RNA–Protein interactions for RNA: ENST00000533761.5

CCDC90B-218, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 1,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-218ENST00000533761 NFIAQ12857 509 aa12.89□□□□□ -0.35
CCDC90B-218ENST00000533761 PICALMQ13492 652 aa12.89□□□□□ -0.35
CCDC90B-218ENST00000533761 RASA3Q14644 834 aa12.89□□□□□ -0.35
CCDC90B-218ENST00000533761 MAP1SQ66K74 1059 aaPredicted RBP12.89□□□□□ -0.35
CCDC90B-218ENST00000533761 DHX32Q7L7V1 743 aaKnown RBP12.89□□□□□ -0.35
CCDC90B-218ENST00000533761 FAM151AQ8WW52 585 aa12.89□□□□□ -0.35
CCDC90B-218ENST00000533761 SH2B1Q9NRF2 756 aaPredicted RBP12.89□□□□□ -0.35
CCDC90B-218ENST00000533761 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.89□□□□□ -0.35
CCDC90B-218ENST00000533761 LIMCH1Q9UPQ0 1083 aa12.89□□□□□ -0.35
CCDC90B-218ENST00000533761 SART3Q15020 963 aaKnown RBP12.88□□□□□ -0.35
CCDC90B-218ENST00000533761 ADCK5Q3MIX3 580 aa12.88□□□□□ -0.35
CCDC90B-218ENST00000533761 MFSD6Q6ZSS7 791 aa12.88□□□□□ -0.35
CCDC90B-218ENST00000533761 SMC1BQ8NDV3 1235 aa12.88□□□□□ -0.35
CCDC90B-218ENST00000533761 SDR42E1Q8WUS8 393 aa12.88□□□□□ -0.35
CCDC90B-218ENST00000533761 FAM198AQ9UFP1 575 aa12.88□□□□□ -0.35
CCDC90B-218ENST00000533761 POLR2AP24928 1970 aaKnown RBP12.88□□□□□ -0.35
CCDC90B-218ENST00000533761 LAMA4Q16363 1823 aa12.87□□□□□ -0.35
CCDC90B-218ENST00000533761 FOXP2O15409 715 aa12.87□□□□□ -0.35
CCDC90B-218ENST00000533761 PRKAB2O43741 272 aa12.87□□□□□ -0.35
CCDC90B-218ENST00000533761 HAND2P61296 217 aa12.87□□□□□ -0.35
CCDC90B-218ENST00000533761 PPARAQ07869 468 aa12.87□□□□□ -0.35
CCDC90B-218ENST00000533761 USP48Q86UV5 1035 aa12.87□□□□□ -0.35
CCDC90B-218ENST00000533761 MAPKAPK5Q8IW41 473 aa12.87□□□□□ -0.35
CCDC90B-218ENST00000533761 ZSCAN29Q8IWY8 852 aaPredicted RBP12.87□□□□□ -0.35
CCDC90B-218ENST00000533761 RBM46Q8TBY0 533 aaKnown RBP12.87□□□□□ -0.35
CCDC90B-218ENST00000533761 OSBPL5Q9H0X9 879 aaPredicted RBP12.87□□□□□ -0.35
CCDC90B-218ENST00000533761 DHX36Q9H2U1 1008 aaKnown RBP12.87□□□□□ -0.35
CCDC90B-218ENST00000533761 DCP1AQ9NPI6 582 aaPredicted RBP12.87□□□□□ -0.35
CCDC90B-218ENST00000533761 ANAPC4Q9UJX5 808 aa12.87□□□□□ -0.35
CCDC90B-218ENST00000533761 FLT1P17948 1338 aa12.87□□□□□ -0.35
CCDC90B-218ENST00000533761 AK2P54819 239 aa12.86□□□□□ -0.35
CCDC90B-218ENST00000533761 PDE4BQ07343 736 aa12.86□□□□□ -0.35
CCDC90B-218ENST00000533761 SUPT20HL1Q3ZLR7 823 aa12.86□□□□□ -0.35
CCDC90B-218ENST00000533761 SBK1Q52WX2 424 aa12.86□□□□□ -0.35
CCDC90B-218ENST00000533761 AKNAD1Q5T1N1 836 aa12.86□□□□□ -0.35
CCDC90B-218ENST00000533761 STAG1Q8WVM7 1258 aa12.86□□□□□ -0.35
CCDC90B-218ENST00000533761 HOOK2Q96ED9 719 aa12.86□□□□□ -0.35
CCDC90B-218ENST00000533761 INTS4Q96HW7 963 aaKnown RBP12.86□□□□□ -0.35
CCDC90B-218ENST00000533761 LRCH3Q96II8 777 aa12.86□□□□□ -0.35
CCDC90B-218ENST00000533761 TTC14Q96N46 770 aa12.86□□□□□ -0.35
CCDC90B-218ENST00000533761 MTA3Q9BTC8 594 aa12.86□□□□□ -0.35
CCDC90B-218ENST00000533761 GLIS2Q9BZE0 524 aaPredicted RBP12.86□□□□□ -0.35
CCDC90B-218ENST00000533761 TMEM39BQ9GZU3 492 aa12.86□□□□□ -0.35
CCDC90B-218ENST00000533761 CWC22Q9HCG8 908 aaKnown RBP12.86□□□□□ -0.35
CCDC90B-218ENST00000533761 EPB41L4AQ9HCS5 686 aaPredicted RBP12.86□□□□□ -0.35
CCDC90B-218ENST00000533761 DDX4Q9NQI0 724 aaKnown RBP12.86□□□□□ -0.35
CCDC90B-218ENST00000533761 MCM9Q9NXL9 1143 aa12.86□□□□□ -0.35
CCDC90B-218ENST00000533761 MKRN1Q9UHC7 482 aaKnown RBP12.86□□□□□ -0.35
CCDC90B-218ENST00000533761 SEPT9Q9UHD8 586 aaPredicted RBP12.86□□□□□ -0.35
CCDC90B-218ENST00000533761 SCAF8Q9UPN6 1271 aaKnown RBP12.86□□□□□ -0.35
CCDC90B-218ENST00000533761 PCDHGA10Q9Y5H3 936 aa12.86□□□□□ -0.35
CCDC90B-218ENST00000533761 CNTNAP1P78357 1384 aa12.86□□□□□ -0.35
CCDC90B-218ENST00000533761 ERICH2A1L162 156 aa12.86□□□□□ -0.35
CCDC90B-218ENST00000533761 MINDY4BA8MYZ0 360 aa12.86□□□□□ -0.35
CCDC90B-218ENST00000533761 TTC6Q86TZ1 520 aa12.86□□□□□ -0.35
CCDC90B-218ENST00000533761 FBXL16Q8N461 479 aa12.86□□□□□ -0.35
CCDC90B-218ENST00000533761 ESR2Q92731 530 aa12.86□□□□□ -0.35
CCDC90B-218ENST00000533761 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.86□□□□□ -0.35
CCDC90B-218ENST00000533761 ATRNL1Q5VV63 1379 aa12.85□□□□□ -0.35
CCDC90B-218ENST00000533761 ADM5C9JUS6 153 aa12.85□□□□□ -0.35
CCDC90B-218ENST00000533761 POLR3DP05423 398 aaPredicted RBP12.85□□□□□ -0.35
CCDC90B-218ENST00000533761 HLA-DOAP06340 250 aa12.85□□□□□ -0.35
CCDC90B-218ENST00000533761 NF2P35240 595 aa12.85□□□□□ -0.35
CCDC90B-218ENST00000533761 ZFPM1Q8IX07 1006 aa12.85□□□□□ -0.35
CCDC90B-218ENST00000533761 TMX3Q96JJ7 454 aa12.85□□□□□ -0.35
CCDC90B-218ENST00000533761 TMEM87BQ96K49 555 aa12.85□□□□□ -0.35
CCDC90B-218ENST00000533761 CSRNP1Q96S65 589 aa12.85□□□□□ -0.35
CCDC90B-218ENST00000533761 TOMM22Q9NS69 142 aa12.85□□□□□ -0.35
CCDC90B-218ENST00000533761 PI4KBQ9UBF8 816 aa12.85□□□□□ -0.35
CCDC90B-218ENST00000533761 CDK5RAP2Q96SN8 1893 aa12.84□□□□□ -0.35
CCDC90B-218ENST00000533761 COL2A1P02458 1487 aaPredicted RBP12.84□□□□□ -0.35
CCDC90B-218ENST00000533761 USP17L12C9JPN9 530 aa12.84□□□□□ -0.35
CCDC90B-218ENST00000533761 USP17L21D6R901 530 aa12.84□□□□□ -0.35
CCDC90B-218ENST00000533761 CD2BP2O95400 341 aaKnown RBP12.84□□□□□ -0.35
CCDC90B-218ENST00000533761 PDIA4P13667 645 aaKnown RBP12.84□□□□□ -0.35
CCDC90B-218ENST00000533761 SLC4A3P48751 1232 aa12.84□□□□□ -0.35
CCDC90B-218ENST00000533761 FSTL1Q12841 308 aa12.84□□□□□ -0.35
CCDC90B-218ENST00000533761 TMTC2Q8N394 836 aa12.84□□□□□ -0.35
CCDC90B-218ENST00000533761 TEPSINQ96N21 525 aa12.84□□□□□ -0.35
CCDC90B-218ENST00000533761 SAP30BPQ9UHR5 308 aaKnown RBP12.84□□□□□ -0.35
CCDC90B-218ENST00000533761 FOCADQ5VW36 1801 aa12.84□□□□□ -0.35
CCDC90B-218ENST00000533761 DDTLA6NHG4 134 aaPredicted RBP12.83□□□□□ -0.36
CCDC90B-218ENST00000533761 DHX16O60231 1041 aaKnown RBP12.83□□□□□ -0.36
CCDC90B-218ENST00000533761 TJAP1Q5JTD0 557 aa12.83□□□□□ -0.36
CCDC90B-218ENST00000533761 PRAMEF18Q5VWM3 479 aa12.83□□□□□ -0.36
CCDC90B-218ENST00000533761 PPP1R18Q6NYC8 613 aa12.83□□□□□ -0.36
CCDC90B-218ENST00000533761 CTR9Q6PD62 1173 aa12.83□□□□□ -0.36
CCDC90B-218ENST00000533761 Q6ZUG5 572 aa12.83□□□□□ -0.36
CCDC90B-218ENST00000533761 STOX1Q6ZVD7 989 aa12.83□□□□□ -0.36
CCDC90B-218ENST00000533761 IQCA1Q86XH1 822 aa12.83□□□□□ -0.36
CCDC90B-218ENST00000533761 FOXP4Q8IVH2 680 aaPredicted RBP12.83□□□□□ -0.36
CCDC90B-218ENST00000533761 CDCA5Q96FF9 252 aa12.83□□□□□ -0.36
CCDC90B-218ENST00000533761 UBAC1Q9BSL1 405 aa12.83□□□□□ -0.36
CCDC90B-218ENST00000533761 TRAF5O00463 557 aa12.82□□□□□ -0.36
CCDC90B-218ENST00000533761 PRC1O43663 620 aa12.82□□□□□ -0.36
CCDC90B-218ENST00000533761 PPP1R12BO60237 982 aaPredicted RBP12.82□□□□□ -0.36
CCDC90B-218ENST00000533761 EXOSC10Q01780 885 aaKnown RBP12.82□□□□□ -0.36
CCDC90B-218ENST00000533761 CCDC178Q5BJE1 867 aa12.82□□□□□ -0.36
CCDC90B-218ENST00000533761 NBPF12Q5TAG4 269 aaPredicted RBP12.82□□□□□ -0.36
CCDC90B-218ENST00000533761 DCAF15Q66K64 600 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 114.2 ms