RNA–Protein interactions for RNA: ENST00000530618.1

SSBP3-213, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 524 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-213ENST00000530618 COL11A1P12107 1806 aaPredicted RBP5.69□□□□□ -1.5
SSBP3-213ENST00000530618 GPR75-ASB3A0A0A6YYF3 556 aa5.69□□□□□ -1.5
SSBP3-213ENST00000530618 FAM196BA6NMK8 535 aa5.69□□□□□ -1.5
SSBP3-213ENST00000530618 CXCL11O14625 94 aa5.69□□□□□ -1.5
SSBP3-213ENST00000530618 NPM3O75607 178 aaKnown RBP5.69□□□□□ -1.5
SSBP3-213ENST00000530618 GNRH1P01148 92 aa5.69□□□□□ -1.5
SSBP3-213ENST00000530618 PCP11498 1178 aaKnown RBP5.69□□□□□ -1.5
SSBP3-213ENST00000530618 GSPT1P15170 499 aaKnown RBP5.69□□□□□ -1.5
SSBP3-213ENST00000530618 BTDP43251 543 aa5.69□□□□□ -1.5
SSBP3-213ENST00000530618 PSMC4P43686 418 aa5.69□□□□□ -1.5
SSBP3-213ENST00000530618 MNX1P50219 401 aaPredicted RBP5.69□□□□□ -1.5
SSBP3-213ENST00000530618 PRKCZQ05513 592 aa5.69□□□□□ -1.5
SSBP3-213ENST00000530618 TRDNQ13061 729 aa5.69□□□□□ -1.5
SSBP3-213ENST00000530618 SHROOM1Q2M3G4 852 aaPredicted RBP5.69□□□□□ -1.5
SSBP3-213ENST00000530618 PPP4R3BQ5MIZ7 849 aa5.69□□□□□ -1.5
SSBP3-213ENST00000530618 TREML2Q5T2D2 321 aa5.69□□□□□ -1.5
SSBP3-213ENST00000530618 CWC27Q6UX04 472 aaKnown RBP5.69□□□□□ -1.5
SSBP3-213ENST00000530618 TBC1D9Q6ZT07 1266 aa5.69□□□□□ -1.5
SSBP3-213ENST00000530618 TTC6Q86TZ1 520 aa5.69□□□□□ -1.5
SSBP3-213ENST00000530618 ZSCAN29Q8IWY8 852 aaPredicted RBP5.69□□□□□ -1.5
SSBP3-213ENST00000530618 SCYL3Q8IZE3 742 aa5.69□□□□□ -1.5
SSBP3-213ENST00000530618 NAPBQ9H115 298 aa5.69□□□□□ -1.5
SSBP3-213ENST00000530618 DHX36Q9H2U1 1008 aaKnown RBP5.69□□□□□ -1.5
SSBP3-213ENST00000530618 RNF41Q9H4P4 317 aaPredicted RBP5.69□□□□□ -1.5
SSBP3-213ENST00000530618 DNAJC18Q9H819 358 aa5.69□□□□□ -1.5
SSBP3-213ENST00000530618 ANO2Q9NQ90 1003 aa5.69□□□□□ -1.5
SSBP3-213ENST00000530618 PIH1D3Q9NQM4 214 aaKnown RBP5.69□□□□□ -1.5
SSBP3-213ENST00000530618 ATP8A2Q9NTI2 1148 aa5.69□□□□□ -1.5
SSBP3-213ENST00000530618 ARPP21Q9UBL0 812 aaPredicted RBP5.69□□□□□ -1.5
SSBP3-213ENST00000530618 SLC4A4Q9Y6R1 1079 aa5.69□□□□□ -1.5
SSBP3-213ENST00000530618 GREB1LQ9C091 1923 aaPredicted RBP5.69□□□□□ -1.5
SSBP3-213ENST00000530618 BAZ2AQ9UIF9 1905 aaKnown RBP5.69□□□□□ -1.5
SSBP3-213ENST00000530618 CCDC171Q6TFL3 1326 aa5.69□□□□□ -1.5
SSBP3-213ENST00000530618 MYPNQ86TC9 1320 aa5.69□□□□□ -1.5
SSBP3-213ENST00000530618 ZNF236Q9UL36 1845 aa5.69□□□□□ -1.5
SSBP3-213ENST00000530618 GPAA1O43292 621 aa5.68□□□□□ -1.5
SSBP3-213ENST00000530618 TBC1D12O60347 775 aa5.68□□□□□ -1.5
SSBP3-213ENST00000530618 ECM2O94769 699 aaPredicted RBP5.68□□□□□ -1.5
SSBP3-213ENST00000530618 MBD4O95243 580 aa5.68□□□□□ -1.5
SSBP3-213ENST00000530618 MYCP01106 439 aaPredicted RBP5.68□□□□□ -1.5
SSBP3-213ENST00000530618 POLR3DP05423 398 aaPredicted RBP5.68□□□□□ -1.5
SSBP3-213ENST00000530618 GJB1P08034 283 aa5.68□□□□□ -1.5
SSBP3-213ENST00000530618 CCL5P13501 91 aa5.68□□□□□ -1.5
SSBP3-213ENST00000530618 CHMLP26374 656 aa5.68□□□□□ -1.5
SSBP3-213ENST00000530618 GRK4P32298 578 aa5.68□□□□□ -1.5
SSBP3-213ENST00000530618 GJA8P48165 433 aa5.68□□□□□ -1.5
SSBP3-213ENST00000530618 PPP4CP60510 307 aa5.68□□□□□ -1.5
SSBP3-213ENST00000530618 KRT32Q14532 448 aa5.68□□□□□ -1.5
SSBP3-213ENST00000530618 IMMTQ16891 758 aaKnown RBP5.68□□□□□ -1.5
SSBP3-213ENST00000530618 ZMYM1Q5SVZ6 1142 aa5.68□□□□□ -1.5
SSBP3-213ENST00000530618 ADGRA1Q86SQ6 560 aa5.68□□□□□ -1.5
SSBP3-213ENST00000530618 METTL16Q86W50 562 aaKnown RBP5.68□□□□□ -1.5
SSBP3-213ENST00000530618 DSCC1Q9BVC3 393 aa5.68□□□□□ -1.5
SSBP3-213ENST00000530618 CRISPLD2Q9H0B8 497 aa5.68□□□□□ -1.5
SSBP3-213ENST00000530618 UNC93B1Q9H1C4 597 aa5.68□□□□□ -1.5
SSBP3-213ENST00000530618 ANTXR1Q9H6X2 564 aa5.68□□□□□ -1.5
SSBP3-213ENST00000530618 PAK6Q9NQU5 681 aaPredicted RBP5.68□□□□□ -1.5
SSBP3-213ENST00000530618 AATFQ9NY61 560 aaKnown RBP eCLIP5.68□□□□□ -1.5
SSBP3-213ENST00000530618 SLC45A1Q9Y2W3 748 aa5.68□□□□□ -1.5
SSBP3-213ENST00000530618 ZHX2Q9Y6X8 837 aa5.68□□□□□ -1.5
SSBP3-213ENST00000530618 PLXNA1Q9UIW2 1896 aa5.67□□□□□ -1.5
SSBP3-213ENST00000530618 PATL2C9JE40 543 aaKnown RBP5.67□□□□□ -1.5
SSBP3-213ENST00000530618 ZNF213O14771 459 aa5.67□□□□□ -1.5
SSBP3-213ENST00000530618 PEX10O60683 326 aa5.67□□□□□ -1.5
SSBP3-213ENST00000530618 CTNND1O60716 968 aaKnown RBP5.67□□□□□ -1.5
SSBP3-213ENST00000530618 ELNP15502 786 aa5.67□□□□□ -1.5
SSBP3-213ENST00000530618 PSMA5P28066 241 aa5.67□□□□□ -1.5
SSBP3-213ENST00000530618 FLT3LGP49771 235 aa5.67□□□□□ -1.5
SSBP3-213ENST00000530618 PDE4BQ07343 736 aa5.67□□□□□ -1.5
SSBP3-213ENST00000530618 NMIQ13287 307 aaPredicted RBP5.67□□□□□ -1.5
SSBP3-213ENST00000530618 IRF5Q13568 498 aa5.67□□□□□ -1.5
SSBP3-213ENST00000530618 SART3Q15020 963 aaKnown RBP5.67□□□□□ -1.5
SSBP3-213ENST00000530618 NBPF11Q86T75 865 aa5.67□□□□□ -1.5
SSBP3-213ENST00000530618 CRACR2BQ8N4Y2 399 aaPredicted RBP5.67□□□□□ -1.5
SSBP3-213ENST00000530618 MIGA1Q8NAN2 632 aa5.67□□□□□ -1.5
SSBP3-213ENST00000530618 U2AF1L4Q8WU68 220 aaKnown RBP5.67□□□□□ -1.5
SSBP3-213ENST00000530618 EDC3Q96F86 508 aaKnown RBP5.67□□□□□ -1.5
SSBP3-213ENST00000530618 PARK7Q99497 189 aaKnown RBP5.67□□□□□ -1.5
SSBP3-213ENST00000530618 ESYT1Q9BSJ8 1104 aa5.67□□□□□ -1.5
SSBP3-213ENST00000530618 TMEM106CQ9BVX2 250 aa5.67□□□□□ -1.5
SSBP3-213ENST00000530618 CNNM2Q9H8M5 875 aa5.67□□□□□ -1.5
SSBP3-213ENST00000530618 MCM9Q9NXL9 1143 aa5.67□□□□□ -1.5
SSBP3-213ENST00000530618 RBM27Q9P2N5 1060 aaKnown RBP5.67□□□□□ -1.5
SSBP3-213ENST00000530618 SWAP70Q9UH65 585 aa5.67□□□□□ -1.5
SSBP3-213ENST00000530618 GJD2Q9UKL4 321 aa5.67□□□□□ -1.5
SSBP3-213ENST00000530618 NDUFB9Q9Y6M9 179 aa5.67□□□□□ -1.5
SSBP3-213ENST00000530618 ZMYM6O95789 1325 aa5.67□□□□□ -1.5
SSBP3-213ENST00000530618 REV3LO60673 3130 aa5.67□□□□□ -1.5
SSBP3-213ENST00000530618 SMCHD1A6NHR9 2005 aa5.67□□□□□ -1.5
SSBP3-213ENST00000530618 TTC28Q96AY4 2481 aa5.67□□□□□ -1.5
SSBP3-213ENST00000530618 TCRBV5S4A2TA0A5A2 114 aa5.66□□□□□ -1.5
SSBP3-213ENST00000530618 ERICH2A1L162 156 aa5.66□□□□□ -1.5
SSBP3-213ENST00000530618 SOX1O00570 391 aaPredicted RBP5.66□□□□□ -1.5
SSBP3-213ENST00000530618 SGSM2O43147 1006 aa5.66□□□□□ -1.5
SSBP3-213ENST00000530618 SGPL1O95470 568 aa5.66□□□□□ -1.5
SSBP3-213ENST00000530618 INHAP05111 366 aa5.66□□□□□ -1.5
SSBP3-213ENST00000530618 HMGB1P09429 215 aaKnown RBP5.66□□□□□ -1.5
SSBP3-213ENST00000530618 TRIM32Q13049 653 aa5.66□□□□□ -1.5
SSBP3-213ENST00000530618 PICALMQ13492 652 aa5.66□□□□□ -1.5
SSBP3-213ENST00000530618 ARHGEF6Q15052 776 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms