000535788 MAPKAPK5Q8IW41 473 aa11.13□□□□□ -0.63
UBB-204ENST00000535788 SCYL3Q8IZE3 742 aa11.13□□□□□ -0.63
UBB-204ENST00000535788 EDC3Q96F86 508 aaKnown RBP11.13□□□□□ -0.63
UBB-204ENST00000535788 BOLA2Q9H3K6 86 aa11.13□□□□□ -0.63
UBB-204ENST00000535788 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.13□□□□□ -0.632e-6■■■■■ 52.3
UBB-204ENST00000535788 FLT1P17948 1338 aa11.12□□□□□ -0.63
UBB-204ENST00000535788 SIPA1L1O43166 1804 aa11.12□□□□□ -0.63
UBB-204ENST00000535788 VCANP13611 3396 aa11.12□□□□□ -0.63
UBB-204ENST00000535788 TTC36A6NLP5 189 aa11.12□□□□□ -0.63
UBB-204ENST00000535788 NRDCO43847 1150 aa11.12□□□□□ -0.63
UBB-204ENST00000535788 CREB3O43889 395 aa11.12□□□□□ -0.63
UBB-204ENST00000535788 EVI5O60447 810 aa11.12□□□□□ -0.63
UBB-204ENST00000535788 CETPP11597 493 aa11.12□□□□□ -0.63
UBB-204ENST00000535788 ATP5JP18859 108 aa11.12□□□□□ -0.63
UBB-204ENST00000535788 MAP3K10Q02779 954 aa11.12□□□□□ -0.63
UBB-204ENST00000535788 KIF22Q14807 665 aa11.12□□□□□ -0.63
UBB-204ENST00000535788 TGFBRAP1Q8WUH2 860 aa11.12□□□□□ -0.63
UBB-204ENST00000535788 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.12□□□□□ -0.63
UBB-204ENST00000535788 PICK1Q9NRD5 415 aa11.12□□□□□ -0.63
UBB-204ENST00000535788 STXBP5LQ9Y2K9 1186 aa11.12□□□□□ -0.63
UBB-204ENST00000535788 A0A1W2PPC1 479 aa11.11□□□□□ -0.63
UBB-204ENST00000535788 TBC1D12O60347 775 aa11.11□□□□□ -0.63
UBB-204ENST00000535788 PDE6AP16499 860 aa11.11□□□□□ -0.63
UBB-204ENST00000535788 ZFYVE27Q5T4F4 411 aa11.11□□□□□ -0.63
UBB-204ENST00000535788 SLC9C2Q5TAH2 1124 aa11.11□□□□□ -0.63
UBB-204ENST00000535788 FAM43AQ8N2R8 423 aa11.11□□□□□ -0.63
UBB-204ENST00000535788 NKX2-3Q8TAU0 364 aa11.11□□□□□ -0.63
UBB-204ENST00000535788 HAUS7Q99871 368 aa11.11□□□□□ -0.63
UBB-204ENST00000535788 PAG1Q9NWQ8 432 aa11.11□□□□□ -0.63
UBB-204ENST00000535788 BIN2Q9UBW5 565 aaPredicted RBP11.11□□□□□ -0.63
UBB-204ENST00000535788 SAP30BPQ9UHR5 308 aaKnown RBP11.11□□□□□ -0.63
UBB-204ENST00000535788 ZNF532Q9HCE3 1301 aa11.1□□□□□ -0.63
UBB-204ENST00000535788 ATAD5Q96QE3 1844 aa11.1□□□□□ -0.63
UBB-204ENST00000535788 MYH1P12882 1939 aa11.1□□□□□ -0.63
UBB-204ENST00000535788 MAGEB6P1A0A0J9YX57 407 aa11.1□□□□□ -0.63
UBB-204ENST00000535788 BTBD19C9JJ37 291 aa11.1□□□□□ -0.63
UBB-204ENST00000535788 CTNND1O60716 968 aaKnown RBP11.1□□□□□ -0.63
UBB-204ENST00000535788 USP5P45974 858 aa11.1□□□□□ -0.63
UBB-204ENST00000535788 FOXD4Q12950 439 aaPredicted RBP11.1□□□□□ -0.63
UBB-204ENST00000535788 CCDC84Q86UT8 332 aaPredicted RBP11.1□□□□□ -0.63
UBB-204ENST00000535788 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.1□□□□□ -0.63
UBB-204ENST00000535788 GPATCH3Q96I76 525 aa11.1□□□□□ -0.63
UBB-204ENST00000535788 RNF208Q9H0X6 261 aa11.1□□□□□ -0.63
UBB-204ENST00000535788 DHX36Q9H2U1 1008 aaKnown RBP11.1□□□□□ -0.63
UBB-204ENST00000535788 ECHDC1Q9NTX5 307 aa11.1□□□□□ -0.63
UBB-204ENST00000535788 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.1□□□□□ -0.63
UBB-204ENST00000535788 PI4KBQ9UBF8 816 aa11.1□□□□□ -0.63
UBB-204ENST00000535788 HERC5Q9UII4 1024 aaKnown RBP11.1□□□□□ -0.63
UBB-204ENST00000535788 PALD1Q9ULE6 856 aa11.1□□□□□ -0.63
UBB-204ENST00000535788 KCNH4Q9UQ05 1017 aa11.1□□□□□ -0.63
UBB-204ENST00000535788 USTQ9Y2C2 406 aa11.1□□□□□ -0.63
UBB-204ENST00000535788 ZHX2Q9Y6X8 837 aa11.1□□□□□ -0.63
UBB-204ENST00000535788 NAV1Q8NEY1 1877 aa11.1□□□□□ -0.63
UBB-204ENST00000535788 DDX60LQ5H9U9 1706 aaKnown RBP11.09□□□□□ -0.63
UBB-204ENST00000535788 MYH7P12883 1935 aa11.09□□□□□ -0.63
UBB-204ENST00000535788 TCRBV5S4A2TA0A5A2 114 aa11.09□□□□□ -0.63
UBB-204ENST00000535788 PPFIA4O75335 1185 aa11.09□□□□□ -0.63
UBB-204ENST00000535788 HLA-DOAP06340 250 aa11.09□□□□□ -0.63
UBB-204ENST00000535788 CCL5P13501 91 aa11.09□□□□□ -0.63
UBB-204ENST00000535788 PTPRAP18433 802 aa11.09□□□□□ -0.63
UBB-204ENST00000535788 GJA8P48165 433 aa11.09□□□□□ -0.63
UBB-204ENST00000535788 LACTBP83111 547 aaPredicted RBP11.09□□□□□ -0.63
UBB-204ENST00000535788 RRP1BQ14684 758 aaKnown RBP11.09□□□□□ -0.63
UBB-204ENST00000535788 TSHZ3Q63HK5 1081 aa11.09□□□□□ -0.63
UBB-204ENST00000535788 GIMAP6Q6P9H5 292 aa11.09□□□□□ -0.63
UBB-204ENST00000535788 ZNF662Q6ZS27 426 aa11.09□□□□□ -0.63
UBB-204ENST00000535788 UBE2Q1Q7Z7E8 422 aa11.09□□□□□ -0.63
UBB-204ENST00000535788 CRACR2BQ8N4Y2 399 aaPredicted RBP11.09□□□□□ -0.63
UBB-204ENST00000535788 RIOK1Q9BRS2 568 aaKnown RBP11.09□□□□□ -0.63
UBB-204ENST00000535788 TRIM34Q9BYJ4 488 aa11.09□□□□□ -0.63
UBB-204ENST00000535788 MTMR10Q9NXD2 777 aa11.09□□□□□ -0.63
UBB-204ENST00000535788 ZSWIM8A7E2V4 1837 aa11.09□□□□□ -0.63
UBB-204ENST00000535788 PHIPQ8WWQ0 1821 aa11.09□□□□□ -0.63
UBB-204ENST00000535788 PTPRFP10586 1907 aa11.08□□□□□ -0.64
UBB-204ENST00000535788 CXCL11O14625 94 aa11.08□□□□□ -0.64
UBB-204ENST00000535788 FARP2O94887 1054 aaPredicted RBP11.08□□□□□ -0.64
UBB-204ENST00000535788 GJB1P08034 283 aa11.08□□□□□ -0.64
UBB-204ENST00000535788 ADD2P35612 726 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms