RNA–Protein interactions for RNA: ENST00000534406.1

SIPA1-210, Transcript of signal-induced proliferation-associated 1, humanhuman

TSL 3

Gene SIPA1, Length 351 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-210ENST00000534406 OTUD7BQ6GQQ9 843 aa28.66■■■□□ 2.18
SIPA1-210ENST00000534406 MFSD6Q6ZSS7 791 aa28.66■■■□□ 2.18
SIPA1-210ENST00000534406 CLEC10AQ8IUN9 316 aa28.66■■■□□ 2.18
SIPA1-210ENST00000534406 RBM8AQ9Y5S9 174 aaKnown RBP28.66■■■□□ 2.18
SIPA1-210ENST00000534406 TACC3Q9Y6A5 838 aa28.66■■■□□ 2.18
SIPA1-210ENST00000534406 USP17L10C9JJH3 530 aa28.65■■■□□ 2.18
SIPA1-210ENST00000534406 CA12O43570 354 aa28.65■■■□□ 2.18
SIPA1-210ENST00000534406 TSPY3P0CV98 308 aa28.65■■■□□ 2.18
SIPA1-210ENST00000534406 TSPY8P0CW00 308 aa28.65■■■□□ 2.18
SIPA1-210ENST00000534406 HSPA1AP0DMV8 641 aaKnown RBP28.65■■■□□ 2.18
SIPA1-210ENST00000534406 HSPA1BP0DMV9 641 aaKnown RBP28.65■■■□□ 2.18
SIPA1-210ENST00000534406 HMGCS2P54868 508 aa28.65■■■□□ 2.18
SIPA1-210ENST00000534406 BACE1P56817 501 aa28.65■■■□□ 2.18
SIPA1-210ENST00000534406 GADL1Q6ZQY3 521 aa28.65■■■□□ 2.18
SIPA1-210ENST00000534406 FASTKD5Q7L8L6 764 aaKnown RBP28.65■■■□□ 2.18
SIPA1-210ENST00000534406 PTPN18Q99952 460 aa28.65■■■□□ 2.18
SIPA1-210ENST00000534406 KANSL2Q9H9L4 492 aa28.65■■■□□ 2.18
SIPA1-210ENST00000534406 INCENPQ9NQS7 918 aa28.65■■■□□ 2.18
SIPA1-210ENST00000534406 TSPY2A6NKD2 308 aa28.64■■■□□ 2.18
SIPA1-210ENST00000534406 RANBP6O60518 1105 aaKnown RBP28.64■■■□□ 2.18
SIPA1-210ENST00000534406 ALDH1A1P00352 501 aa28.64■■■□□ 2.18
SIPA1-210ENST00000534406 MOGSQ13724 837 aa28.64■■■□□ 2.18
SIPA1-210ENST00000534406 FAM47AQ5JRC9 791 aa28.64■■■□□ 2.18
SIPA1-210ENST00000534406 RRP12Q5JTH9 1297 aaKnown RBP28.64■■■□□ 2.18
SIPA1-210ENST00000534406 GNL3Q9BVP2 549 aaKnown RBP eCLIP28.64■■■□□ 2.18
SIPA1-210ENST00000534406 SAGE1Q9NXZ1 904 aa28.64■■■□□ 2.18
SIPA1-210ENST00000534406 NEDD4P46934 1319 aa28.64■■■□□ 2.17
SIPA1-210ENST00000534406 C19orf81C9J6K1 198 aa28.63■■■□□ 2.17
SIPA1-210ENST00000534406 BTBD19C9JJ37 291 aa28.63■■■□□ 2.17
SIPA1-210ENST00000534406 TFAP4Q01664 338 aa28.63■■■□□ 2.17
SIPA1-210ENST00000534406 SH3D19Q5HYK7 790 aa28.63■■■□□ 2.17
SIPA1-210ENST00000534406 PROCA1Q8NCQ7 364 aaPredicted RBP28.63■■■□□ 2.17
SIPA1-210ENST00000534406 NEDD1Q8NHV4 660 aa28.63■■■□□ 2.17
SIPA1-210ENST00000534406 ACER1Q8TDN7 264 aa28.63■■■□□ 2.17
SIPA1-210ENST00000534406 ARHGEF10LQ9HCE6 1279 aa28.63■■■□□ 2.17
SIPA1-210ENST00000534406 ZCCHC17Q9NP64 241 aaKnown RBP28.63■■■□□ 2.17
SIPA1-210ENST00000534406 RNF186Q9NXI6 227 aa28.63■■■□□ 2.17
SIPA1-210ENST00000534406 TMOD4Q9NZQ9 345 aa28.63■■■□□ 2.17
SIPA1-210ENST00000534406 ANKRD23Q86SG2 305 aa28.62■■■□□ 2.17
SIPA1-210ENST00000534406 FAM43AQ8N2R8 423 aa28.62■■■□□ 2.17
SIPA1-210ENST00000534406 KIAA1683Q9H0B3 1180 aa28.62■■■□□ 2.17
SIPA1-210ENST00000534406 SH2D4AQ9H788 454 aa28.62■■■□□ 2.17
SIPA1-210ENST00000534406 MYH4Q9Y623 1939 aa28.61■■■□□ 2.17
SIPA1-210ENST00000534406 IGKV6D-41A0A0C4DH26 115 aa28.61■■■□□ 2.17
SIPA1-210ENST00000534406 CYP21A2P08686 494 aa28.61■■■□□ 2.17
SIPA1-210ENST00000534406 NT5C2P49902 561 aa28.61■■■□□ 2.17
SIPA1-210ENST00000534406 USP14P54578 494 aa28.61■■■□□ 2.17
SIPA1-210ENST00000534406 ZYXQ15942 572 aaKnown RBP28.61■■■□□ 2.17
SIPA1-210ENST00000534406 USP17L2Q6R6M4 530 aa28.61■■■□□ 2.17
SIPA1-210ENST00000534406 TRPA1O75762 1119 aa28.6■■■□□ 2.17
SIPA1-210ENST00000534406 ATP2B2Q01814 1243 aa28.6■■■□□ 2.17
SIPA1-210ENST00000534406 CNNM2Q9H8M5 875 aa28.6■■■□□ 2.17
SIPA1-210ENST00000534406 AGTPBP1Q9UPW5 1226 aa28.6■■■□□ 2.17
SIPA1-210ENST00000534406 A0A1W2PRG0 241 aa28.59■■■□□ 2.17
SIPA1-210ENST00000534406 REC8O95072 547 aa28.59■■■□□ 2.17
SIPA1-210ENST00000534406 EEF2P13639 858 aaKnown RBP28.59■■■□□ 2.17
SIPA1-210ENST00000534406 DGKZQ13574 1117 aa28.59■■■□□ 2.17
SIPA1-210ENST00000534406 GPAT2Q6NUI2 795 aa28.59■■■□□ 2.17
SIPA1-210ENST00000534406 ESR2Q92731 530 aa28.59■■■□□ 2.17
SIPA1-210ENST00000534406 CEP95Q96GE4 821 aa28.59■■■□□ 2.17
SIPA1-210ENST00000534406 PDHXO00330 501 aa28.58■■■□□ 2.17
SIPA1-210ENST00000534406 TAF1CQ15572 869 aaPredicted RBP28.58■■■□□ 2.17
SIPA1-210ENST00000534406 PPP4R3BQ5MIZ7 849 aa28.58■■■□□ 2.17
SIPA1-210ENST00000534406 SIAH1Q8IUQ4 282 aa28.58■■■□□ 2.17
SIPA1-210ENST00000534406 C12orf42Q96LP6 360 aa28.58■■■□□ 2.17
SIPA1-210ENST00000534406 KRT23Q9C075 422 aa28.58■■■□□ 2.17
SIPA1-210ENST00000534406 EMILIN3Q9NT22 766 aa28.58■■■□□ 2.17
SIPA1-210ENST00000534406 MTMR4Q9NYA4 1195 aa28.58■■■□□ 2.17
SIPA1-210ENST00000534406 NYAP2Q9P242 653 aa28.58■■■□□ 2.17
SIPA1-210ENST00000534406 TREML2Q5T2D2 321 aa28.57■■■□□ 2.16
SIPA1-210ENST00000534406 SLC45A1Q9Y2W3 748 aa28.57■■■□□ 2.16
SIPA1-210ENST00000534406 TMX2Q9Y320 296 aa28.57■■■□□ 2.16
SIPA1-210ENST00000534406 B4E1Z4 1266 aa28.56■■■□□ 2.16
SIPA1-210ENST00000534406 FOXN1O15353 648 aa28.56■■■□□ 2.16
SIPA1-210ENST00000534406 TTLL1O95922 423 aa28.56■■■□□ 2.16
SIPA1-210ENST00000534406 CFHR5Q9BXR6 569 aa28.56■■■□□ 2.16
SIPA1-210ENST00000534406 SLC27A2O14975 620 aa28.55■■■□□ 2.16
SIPA1-210ENST00000534406 TRDNQ13061 729 aa28.55■■■□□ 2.16
SIPA1-210ENST00000534406 PABPC4Q13310 644 aaKnown RBP eCLIP28.55■■■□□ 2.16
SIPA1-210ENST00000534406 CRHR2Q13324 411 aa28.55■■■□□ 2.16
SIPA1-210ENST00000534406 NECTIN1Q15223 517 aa28.55■■■□□ 2.16
SIPA1-210ENST00000534406 RNF20Q5VTR2 975 aa28.55■■■□□ 2.16
SIPA1-210ENST00000534406 CREB3L3Q68CJ9 461 aa28.55■■■□□ 2.16
SIPA1-210ENST00000534406 PARK7Q99497 189 aaKnown RBP28.55■■■□□ 2.16
SIPA1-210ENST00000534406 TSKSQ9UJT2 592 aa28.55■■■□□ 2.16
SIPA1-210ENST00000534406 NMT2O60551 498 aa28.54■■■□□ 2.16
SIPA1-210ENST00000534406 KDM4AO75164 1064 aa28.54■■■□□ 2.16
SIPA1-210ENST00000534406 CTCFP49711 727 aaPredicted RBP28.54■■■□□ 2.16
SIPA1-210ENST00000534406 LPAR1Q92633 364 aa28.54■■■□□ 2.16
SIPA1-210ENST00000534406 VCPKMTQ9H867 229 aa28.54■■■□□ 2.16
SIPA1-210ENST00000534406 ZFYVE28Q9HCC9 887 aa28.54■■■□□ 2.16
SIPA1-210ENST00000534406 GOPCQ9HD26 462 aa28.54■■■□□ 2.16
SIPA1-210ENST00000534406 CLIP2Q9UDT6 1046 aa28.54■■■□□ 2.16
SIPA1-210ENST00000534406 PNMA3Q9UL41 463 aa28.54■■■□□ 2.16
SIPA1-210ENST00000534406 TAF6LQ9Y6J9 622 aa28.54■■■□□ 2.16
SIPA1-210ENST00000534406 E7EWF7 191 aa28.53■■■□□ 2.16
SIPA1-210ENST00000534406 VCAM1P19320 739 aa28.53■■■□□ 2.16
SIPA1-210ENST00000534406 RALYLQ86SE5 291 aaKnown RBP28.53■■■□□ 2.16
SIPA1-210ENST00000534406 IL17RBQ9NRM6 502 aa28.53■■■□□ 2.16
SIPA1-210ENST00000534406 TCP11L1Q9NUJ3 509 aa28.53■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms